RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 KCTD20Q7Z5Y7 419 aa13.56□□□□□ -0.24
HDAC6-220ENST00000477528 NOXA1Q86UR1 476 aa13.56□□□□□ -0.24
HDAC6-220ENST00000477528 LINC01555Q8NAE3 123 aa13.56□□□□□ -0.24
HDAC6-220ENST00000477528 LSM14AQ8ND56 463 aaKnown RBP13.56□□□□□ -0.24
HDAC6-220ENST00000477528 MR1Q95460 341 aa13.56□□□□□ -0.24
HDAC6-220ENST00000477528 GTPBP2Q9BX10 602 aaKnown RBP13.56□□□□□ -0.24
HDAC6-220ENST00000477528 POTEKPQ9BYX7 375 aa13.56□□□□□ -0.24
HDAC6-220ENST00000477528 FXYD6Q9H0Q3 95 aa13.56□□□□□ -0.24
HDAC6-220ENST00000477528 NPAP1Q9NZP6 1156 aa13.56□□□□□ -0.24
HDAC6-220ENST00000477528 MRPL15Q9P015 296 aaKnown RBP13.56□□□□□ -0.24
HDAC6-220ENST00000477528 FTSJ1Q9UET6 329 aa13.56□□□□□ -0.24
HDAC6-220ENST00000477528 GALR3O60755 368 aaPredicted RBP13.56□□□□□ -0.24
HDAC6-220ENST00000477528 PCBP3P57721 371 aaKnown RBP13.56□□□□□ -0.24
HDAC6-220ENST00000477528 GALNTL5Q7Z4T8 443 aa13.56□□□□□ -0.24
HDAC6-220ENST00000477528 SLC35F3Q8IY50 421 aa13.56□□□□□ -0.24
HDAC6-220ENST00000477528 DDIT4LQ96D03 193 aa13.56□□□□□ -0.24
HDAC6-220ENST00000477528 KATNB1Q9BVA0 655 aa13.56□□□□□ -0.24
HDAC6-220ENST00000477528 C6orf106Q9H6K1 298 aaPredicted RBP13.56□□□□□ -0.24
HDAC6-220ENST00000477528 ISYNA1Q9NPH2 558 aa13.56□□□□□ -0.24
HDAC6-220ENST00000477528 INIPQ9NRY2 104 aa13.56□□□□□ -0.24
HDAC6-220ENST00000477528 A4GNTQ9UNA3 340 aa13.56□□□□□ -0.24
HDAC6-220ENST00000477528 LOC105369274A0A096LPK9 316 aa13.56□□□□□ -0.24
HDAC6-220ENST00000477528 LOC102723532A0A0G2JNH3 316 aa13.56□□□□□ -0.24
HDAC6-220ENST00000477528 YY2O15391 372 aa13.56□□□□□ -0.24
HDAC6-220ENST00000477528 CYB5AP00167 134 aa13.56□□□□□ -0.24
HDAC6-220ENST00000477528 HBQ1P09105 142 aa13.56□□□□□ -0.24
HDAC6-220ENST00000477528 OR1D4P47884 311 aa13.56□□□□□ -0.24
HDAC6-220ENST00000477528 EFR3AQ14156 821 aa13.56□□□□□ -0.24
HDAC6-220ENST00000477528 ZNF793Q6ZN11 406 aa13.56□□□□□ -0.24
HDAC6-220ENST00000477528 OR4N4Q8N0Y3 316 aa13.56□□□□□ -0.24
HDAC6-220ENST00000477528 OR4C15Q8NGM1 316 aa13.56□□□□□ -0.24
HDAC6-220ENST00000477528 PFN4Q8NHR9 129 aa13.56□□□□□ -0.24
HDAC6-220ENST00000477528 NT5CQ8TCD5 201 aa13.56□□□□□ -0.24
HDAC6-220ENST00000477528 SCGB3A2Q96PL1 93 aa13.56□□□□□ -0.24
HDAC6-220ENST00000477528 C7orf50Q9BRJ6 194 aaKnown RBP13.56□□□□□ -0.24
HDAC6-220ENST00000477528 DKKL1Q9UK85 242 aa13.56□□□□□ -0.24
HDAC6-220ENST00000477528 NTNG1Q9Y2I2 539 aa13.56□□□□□ -0.24
HDAC6-220ENST00000477528 TRIM64CA6NLI5 447 aa13.55□□□□□ -0.24
HDAC6-220ENST00000477528 ZNF208O43345 1280 aa13.55□□□□□ -0.24
HDAC6-220ENST00000477528 GATBO75879 557 aaKnown RBP13.55□□□□□ -0.24
HDAC6-220ENST00000477528 PCMT1P22061 227 aa13.55□□□□□ -0.24
HDAC6-220ENST00000477528 RBM34P42696 430 aaKnown RBP13.55□□□□□ -0.24
HDAC6-220ENST00000477528 PATE1Q8WXA2 126 aa13.55□□□□□ -0.24
HDAC6-220ENST00000477528 MCOLN1Q9GZU1 580 aa13.55□□□□□ -0.24
HDAC6-220ENST00000477528 SLC25A18Q9H1K4 315 aa13.55□□□□□ -0.24
HDAC6-220ENST00000477528 SLC38A1Q9H2H9 487 aa13.55□□□□□ -0.24
HDAC6-220ENST00000477528 ATP13A2Q9NQ11 1180 aa13.55□□□□□ -0.24
HDAC6-220ENST00000477528 NUDT15Q9NV35 164 aa13.55□□□□□ -0.24
HDAC6-220ENST00000477528 A0A087WV62 115 aa13.55□□□□□ -0.24
HDAC6-220ENST00000477528 CDHR4A6H8M9 788 aa13.55□□□□□ -0.24
HDAC6-220ENST00000477528 TVP23AA6NH52 213 aa13.55□□□□□ -0.24
HDAC6-220ENST00000477528 NOTOA8MTQ0 251 aa13.55□□□□□ -0.24
HDAC6-220ENST00000477528 DRD3P35462 400 aa13.55□□□□□ -0.24
HDAC6-220ENST00000477528 ADGRF3Q8IZF5 1079 aa13.55□□□□□ -0.24
HDAC6-220ENST00000477528 OR13C3Q8NGS6 347 aa13.55□□□□□ -0.24
HDAC6-220ENST00000477528 ABHD4Q8TB40 342 aa13.55□□□□□ -0.24
HDAC6-220ENST00000477528 GHSRQ92847 366 aa13.55□□□□□ -0.24
HDAC6-220ENST00000477528 WBP1LQ9NX94 342 aa13.55□□□□□ -0.24
HDAC6-220ENST00000477528 FARSAQ9Y285 508 aaKnown RBP13.55□□□□□ -0.24
HDAC6-220ENST00000477528 HTR3EA5X5Y0 456 aa13.55□□□□□ -0.24
HDAC6-220ENST00000477528 CAPZA1P52907 286 aa13.55□□□□□ -0.24
HDAC6-220ENST00000477528 SIRPAP78324 504 aa13.55□□□□□ -0.24
HDAC6-220ENST00000477528 MRPS10P82664 201 aaKnown RBP13.55□□□□□ -0.24
HDAC6-220ENST00000477528 E2F1Q01094 437 aa13.55□□□□□ -0.24
HDAC6-220ENST00000477528 FAM69BQ5VUD6 431 aa13.55□□□□□ -0.24
HDAC6-220ENST00000477528 C12orf73Q69YU5 71 aa13.55□□□□□ -0.24
HDAC6-220ENST00000477528 DPY19L2P2Q6ZN68 376 aa13.55□□□□□ -0.24
HDAC6-220ENST00000477528 SLC16A12Q6ZSM3 486 aa13.55□□□□□ -0.24
HDAC6-220ENST00000477528 TIGD4Q8IY51 512 aa13.55□□□□□ -0.24
HDAC6-220ENST00000477528 CADM3Q8N126 398 aa13.55□□□□□ -0.24
HDAC6-220ENST00000477528 ZNF283Q8N7M2 679 aa13.55□□□□□ -0.24
HDAC6-220ENST00000477528 SLC2A12Q8TD20 617 aa13.55□□□□□ -0.24
HDAC6-220ENST00000477528 TBC1D24Q9ULP9 559 aa13.55□□□□□ -0.24
HDAC6-220ENST00000477528 V9GY05 133 aa13.55□□□□□ -0.24
HDAC6-220ENST00000477528 DICER1Q9UPY3 1922 aaKnown RBP13.55□□□□□ -0.24
HDAC6-220ENST00000477528 OR14I1A6ND48 311 aa13.55□□□□□ -0.24
HDAC6-220ENST00000477528 NAP1L6A6NFF2 107 aa13.55□□□□□ -0.24
HDAC6-220ENST00000477528 A6NIZ1 184 aa13.55□□□□□ -0.24
HDAC6-220ENST00000477528 M0R233 179 aa13.55□□□□□ -0.24
HDAC6-220ENST00000477528 APEX1P27695 318 aaKnown RBP13.55□□□□□ -0.24
HDAC6-220ENST00000477528 PBX2P40425 430 aa13.55□□□□□ -0.24
HDAC6-220ENST00000477528 RAP1BP61224 184 aa13.55□□□□□ -0.24
HDAC6-220ENST00000477528 RAP1AP62834 184 aa13.55□□□□□ -0.24
HDAC6-220ENST00000477528 SNTA1Q13424 505 aa13.55□□□□□ -0.24
HDAC6-220ENST00000477528 KCNJ8Q15842 424 aa13.55□□□□□ -0.24
HDAC6-220ENST00000477528 C9orf50Q5SZB4 431 aa13.55□□□□□ -0.24
HDAC6-220ENST00000477528 GPR32P1Q8NGA4 272 aa13.55□□□□□ -0.24
HDAC6-220ENST00000477528 TM9SF4Q92544 642 aa13.55□□□□□ -0.24
HDAC6-220ENST00000477528 RSC1A1Q92681 617 aa13.55□□□□□ -0.24
HDAC6-220ENST00000477528 HINT3Q9NQE9 182 aaKnown RBP13.55□□□□□ -0.24
HDAC6-220ENST00000477528 WDR81Q562E7 1941 aa13.54□□□□□ -0.24
HDAC6-220ENST00000477528 ZNF236Q9UL36 1845 aa13.54□□□□□ -0.24
HDAC6-220ENST00000477528 MEGF11A6BM72 1044 aa13.54□□□□□ -0.24
HDAC6-220ENST00000477528 C5orf51A6NDU8 294 aa13.54□□□□□ -0.24
HDAC6-220ENST00000477528 TLCD2A6NGC4 264 aa13.54□□□□□ -0.24
HDAC6-220ENST00000477528 CREBL2O60519 120 aaPredicted RBP13.54□□□□□ -0.24
HDAC6-220ENST00000477528 S100GP29377 79 aa13.54□□□□□ -0.24
HDAC6-220ENST00000477528 GNG2P59768 71 aa13.54□□□□□ -0.24
HDAC6-220ENST00000477528 TDGQ13569 410 aa13.54□□□□□ -0.24
HDAC6-220ENST00000477528 TATDN3Q17R31 274 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms