RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 ITGA5P08648 1049 aa8.46□□□□□ -1.06
CCM2-210ENST00000478169 TFPIP10646 304 aa8.46□□□□□ -1.06
CCM2-210ENST00000478169 NTF4P34130 210 aa8.46□□□□□ -1.06
CCM2-210ENST00000478169 MAGEA8P43361 318 aa8.46□□□□□ -1.06
CCM2-210ENST00000478169 PHC1P78364 1004 aa8.46□□□□□ -1.06
CCM2-210ENST00000478169 TGFBR3Q03167 851 aa8.46□□□□□ -1.06
CCM2-210ENST00000478169 GPR68Q15743 365 aa8.46□□□□□ -1.06
CCM2-210ENST00000478169 SWI5Q1ZZU3 235 aa8.46□□□□□ -1.06
CCM2-210ENST00000478169 UGT3A2Q3SY77 523 aa8.46□□□□□ -1.06
CCM2-210ENST00000478169 EIF3MQ7L2H7 374 aaKnown RBP8.46□□□□□ -1.06
CCM2-210ENST00000478169 DDIASQ8IXT1 998 aa8.46□□□□□ -1.06
CCM2-210ENST00000478169 WDR31Q8NA23 367 aa8.46□□□□□ -1.06
CCM2-210ENST00000478169 CCDC63Q8NA47 563 aa8.46□□□□□ -1.06
CCM2-210ENST00000478169 C1orf162Q8NEQ5 155 aaPredicted RBP8.46□□□□□ -1.06
CCM2-210ENST00000478169 OIT3Q8WWZ8 545 aa8.46□□□□□ -1.06
CCM2-210ENST00000478169 COQ8BQ96D53 544 aa8.46□□□□□ -1.06
CCM2-210ENST00000478169 MSI2Q96DH6 328 aaKnown RBP8.46□□□□□ -1.06
CCM2-210ENST00000478169 PPP3R2Q96LZ3 170 aa8.46□□□□□ -1.06
CCM2-210ENST00000478169 PIMREGQ9BSJ6 248 aa8.46□□□□□ -1.06
CCM2-210ENST00000478169 CCDC106Q9BWC9 280 aa8.46□□□□□ -1.06
CCM2-210ENST00000478169 C1QTNF6Q9BXI9 259 aa8.46□□□□□ -1.06
CCM2-210ENST00000478169 MYOZ1Q9NP98 299 aaPredicted RBP8.46□□□□□ -1.06
CCM2-210ENST00000478169 PARPBPQ9NWS1 579 aa8.46□□□□□ -1.06
CCM2-210ENST00000478169 CHRNA9Q9UGM1 479 aa8.46□□□□□ -1.06
CCM2-210ENST00000478169 KCNE5Q9UJ90 142 aa8.46□□□□□ -1.06
CCM2-210ENST00000478169 MID2Q9UJV3 735 aa8.46□□□□□ -1.06
CCM2-210ENST00000478169 AMDHD2Q9Y303 409 aa8.46□□□□□ -1.06
CCM2-210ENST00000478169 HDGFL3Q9Y3E1 203 aa8.46□□□□□ -1.06
CCM2-210ENST00000478169 LOC390937A0A1W2PQ73 354 aa8.45□□□□□ -1.06
CCM2-210ENST00000478169 SLC35F4A4IF30 521 aa8.45□□□□□ -1.06
CCM2-210ENST00000478169 CFLARO15519 480 aa8.45□□□□□ -1.06
CCM2-210ENST00000478169 FCMRO60667 390 aa8.45□□□□□ -1.06
CCM2-210ENST00000478169 TRIM13O60858 407 aa8.45□□□□□ -1.06
CCM2-210ENST00000478169 UGT2B17O75795 530 aa8.45□□□□□ -1.06
CCM2-210ENST00000478169 PGRP06401 933 aa8.45□□□□□ -1.06
CCM2-210ENST00000478169 GUSBP08236 651 aa8.45□□□□□ -1.06
CCM2-210ENST00000478169 UBTFL6P0CB48 400 aaPredicted RBP8.45□□□□□ -1.06
CCM2-210ENST00000478169 MATN1P21941 496 aa8.45□□□□□ -1.06
CCM2-210ENST00000478169 NR4A2P43354 598 aa8.45□□□□□ -1.06
CCM2-210ENST00000478169 FOXG1P55316 489 aaPredicted RBP8.45□□□□□ -1.06
CCM2-210ENST00000478169 GGTLC2Q14390 218 aa8.45□□□□□ -1.06
CCM2-210ENST00000478169 PTGR1Q14914 329 aa8.45□□□□□ -1.06
CCM2-210ENST00000478169 MST1LQ2TV78 715 aa8.45□□□□□ -1.06
CCM2-210ENST00000478169 ARHGAP11BQ3KRB8 267 aa8.45□□□□□ -1.06
CCM2-210ENST00000478169 AP1ARQ63HQ0 302 aa8.45□□□□□ -1.06
CCM2-210ENST00000478169 GRINAQ7Z429 371 aa8.45□□□□□ -1.06
CCM2-210ENST00000478169 C10orf107Q8IVU9 208 aa8.45□□□□□ -1.06
CCM2-210ENST00000478169 ZNF540Q8NDQ6 660 aa8.45□□□□□ -1.06
CCM2-210ENST00000478169 OR52E4Q8NGH9 312 aa8.45□□□□□ -1.06
CCM2-210ENST00000478169 OR5D16Q8NGK9 328 aa8.45□□□□□ -1.06
CCM2-210ENST00000478169 TWIST2Q8WVJ9 160 aa8.45□□□□□ -1.06
CCM2-210ENST00000478169 ARL5BQ96KC2 179 aa8.45□□□□□ -1.06
CCM2-210ENST00000478169 PRR14Q9BWN1 585 aa8.45□□□□□ -1.06
CCM2-210ENST00000478169 GATA5Q9BWX5 397 aaPredicted RBP8.45□□□□□ -1.06
CCM2-210ENST00000478169 TXLNGYQ9BZA5 131 aa8.45□□□□□ -1.06
CCM2-210ENST00000478169 CHODLQ9H9P2 273 aa8.45□□□□□ -1.06
CCM2-210ENST00000478169 SLC17A5Q9NRA2 495 aa8.45□□□□□ -1.06
CCM2-210ENST00000478169 CTPS2Q9NRF8 586 aa8.45□□□□□ -1.06
CCM2-210ENST00000478169 UPB1Q9UBR1 384 aa8.45□□□□□ -1.06
CCM2-210ENST00000478169 TRAPPC4Q9Y296 219 aa8.45□□□□□ -1.06
CCM2-210ENST00000478169 SLC35A3Q9Y2D2 325 aa8.45□□□□□ -1.06
CCM2-210ENST00000478169 TRAF6Q9Y4K3 522 aa8.45□□□□□ -1.06
CCM2-210ENST00000478169 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.45□□□□□ -1.06
CCM2-210ENST00000478169 ATP6V1G2-DDX39BF2Z307 99 aa8.44□□□□□ -1.06
CCM2-210ENST00000478169 COPEO14579 308 aa8.44□□□□□ -1.06
CCM2-210ENST00000478169 PIP5K1BO14986 540 aa8.44□□□□□ -1.06
CCM2-210ENST00000478169 EIF1BO60739 113 aaKnown RBP8.44□□□□□ -1.06
CCM2-210ENST00000478169 PEX11AO75192 247 aa8.44□□□□□ -1.06
CCM2-210ENST00000478169 LY6HO94772 140 aa8.44□□□□□ -1.06
CCM2-210ENST00000478169 AGR2O95994 175 aa8.44□□□□□ -1.06
CCM2-210ENST00000478169 WNT11O96014 354 aa8.44□□□□□ -1.06
CCM2-210ENST00000478169 TGFAP01135 160 aa8.44□□□□□ -1.06
CCM2-210ENST00000478169 APEHP13798 732 aaKnown RBP8.44□□□□□ -1.06
CCM2-210ENST00000478169 PRPS1L1P21108 318 aa8.44□□□□□ -1.06
CCM2-210ENST00000478169 PAX7P23759 505 aa8.44□□□□□ -1.06
CCM2-210ENST00000478169 PGM1P36871 562 aa8.44□□□□□ -1.06
CCM2-210ENST00000478169 HTR3AP46098 478 aa8.44□□□□□ -1.06
CCM2-210ENST00000478169 PRPS1P60891 318 aa8.44□□□□□ -1.06
CCM2-210ENST00000478169 SNRPD2P62316 118 aaKnown RBP8.44□□□□□ -1.06
CCM2-210ENST00000478169 HBA1P69905 142 aa8.44□□□□□ -1.06
CCM2-210ENST00000478169 H3F3AP84243 136 aa8.44□□□□□ -1.06
CCM2-210ENST00000478169 SRSF2Q01130 221 aaKnown RBP8.44□□□□□ -1.06
CCM2-210ENST00000478169 ATP6AP1LQ52LC2 224 aa8.44□□□□□ -1.06
CCM2-210ENST00000478169 XKR7Q5GH72 579 aa8.44□□□□□ -1.06
CCM2-210ENST00000478169 IL17RELQ6ZVW7 336 aa8.44□□□□□ -1.06
CCM2-210ENST00000478169 C6orf120Q7Z4R8 191 aa8.44□□□□□ -1.06
CCM2-210ENST00000478169 ADGRG3Q86Y34 549 aa8.44□□□□□ -1.06
CCM2-210ENST00000478169 CCDC103Q8IW40 242 aa8.44□□□□□ -1.06
CCM2-210ENST00000478169 IFT20Q8IY31 132 aa8.44□□□□□ -1.06
CCM2-210ENST00000478169 RFLNBQ8N5W9 214 aa8.44□□□□□ -1.06
CCM2-210ENST00000478169 FAM71CQ8NEG0 241 aa8.44□□□□□ -1.06
CCM2-210ENST00000478169 OR5AK3PQ8NH89 298 aa8.44□□□□□ -1.06
CCM2-210ENST00000478169 ZNF563Q8TA94 476 aa8.44□□□□□ -1.06
CCM2-210ENST00000478169 FBXO17Q96EF6 278 aa8.44□□□□□ -1.06
CCM2-210ENST00000478169 BOD1Q96IK1 185 aa8.44□□□□□ -1.06
CCM2-210ENST00000478169 FOXN4Q96NZ1 517 aa8.44□□□□□ -1.06
CCM2-210ENST00000478169 SORCS2Q96PQ0 1159 aa8.44□□□□□ -1.06
CCM2-210ENST00000478169 NAA11Q9BSU3 229 aaPredicted RBP8.44□□□□□ -1.06
CCM2-210ENST00000478169 DUSP26Q9BV47 211 aa8.44□□□□□ -1.06
CCM2-210ENST00000478169 BHLHE41Q9C0J9 482 aaPredicted RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms