RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 SDHAF3Q9NRP4 125 aa13.05□□□□□ -0.32
USP11-207ENST00000478596 ADPRHL2Q9NX46 363 aa13.05□□□□□ -0.32
USP11-207ENST00000478596 TUBA8Q9NY65 449 aaPredicted RBP13.05□□□□□ -0.32
USP11-207ENST00000478596 FLRT3Q9NZU0 649 aa13.05□□□□□ -0.32
USP11-207ENST00000478596 CNIH4Q9P003 139 aa13.05□□□□□ -0.32
USP11-207ENST00000478596 PPP4R1LQ9P1A2 415 aa13.05□□□□□ -0.32
USP11-207ENST00000478596 ZNF232Q9UNY5 417 aa13.05□□□□□ -0.32
USP11-207ENST00000478596 ZNF443Q9Y2A4 671 aaPredicted RBP13.05□□□□□ -0.32
USP11-207ENST00000478596 PRAMEF27A3QJZ7 478 aa13.04□□□□□ -0.32
USP11-207ENST00000478596 ARPC2O15144 300 aa13.04□□□□□ -0.32
USP11-207ENST00000478596 RRP9O43818 475 aaKnown RBP13.04□□□□□ -0.32
USP11-207ENST00000478596 NUDT14O95848 222 aa13.04□□□□□ -0.32
USP11-207ENST00000478596 UBL4AP11441 157 aa13.04□□□□□ -0.32
USP11-207ENST00000478596 DNASE1L1P49184 302 aa13.04□□□□□ -0.32
USP11-207ENST00000478596 AGFG1P52594 562 aaKnown RBP13.04□□□□□ -0.32
USP11-207ENST00000478596 VEZF1Q14119 521 aa13.04□□□□□ -0.32
USP11-207ENST00000478596 SF3B4Q15427 424 aaKnown RBP eCLIP13.04□□□□□ -0.32
USP11-207ENST00000478596 ZNF311Q5JNZ3 666 aa13.04□□□□□ -0.32
USP11-207ENST00000478596 TBCELQ5QJ74 424 aa13.04□□□□□ -0.32
USP11-207ENST00000478596 PACS2Q86VP3 889 aa13.04□□□□□ -0.32
USP11-207ENST00000478596 OR4K17Q8NGC6 315 aa13.04□□□□□ -0.32
USP11-207ENST00000478596 FAM110BQ8TC76 370 aa13.04□□□□□ -0.32
USP11-207ENST00000478596 SH3YL1Q96HL8 342 aaPredicted RBP13.04□□□□□ -0.32
USP11-207ENST00000478596 TPD52L3Q96J77 140 aa13.04□□□□□ -0.32
USP11-207ENST00000478596 NSMCE2Q96MF7 247 aa13.04□□□□□ -0.32
USP11-207ENST00000478596 CADM1Q9BY67 442 aaKnown RBP13.04□□□□□ -0.32
USP11-207ENST00000478596 REG4Q9BYZ8 158 aa13.04□□□□□ -0.32
USP11-207ENST00000478596 MUC13Q9H3R2 512 aa13.04□□□□□ -0.32
USP11-207ENST00000478596 ZNF703Q9H7S9 590 aaPredicted RBP13.04□□□□□ -0.32
USP11-207ENST00000478596 MTHFD2LQ9H903 347 aaPredicted RBP13.04□□□□□ -0.32
USP11-207ENST00000478596 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.04□□□□□ -0.32
USP11-207ENST00000478596 KLHL28Q9NXS3 571 aa13.04□□□□□ -0.32
USP11-207ENST00000478596 BOKQ9UMX3 212 aaPredicted RBP13.04□□□□□ -0.32
USP11-207ENST00000478596 IFT52Q9Y366 437 aa13.04□□□□□ -0.32
USP11-207ENST00000478596 DTNAQ9Y4J8 743 aa13.04□□□□□ -0.32
USP11-207ENST00000478596 WIF1Q9Y5W5 379 aa13.04□□□□□ -0.32
USP11-207ENST00000478596 CHCHD2Q9Y6H1 151 aaPredicted RBP13.04□□□□□ -0.32
USP11-207ENST00000478596 V9GYQ6 96 aa13.04□□□□□ -0.32
USP11-207ENST00000478596 MBD3L3A6NE82 208 aaPredicted RBP13.03□□□□□ -0.32
USP11-207ENST00000478596 CD8B2A6NJW9 211 aa13.03□□□□□ -0.32
USP11-207ENST00000478596 GSC2O15499 205 aa13.03□□□□□ -0.32
USP11-207ENST00000478596 ANGPTL1O95841 491 aa13.03□□□□□ -0.32
USP11-207ENST00000478596 SERPINA1P01009 418 aa13.03□□□□□ -0.32
USP11-207ENST00000478596 CSTAP01040 98 aa13.03□□□□□ -0.32
USP11-207ENST00000478596 PABPC4LP0CB38 370 aaKnown RBP13.03□□□□□ -0.32
USP11-207ENST00000478596 ETS2P15036 469 aa13.03□□□□□ -0.32
USP11-207ENST00000478596 GGT1P19440 569 aa13.03□□□□□ -0.32
USP11-207ENST00000478596 TBXA2RP21731 343 aa13.03□□□□□ -0.32
USP11-207ENST00000478596 GZMMP51124 257 aa13.03□□□□□ -0.32
USP11-207ENST00000478596 NR1H2P55055 460 aa13.03□□□□□ -0.32
USP11-207ENST00000478596 ATP5J2P56134 94 aa13.03□□□□□ -0.32
USP11-207ENST00000478596 FLOT2Q14254 428 aa13.03□□□□□ -0.32
USP11-207ENST00000478596 TOMM20Q15388 145 aa13.03□□□□□ -0.32
USP11-207ENST00000478596 GLYATQ6IB77 296 aa13.03□□□□□ -0.32
USP11-207ENST00000478596 SLC30A6Q6NXT4 461 aa13.03□□□□□ -0.32
USP11-207ENST00000478596 CYP2R1Q6VVX0 501 aa13.03□□□□□ -0.32
USP11-207ENST00000478596 PLEKHM3Q6ZWE6 761 aa13.03□□□□□ -0.32
USP11-207ENST00000478596 EIF3MQ7L2H7 374 aaKnown RBP13.03□□□□□ -0.32
USP11-207ENST00000478596 MARCH3Q86UD3 253 aa13.03□□□□□ -0.32
USP11-207ENST00000478596 VRK2Q86Y07 508 aa13.03□□□□□ -0.32
USP11-207ENST00000478596 SMYD1Q8NB12 490 aa13.03□□□□□ -0.32
USP11-207ENST00000478596 OR4C3Q8NH37 302 aa13.03□□□□□ -0.32
USP11-207ENST00000478596 MBD3L2Q8NHZ7 208 aaPredicted RBP13.03□□□□□ -0.32
USP11-207ENST00000478596 PAQR8Q8TEZ7 354 aa13.03□□□□□ -0.32
USP11-207ENST00000478596 RASSF5Q8WWW0 418 aa13.03□□□□□ -0.32
USP11-207ENST00000478596 LZICQ8WZA0 190 aa13.03□□□□□ -0.32
USP11-207ENST00000478596 PROX1Q92786 737 aa13.03□□□□□ -0.32
USP11-207ENST00000478596 DTNBP1Q96EV8 351 aa13.03□□□□□ -0.32
USP11-207ENST00000478596 RNF145Q96MT1 663 aa13.03□□□□□ -0.32
USP11-207ENST00000478596 PCDHAC1Q9H158 963 aa13.03□□□□□ -0.32
USP11-207ENST00000478596 CXorf56Q9H5V9 222 aa13.03□□□□□ -0.32
USP11-207ENST00000478596 HHATLQ9HCP6 504 aa13.03□□□□□ -0.32
USP11-207ENST00000478596 BCL2L10Q9HD36 194 aa13.03□□□□□ -0.32
USP11-207ENST00000478596 QPCTLQ9NXS2 382 aa13.03□□□□□ -0.32
USP11-207ENST00000478596 RPS6KA6Q9UK32 745 aa13.03□□□□□ -0.32
USP11-207ENST00000478596 SLC35A3Q9Y2D2 325 aa13.03□□□□□ -0.32
USP11-207ENST00000478596 GPC6Q9Y625 555 aaPredicted RBP13.03□□□□□ -0.32
USP11-207ENST00000478596 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.03□□□□□ -0.328e-13■■■■□ 25.9
USP11-207ENST00000478596 DSPPQ9NZW4 1301 aa13.03□□□□□ -0.32
USP11-207ENST00000478596 MGAM2Q2M2H8 2515 aa13.03□□□□□ -0.32
USP11-207ENST00000478596 PKD1L1Q8TDX9 2849 aa13.02□□□□□ -0.33
USP11-207ENST00000478596 CENPVL1A0A0U1RR11 272 aa13.02□□□□□ -0.33
USP11-207ENST00000478596 C2orf72A6NCS6 295 aa13.02□□□□□ -0.33
USP11-207ENST00000478596 SERINC4A6NH21 518 aa13.02□□□□□ -0.33
USP11-207ENST00000478596 AGAP5A6NIR3 686 aa13.02□□□□□ -0.33
USP11-207ENST00000478596 GNB5O14775 395 aa13.02□□□□□ -0.33
USP11-207ENST00000478596 HCRTR2O43614 444 aa13.02□□□□□ -0.33
USP11-207ENST00000478596 UGT2B17O75795 530 aa13.02□□□□□ -0.33
USP11-207ENST00000478596 THBS1P07996 1170 aa13.02□□□□□ -0.33
USP11-207ENST00000478596 NGFRP08138 427 aa13.02□□□□□ -0.33
USP11-207ENST00000478596 UBTFL6P0CB48 400 aaPredicted RBP13.02□□□□□ -0.33
USP11-207ENST00000478596 UQCRBP14927 111 aa13.02□□□□□ -0.33
USP11-207ENST00000478596 CASP3P42574 277 aa13.02□□□□□ -0.33
USP11-207ENST00000478596 SNTA1Q13424 505 aa13.02□□□□□ -0.33
USP11-207ENST00000478596 ZNF141Q15928 474 aa13.02□□□□□ -0.33
USP11-207ENST00000478596 CLEC12BQ2HXU8 276 aa13.02□□□□□ -0.33
USP11-207ENST00000478596 CYBRD1Q53TN4 286 aa13.02□□□□□ -0.33
USP11-207ENST00000478596 MRPL2Q5T653 305 aaKnown RBP13.02□□□□□ -0.33
USP11-207ENST00000478596 C1orf146Q5VVC0 180 aa13.02□□□□□ -0.33
USP11-207ENST00000478596 ZNF836Q6ZNA1 936 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms