RNA–Protein interactions for RNA: ENST00000481116.5

ABCF3-215, Transcript of ATP binding cassette subfamily F member 3, human

TSL 4

Gene ABCF3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCF3-215	ENST00000481116	TESK1	Q15569	626 aa		11.45	□□□□□ -0.58
ABCF3-215	ENST00000481116	LIN52	Q52LA3	116 aa		11.45	□□□□□ -0.58
ABCF3-215	ENST00000481116	STAC2	Q6ZMT1	411 aa		11.45	□□□□□ -0.58
ABCF3-215	ENST00000481116	NFKBID	Q8NI38	313 aa		11.45	□□□□□ -0.58
ABCF3-215	ENST00000481116	PMM1	Q92871	262 aa		11.45	□□□□□ -0.58
ABCF3-215	ENST00000481116	A4GALT	Q9NPC4	353 aa		11.45	□□□□□ -0.58
ABCF3-215	ENST00000481116	CALML5	Q9NZT1	146 aa		11.45	□□□□□ -0.58
ABCF3-215	ENST00000481116	ST6GALNAC2	Q9UJ37	374 aa		11.45	□□□□□ -0.58
ABCF3-215	ENST00000481116	OSGIN1	Q9UJX0	560 aa		11.45	□□□□□ -0.58
ABCF3-215	ENST00000481116	TMED7	Q9Y3B3	224 aa		11.45	□□□□□ -0.58
ABCF3-215	ENST00000481116	CELSR1	Q9NYQ6	3014 aa		11.45	□□□□□ -0.58
ABCF3-215	ENST00000481116	CCDC168	Q8NDH2	2452 aa		11.45	□□□□□ -0.58
ABCF3-215	ENST00000481116	MED13L	Q71F56	2210 aa		11.44	□□□□□ -0.58
ABCF3-215	ENST00000481116	TRBV5-3	A0A0A0MS03	114 aa		11.44	□□□□□ -0.58
ABCF3-215	ENST00000481116		A0A1W2PP18	115 aa		11.44	□□□□□ -0.58
ABCF3-215	ENST00000481116	ZC3H12D	A2A288	527 aa	Known RBP	11.44	□□□□□ -0.58
ABCF3-215	ENST00000481116	TMEM247	A6NEH6	219 aa		11.44	□□□□□ -0.58
ABCF3-215	ENST00000481116	DEFB108A	A8MXU0	73 aa		11.44	□□□□□ -0.58
ABCF3-215	ENST00000481116	ZNF814	B7Z6K7	855 aa		11.44	□□□□□ -0.58
ABCF3-215	ENST00000481116	FRS3	O43559	492 aa		11.44	□□□□□ -0.58
ABCF3-215	ENST00000481116	CYTIP	O60759	359 aa		11.44	□□□□□ -0.58
ABCF3-215	ENST00000481116	RAMP1	O60894	148 aa		11.44	□□□□□ -0.58
ABCF3-215	ENST00000481116	THBD	P07204	575 aa		11.44	□□□□□ -0.58
ABCF3-215	ENST00000481116	ARAF	P10398	606 aa		11.44	□□□□□ -0.58
ABCF3-215	ENST00000481116	BMP2	P12643	396 aa		11.44	□□□□□ -0.58
ABCF3-215	ENST00000481116	POLR2H	P52434	150 aa	Known RBP	11.44	□□□□□ -0.58
ABCF3-215	ENST00000481116	ART1	P52961	327 aa		11.44	□□□□□ -0.58
ABCF3-215	ENST00000481116	OR2B6	P58173	313 aa		11.44	□□□□□ -0.58
ABCF3-215	ENST00000481116	HOXC5	Q00444	222 aa		11.44	□□□□□ -0.58
ABCF3-215	ENST00000481116	BNIP2	Q12982	314 aa		11.44	□□□□□ -0.58
ABCF3-215	ENST00000481116	FADD	Q13158	208 aa		11.44	□□□□□ -0.58
ABCF3-215	ENST00000481116	ZNF311	Q5JNZ3	666 aa		11.44	□□□□□ -0.58
ABCF3-215	ENST00000481116	CGB2	Q6NT52	195 aa		11.44	□□□□□ -0.58
ABCF3-215	ENST00000481116	DLEU7	Q6UYE1	221 aa		11.44	□□□□□ -0.58
ABCF3-215	ENST00000481116	TFAP2E	Q6VUC0	442 aa		11.44	□□□□□ -0.58
ABCF3-215	ENST00000481116	BEND4	Q6ZU67	534 aa		11.44	□□□□□ -0.58
ABCF3-215	ENST00000481116	SERPINA11	Q86U17	422 aa		11.44	□□□□□ -0.58
ABCF3-215	ENST00000481116	RETREG3	Q86VR2	466 aa		11.44	□□□□□ -0.58
ABCF3-215	ENST00000481116	CXorf67	Q86X51	503 aa	Predicted RBP	11.44	□□□□□ -0.58
ABCF3-215	ENST00000481116	CCDC103	Q8IW40	242 aa		11.44	□□□□□ -0.58
ABCF3-215	ENST00000481116	SLC43A2	Q8N370	569 aa		11.44	□□□□□ -0.58
ABCF3-215	ENST00000481116	CADM2	Q8N3J6	435 aa		11.44	□□□□□ -0.58
ABCF3-215	ENST00000481116	SLC25A43	Q8WUT9	341 aa	Predicted RBP	11.44	□□□□□ -0.58
ABCF3-215	ENST00000481116	PIK3IP1	Q96FE7	263 aa		11.44	□□□□□ -0.58
ABCF3-215	ENST00000481116	SPATA9	Q9BWV2	254 aa		11.44	□□□□□ -0.58
ABCF3-215	ENST00000481116	TMEM120A	Q9BXJ8	343 aa		11.44	□□□□□ -0.58
ABCF3-215	ENST00000481116	ADAM19	Q9H013	955 aa		11.44	□□□□□ -0.58
ABCF3-215	ENST00000481116	RAD21L1	Q9H4I0	556 aa		11.44	□□□□□ -0.58
ABCF3-215	ENST00000481116	PLEKHF2	Q9H8W4	249 aa		11.44	□□□□□ -0.58
ABCF3-215	ENST00000481116	THUMPD1	Q9NXG2	353 aa	Known RBP	11.44	□□□□□ -0.58
ABCF3-215	ENST00000481116	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	11.44	□□□□□ -0.58
ABCF3-215	ENST00000481116	PRSS50	Q9UI38	385 aa		11.44	□□□□□ -0.58
ABCF3-215	ENST00000481116	SPIN1	Q9Y657	262 aa	Predicted RBP	11.44	□□□□□ -0.58
ABCF3-215	ENST00000481116	RAI1	Q7Z5J4	1906 aa	Predicted RBP	11.44	□□□□□ -0.58
ABCF3-215	ENST00000481116	PRRC2A	P48634	2157 aa	Known RBP	11.43	□□□□□ -0.58
ABCF3-215	ENST00000481116	C5orf58	C9J3I9	102 aa		11.43	□□□□□ -0.58
ABCF3-215	ENST00000481116	GCM2	O75603	506 aa	Predicted RBP	11.43	□□□□□ -0.58
ABCF3-215	ENST00000481116	PGM3	O95394	542 aa		11.43	□□□□□ -0.58
ABCF3-215	ENST00000481116	IMPDH2	P12268	514 aa		11.43	□□□□□ -0.58
ABCF3-215	ENST00000481116	CRYGS	P22914	178 aa		11.43	□□□□□ -0.58
ABCF3-215	ENST00000481116	SLC1A3	P43003	542 aa		11.43	□□□□□ -0.58
ABCF3-215	ENST00000481116	HTR3A	P46098	478 aa		11.43	□□□□□ -0.58
ABCF3-215	ENST00000481116	PCYT1A	P49585	367 aa		11.43	□□□□□ -0.58
ABCF3-215	ENST00000481116	CSNK2A1	P68400	391 aa	Predicted RBP	11.43	□□□□□ -0.58
ABCF3-215	ENST00000481116	GUCY1A3	Q02108	690 aa		11.43	□□□□□ -0.58
ABCF3-215	ENST00000481116	SELPLG	Q14242	412 aa		11.43	□□□□□ -0.58
ABCF3-215	ENST00000481116	LARS2	Q15031	903 aa	Known RBP	11.43	□□□□□ -0.58
ABCF3-215	ENST00000481116	GCNT6	Q5T4J0	391 aa		11.43	□□□□□ -0.58
ABCF3-215	ENST00000481116	RNF220	Q5VTB9	566 aa		11.43	□□□□□ -0.58
ABCF3-215	ENST00000481116	ALKBH2	Q6NS38	261 aa		11.43	□□□□□ -0.58
ABCF3-215	ENST00000481116	MTDH	Q86UE4	582 aa	Known RBP	11.43	□□□□□ -0.58
ABCF3-215	ENST00000481116	STK32C	Q86UX6	486 aa		11.43	□□□□□ -0.58
ABCF3-215	ENST00000481116	COMTD1	Q86VU5	262 aa		11.43	□□□□□ -0.58
ABCF3-215	ENST00000481116	ZNF440	Q8IYI8	595 aa		11.43	□□□□□ -0.58
ABCF3-215	ENST00000481116	BBS10	Q8TAM1	723 aa		11.43	□□□□□ -0.58
ABCF3-215	ENST00000481116	STON2	Q8WXE9	905 aa		11.43	□□□□□ -0.58
ABCF3-215	ENST00000481116	HS3ST6	Q96QI5	342 aa		11.43	□□□□□ -0.58
ABCF3-215	ENST00000481116	BCO1	Q9HAY6	547 aa		11.43	□□□□□ -0.58
ABCF3-215	ENST00000481116	FGFR1OP2	Q9NVK5	253 aa		11.43	□□□□□ -0.58
ABCF3-215	ENST00000481116	ZNF226	Q9NYT6	803 aa		11.43	□□□□□ -0.58
ABCF3-215	ENST00000481116	KLHL9	Q9P2J3	617 aa		11.43	□□□□□ -0.58
ABCF3-215	ENST00000481116	LEF1	Q9UJU2	399 aa	Predicted RBP	11.43	□□□□□ -0.58
ABCF3-215	ENST00000481116	ZNF232	Q9UNY5	417 aa		11.43	□□□□□ -0.58
ABCF3-215	ENST00000481116	IFT52	Q9Y366	437 aa		11.43	□□□□□ -0.58
ABCF3-215	ENST00000481116	DSCAM	O60469	2012 aa		11.43	□□□□□ -0.58
ABCF3-215	ENST00000481116	FAAH	O00519	579 aa		11.42	□□□□□ -0.58
ABCF3-215	ENST00000481116	PMS2P2	O95744	297 aa		11.42	□□□□□ -0.58
ABCF3-215	ENST00000481116	ADA	P00813	363 aa		11.42	□□□□□ -0.58
ABCF3-215	ENST00000481116	THBS1	P07996	1170 aa		11.42	□□□□□ -0.58
ABCF3-215	ENST00000481116	CXCR1	P25024	350 aa		11.42	□□□□□ -0.58
ABCF3-215	ENST00000481116	LOX	P28300	417 aa	Predicted RBP	11.42	□□□□□ -0.58
ABCF3-215	ENST00000481116	GLIPR1L2	Q4G1C9	344 aa		11.42	□□□□□ -0.58
ABCF3-215	ENST00000481116	RUNDC3A	Q59EK9	446 aa		11.42	□□□□□ -0.58
ABCF3-215	ENST00000481116	ABLIM2	Q6H8Q1	611 aa		11.42	□□□□□ -0.58
ABCF3-215	ENST00000481116	DHDDS	Q86SQ9	333 aa		11.42	□□□□□ -0.58
ABCF3-215	ENST00000481116	GABRG1	Q8N1C3	465 aa		11.42	□□□□□ -0.58
ABCF3-215	ENST00000481116	DDIT4L	Q96D03	193 aa		11.42	□□□□□ -0.58
ABCF3-215	ENST00000481116	CPPED1	Q9BRF8	314 aa	Predicted RBP	11.42	□□□□□ -0.58
ABCF3-215	ENST00000481116	ACTR6	Q9GZN1	396 aa		11.42	□□□□□ -0.58
ABCF3-215	ENST00000481116	RABEP2	Q9H5N1	569 aa		11.42	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms