RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 IGHV1-18A0A0C4DH31 117 aa17.61■□□□□ 0.41
PDLIM1-202ENST00000477757 SERINC4A6NH21 518 aa17.61■□□□□ 0.41
PDLIM1-202ENST00000477757 H3BQF6 201 aa17.61■□□□□ 0.41
PDLIM1-202ENST00000477757 CRCPO75575 148 aa17.61■□□□□ 0.41
PDLIM1-202ENST00000477757 TFPIP10646 304 aa17.61■□□□□ 0.41
PDLIM1-202ENST00000477757 PGCP20142 388 aa17.61■□□□□ 0.41
PDLIM1-202ENST00000477757 LGALS3BPQ08380 585 aa17.61■□□□□ 0.41
PDLIM1-202ENST00000477757 PRR31Q5SQ13 230 aa17.61■□□□□ 0.41
PDLIM1-202ENST00000477757 PDZK1Q5T2W1 519 aa17.61■□□□□ 0.41
PDLIM1-202ENST00000477757 ADAMTS15Q8TE58 950 aa17.61■□□□□ 0.41
PDLIM1-202ENST00000477757 KATNB1Q9BVA0 655 aa17.61■□□□□ 0.41
PDLIM1-202ENST00000477757 NMUR2Q9GZQ4 415 aa17.61■□□□□ 0.41
PDLIM1-202ENST00000477757 LAT2Q9GZY6 243 aa17.61■□□□□ 0.41
PDLIM1-202ENST00000477757 SAP130Q9H0E3 1048 aa17.61■□□□□ 0.41
PDLIM1-202ENST00000477757 TNFRSF12AQ9NP84 129 aa17.61■□□□□ 0.41
PDLIM1-202ENST00000477757 UPB1Q9UBR1 384 aa17.61■□□□□ 0.41
PDLIM1-202ENST00000477757 FBXO9Q9UK97 447 aaPredicted RBP17.61■□□□□ 0.41
PDLIM1-202ENST00000477757 SLC9A8Q9Y2E8 581 aa17.61■□□□□ 0.41
PDLIM1-202ENST00000477757 HDGFL3Q9Y3E1 203 aa17.61■□□□□ 0.41
PDLIM1-202ENST00000477757 TRRAPQ9Y4A5 3859 aa17.61■□□□□ 0.41
PDLIM1-202ENST00000477757 KRT16P08779 473 aa17.6■□□□□ 0.41
PDLIM1-202ENST00000477757 OR4A8P0C604 315 aa17.6■□□□□ 0.41
PDLIM1-202ENST00000477757 MPGP29372 298 aa17.6■□□□□ 0.41
PDLIM1-202ENST00000477757 MAGEA8P43361 318 aa17.6■□□□□ 0.41
PDLIM1-202ENST00000477757 PDLIM3Q53GG5 364 aaPredicted RBP17.6■□□□□ 0.41
PDLIM1-202ENST00000477757 TSPO2Q5TGU0 170 aa17.6■□□□□ 0.41
PDLIM1-202ENST00000477757 FRMD7Q6ZUT3 714 aa17.6■□□□□ 0.41
PDLIM1-202ENST00000477757 CCDC103Q8IW40 242 aa17.6■□□□□ 0.41
PDLIM1-202ENST00000477757 OR56A1Q8NGH5 318 aa17.6■□□□□ 0.41
PDLIM1-202ENST00000477757 CLHC1Q8NHS4 586 aa17.6■□□□□ 0.41
PDLIM1-202ENST00000477757 ZNF418Q8TF45 676 aaPredicted RBP17.6■□□□□ 0.41
PDLIM1-202ENST00000477757 NEU4Q8WWR8 484 aaPredicted RBP17.6■□□□□ 0.41
PDLIM1-202ENST00000477757 MTERF3Q96E29 417 aa17.6■□□□□ 0.41
PDLIM1-202ENST00000477757 BOD1Q96IK1 185 aa17.6■□□□□ 0.41
PDLIM1-202ENST00000477757 ARL5BQ96KC2 179 aa17.6■□□□□ 0.41
PDLIM1-202ENST00000477757 SLC38A2Q96QD8 506 aa17.6■□□□□ 0.41
PDLIM1-202ENST00000477757 KCNS3Q9BQ31 491 aa17.6■□□□□ 0.41
PDLIM1-202ENST00000477757 CCDC106Q9BWC9 280 aa17.6■□□□□ 0.41
PDLIM1-202ENST00000477757 OBP2BQ9NPH6 170 aa17.6■□□□□ 0.41
PDLIM1-202ENST00000477757 GPATCH2Q9NW75 528 aa17.6■□□□□ 0.41
PDLIM1-202ENST00000477757 PARPBPQ9NWS1 579 aa17.6■□□□□ 0.41
PDLIM1-202ENST00000477757 CHRNA9Q9UGM1 479 aa17.6■□□□□ 0.41
PDLIM1-202ENST00000477757 FAF1Q9UNN5 650 aaPredicted RBP17.6■□□□□ 0.41
PDLIM1-202ENST00000477757 PCDHB14Q9Y5E9 798 aa17.6■□□□□ 0.41
PDLIM1-202ENST00000477757 FLVCR1Q9Y5Y0 555 aa17.6■□□□□ 0.41
PDLIM1-202ENST00000477757 PTGDR2Q9Y5Y4 395 aa17.6■□□□□ 0.41
PDLIM1-202ENST00000477757 CYP7B1O75881 506 aa17.59■□□□□ 0.41
PDLIM1-202ENST00000477757 ERCC1P07992 297 aaPredicted RBP17.59■□□□□ 0.41
PDLIM1-202ENST00000477757 APOBEC1P41238 236 aaKnown RBP17.59■□□□□ 0.41
PDLIM1-202ENST00000477757 TP53BP2Q13625 1128 aa17.59■□□□□ 0.41
PDLIM1-202ENST00000477757 RIN1Q13671 783 aa17.59■□□□□ 0.41
PDLIM1-202ENST00000477757 TRIP10Q15642 601 aa17.59■□□□□ 0.41
PDLIM1-202ENST00000477757 HIKESHIQ53FT3 197 aa17.59■□□□□ 0.41
PDLIM1-202ENST00000477757 TIFABQ6ZNK6 161 aa17.59■□□□□ 0.41
PDLIM1-202ENST00000477757 GLCCI1Q86VQ1 547 aa17.59■□□□□ 0.41
PDLIM1-202ENST00000477757 ZNF786Q8N393 782 aa17.59■□□□□ 0.41
PDLIM1-202ENST00000477757 B4DSR2 109 aa17.58■□□□□ 0.4
PDLIM1-202ENST00000477757 URI1O94763 535 aaPredicted RBP17.58■□□□□ 0.4
PDLIM1-202ENST00000477757 CRYAAP02489 173 aa17.58■□□□□ 0.4
PDLIM1-202ENST00000477757 UROSP10746 265 aa17.58■□□□□ 0.4
PDLIM1-202ENST00000477757 KHKP50053 298 aa17.58■□□□□ 0.4
PDLIM1-202ENST00000477757 HILS1P60008 231 aa17.58■□□□□ 0.4
PDLIM1-202ENST00000477757 H3F3AP84243 136 aa17.58■□□□□ 0.4
PDLIM1-202ENST00000477757 SLC7A5Q01650 507 aa17.58■□□□□ 0.4
PDLIM1-202ENST00000477757 CCNIQ14094 377 aa17.58■□□□□ 0.4
PDLIM1-202ENST00000477757 ZNF141Q15928 474 aa17.58■□□□□ 0.4
PDLIM1-202ENST00000477757 PSMA8Q8TAA3 256 aa17.58■□□□□ 0.4
PDLIM1-202ENST00000477757 SDF2Q99470 211 aa17.58■□□□□ 0.4
PDLIM1-202ENST00000477757 RBM4Q9BWF3 364 aaKnown RBP17.58■□□□□ 0.4
PDLIM1-202ENST00000477757 CTPS2Q9NRF8 586 aa17.58■□□□□ 0.4
PDLIM1-202ENST00000477757 BAIAP2L1Q9UHR4 511 aa17.58■□□□□ 0.4
PDLIM1-202ENST00000477757 KCNE5Q9UJ90 142 aa17.58■□□□□ 0.4
PDLIM1-202ENST00000477757 SPEF1Q9Y4P9 236 aa17.58■□□□□ 0.4
PDLIM1-202ENST00000477757 CENPVL1A0A0U1RR11 272 aa17.57■□□□□ 0.4
PDLIM1-202ENST00000477757 SLC28A1O00337 649 aa17.57■□□□□ 0.4
PDLIM1-202ENST00000477757 KLF11O14901 512 aa17.57■□□□□ 0.4
PDLIM1-202ENST00000477757 ANKRD28O15084 1053 aa17.57■□□□□ 0.4
PDLIM1-202ENST00000477757 CSTAP01040 98 aa17.57■□□□□ 0.4
PDLIM1-202ENST00000477757 GSTA1P08263 222 aa17.57■□□□□ 0.4
PDLIM1-202ENST00000477757 UBTFL6P0CB48 400 aaPredicted RBP17.57■□□□□ 0.4
PDLIM1-202ENST00000477757 DDX5P17844 614 aaKnown RBP17.57■□□□□ 0.4
PDLIM1-202ENST00000477757 SLC1A3P43003 542 aa17.57■□□□□ 0.4
PDLIM1-202ENST00000477757 ASMTP46597 345 aa17.57■□□□□ 0.4
PDLIM1-202ENST00000477757 CCT3P49368 545 aaKnown RBP17.57■□□□□ 0.4
PDLIM1-202ENST00000477757 CLK1P49759 484 aaKnown RBP17.57■□□□□ 0.4
PDLIM1-202ENST00000477757 NAA20P61599 178 aa17.57■□□□□ 0.4
PDLIM1-202ENST00000477757 RPL38P63173 70 aaKnown RBP17.57■□□□□ 0.4
PDLIM1-202ENST00000477757 USP43Q70EL4 1123 aa17.57■□□□□ 0.4
PDLIM1-202ENST00000477757 R3HCC1LQ7Z5L2 792 aaKnown RBP17.57■□□□□ 0.4
PDLIM1-202ENST00000477757 OR2T11Q8NH01 316 aa17.57■□□□□ 0.4
PDLIM1-202ENST00000477757 CCDC126Q96EE4 140 aa17.57■□□□□ 0.4
PDLIM1-202ENST00000477757 DNAJA3Q96EY1 480 aa17.57■□□□□ 0.4
PDLIM1-202ENST00000477757 OR11A1Q9GZK7 315 aa17.57■□□□□ 0.4
PDLIM1-202ENST00000477757 TRIM77I1YAP6 450 aa17.56■□□□□ 0.4
PDLIM1-202ENST00000477757 RGS9O75916 674 aaPredicted RBP17.56■□□□□ 0.4
PDLIM1-202ENST00000477757 NEFHP12036 1026 aa17.56■□□□□ 0.4
PDLIM1-202ENST00000477757 IFNGR1P15260 489 aa17.56■□□□□ 0.4
PDLIM1-202ENST00000477757 CREB1P16220 341 aa17.56■□□□□ 0.4
PDLIM1-202ENST00000477757 FKBP2P26885 142 aaKnown RBP17.56■□□□□ 0.4
PDLIM1-202ENST00000477757 ARFIP2P53365 341 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms