RNA–Protein interactions for RNA: ENST00000476972.6

GMDS-204, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-204ENST00000476972 VRK2Q86Y07 508 aa16.98■□□□□ 0.31
GMDS-204ENST00000476972 SLC25A43Q8WUT9 341 aaPredicted RBP16.98■□□□□ 0.31
GMDS-204ENST00000476972 WFIKKN1Q96NZ8 548 aa16.98■□□□□ 0.31
GMDS-204ENST00000476972 RAD21L1Q9H4I0 556 aa16.98■□□□□ 0.31
GMDS-204ENST00000476972 C12orf49Q9H741 205 aa16.98■□□□□ 0.31
GMDS-204ENST00000476972 NPHS2Q9NP85 383 aa16.98■□□□□ 0.31
GMDS-204ENST00000476972 THUMPD1Q9NXG2 353 aaKnown RBP16.98■□□□□ 0.31
GMDS-204ENST00000476972 KLHL28Q9NXS3 571 aa16.98■□□□□ 0.31
GMDS-204ENST00000476972 C6orf203Q9P0P8 240 aaPredicted RBP16.98■□□□□ 0.31
GMDS-204ENST00000476972 KLHL13Q9P2N7 655 aa16.98■□□□□ 0.31
GMDS-204ENST00000476972 CHRNA9Q9UGM1 479 aa16.98■□□□□ 0.31
GMDS-204ENST00000476972 JMJD1CQ15652 2540 aa16.98■□□□□ 0.31
GMDS-204ENST00000476972 NUDT7P0C024 238 aa16.97■□□□□ 0.31
GMDS-204ENST00000476972 FADDQ13158 208 aa16.97■□□□□ 0.31
GMDS-204ENST00000476972 LIN52Q52LA3 116 aa16.97■□□□□ 0.31
GMDS-204ENST00000476972 PAGE3Q5JUK9 113 aa16.97■□□□□ 0.31
GMDS-204ENST00000476972 ZNF836Q6ZNA1 936 aa16.97■□□□□ 0.31
GMDS-204ENST00000476972 ZNF550Q7Z398 422 aa16.97■□□□□ 0.31
GMDS-204ENST00000476972 LSRQ86X29 649 aaPredicted RBP16.97■□□□□ 0.31
GMDS-204ENST00000476972 OR52P1PQ8NH57 321 aa16.97■□□□□ 0.31
GMDS-204ENST00000476972 MAL2Q969L2 176 aa16.97■□□□□ 0.31
GMDS-204ENST00000476972 A4GALTQ9NPC4 353 aa16.97■□□□□ 0.31
GMDS-204ENST00000476972 RLIMQ9NVW2 624 aa16.97■□□□□ 0.31
GMDS-204ENST00000476972 TMEM45AQ9NWC5 275 aa16.97■□□□□ 0.31
GMDS-204ENST00000476972 SLAMF8Q9P0V8 285 aa16.97■□□□□ 0.31
GMDS-204ENST00000476972 ZNF443Q9Y2A4 671 aaPredicted RBP16.97■□□□□ 0.31
GMDS-204ENST00000476972 SPIN1Q9Y657 262 aaPredicted RBP16.97■□□□□ 0.31
GMDS-204ENST00000476972 CDHR4A6H8M9 788 aa16.96■□□□□ 0.31
GMDS-204ENST00000476972 TMEM247A6NEH6 219 aa16.96■□□□□ 0.31
GMDS-204ENST00000476972 CFAP73A6NFT4 308 aa16.96■□□□□ 0.31
GMDS-204ENST00000476972 C16orf97H3BN30 126 aa16.96■□□□□ 0.31
GMDS-204ENST00000476972 SMAD9O15198 467 aaKnown RBP16.96■□□□□ 0.31
GMDS-204ENST00000476972 SIAH2O43255 324 aa16.96■□□□□ 0.31
GMDS-204ENST00000476972 PRKD3O94806 890 aa16.96■□□□□ 0.31
GMDS-204ENST00000476972 BMP2P12643 396 aa16.96■□□□□ 0.31
GMDS-204ENST00000476972 DIO1P49895 249 aa16.96■□□□□ 0.31
GMDS-204ENST00000476972 EPS8Q12929 822 aa16.96■□□□□ 0.31
GMDS-204ENST00000476972 TMEM201Q5SNT2 666 aa16.96■□□□□ 0.31
GMDS-204ENST00000476972 TMPPEQ6ZT21 453 aa16.96■□□□□ 0.31
GMDS-204ENST00000476972 P3H2Q8IVL5 708 aa16.96■□□□□ 0.31
GMDS-204ENST00000476972 TUSC5Q8IXB3 177 aa16.96■□□□□ 0.31
GMDS-204ENST00000476972 SLC43A2Q8N370 569 aa16.96■□□□□ 0.31
GMDS-204ENST00000476972 MED18Q9BUE0 208 aa16.96■□□□□ 0.31
GMDS-204ENST00000476972 KLHL4Q9C0H6 718 aa16.96■□□□□ 0.31
GMDS-204ENST00000476972 ZNF385DQ9H6B1 395 aa16.96■□□□□ 0.31
GMDS-204ENST00000476972 GP6Q9HCN6 339 aa16.96■□□□□ 0.31
GMDS-204ENST00000476972 VAPAQ9P0L0 249 aa16.96■□□□□ 0.31
GMDS-204ENST00000476972 TRBV5-3A0A0A0MS03 114 aa16.95■□□□□ 0.3
GMDS-204ENST00000476972 A0A0G2JND7 137 aa16.95■□□□□ 0.3
GMDS-204ENST00000476972 A0A0G2JPF8 293 aa16.95■□□□□ 0.3
GMDS-204ENST00000476972 DEFB108AA8MXU0 73 aa16.95■□□□□ 0.3
GMDS-204ENST00000476972 HNRNPCL2B2RXH8 293 aa16.95■□□□□ 0.3
GMDS-204ENST00000476972 HNRNPCL3B7ZW38 293 aa16.95■□□□□ 0.3
GMDS-204ENST00000476972 FAAHO00519 579 aa16.95■□□□□ 0.3
GMDS-204ENST00000476972 HNRNPCL1O60812 293 aaKnown RBP16.95■□□□□ 0.3
GMDS-204ENST00000476972 SMPD2O60906 423 aa16.95■□□□□ 0.3
GMDS-204ENST00000476972 LY6G6DO95868 133 aa16.95■□□□□ 0.3
GMDS-204ENST00000476972 HEXAP06865 529 aa16.95■□□□□ 0.3
GMDS-204ENST00000476972 FESP07332 822 aa16.95■□□□□ 0.3
GMDS-204ENST00000476972 THBS1P07996 1170 aa16.95■□□□□ 0.3
GMDS-204ENST00000476972 HNRNPCL4P0DMR1 293 aa16.95■□□□□ 0.3
GMDS-204ENST00000476972 TFPIP10646 304 aa16.95■□□□□ 0.3
GMDS-204ENST00000476972 NCF2P19878 526 aaPredicted RBP16.95■□□□□ 0.3
GMDS-204ENST00000476972 Q5PR19 223 aa16.95■□□□□ 0.3
GMDS-204ENST00000476972 RNF220Q5VTB9 566 aa16.95■□□□□ 0.3
GMDS-204ENST00000476972 NUFIP2Q7Z417 695 aaKnown RBP16.95■□□□□ 0.3
GMDS-204ENST00000476972 STK32CQ86UX6 486 aa16.95■□□□□ 0.3
GMDS-204ENST00000476972 ADGRG3Q86Y34 549 aa16.95■□□□□ 0.3
GMDS-204ENST00000476972 ZNF440Q8IYI8 595 aa16.95■□□□□ 0.3
GMDS-204ENST00000476972 C10orf111Q8N326 155 aa16.95■□□□□ 0.3
GMDS-204ENST00000476972 CIARTQ8N365 385 aaPredicted RBP16.95■□□□□ 0.3
GMDS-204ENST00000476972 PIGTQ969N2 578 aa16.95■□□□□ 0.3
GMDS-204ENST00000476972 DNAJA3Q96EY1 480 aa16.95■□□□□ 0.3
GMDS-204ENST00000476972 ARL5BQ96KC2 179 aa16.95■□□□□ 0.3
GMDS-204ENST00000476972 PSD2Q9BQI7 771 aa16.95■□□□□ 0.3
GMDS-204ENST00000476972 SIKE1Q9BRV8 207 aa16.95■□□□□ 0.3
GMDS-204ENST00000476972 OR11A1Q9GZK7 315 aa16.95■□□□□ 0.3
GMDS-204ENST00000476972 RABEP2Q9H5N1 569 aa16.95■□□□□ 0.3
GMDS-204ENST00000476972 KLHL9Q9P2J3 617 aa16.95■□□□□ 0.3
GMDS-204ENST00000476972 ING1Q9UK53 422 aaPredicted RBP16.95■□□□□ 0.3
GMDS-204ENST00000476972 TMED7-TICAM2A0A0A6YYA0 188 aa16.94■□□□□ 0.3
GMDS-204ENST00000476972 A0A1W2PP18 115 aa16.94■□□□□ 0.3
GMDS-204ENST00000476972 SULT2B1O00204 365 aa16.94■□□□□ 0.3
GMDS-204ENST00000476972 CYTIPO60759 359 aa16.94■□□□□ 0.3
GMDS-204ENST00000476972 YES1P07947 543 aa16.94■□□□□ 0.3
GMDS-204ENST00000476972 GKN3PP0CG01 181 aa16.94■□□□□ 0.3
GMDS-204ENST00000476972 UQCRBP14927 111 aa16.94■□□□□ 0.3
GMDS-204ENST00000476972 CCNA2P20248 432 aa16.94■□□□□ 0.3
GMDS-204ENST00000476972 HTR3AP46098 478 aa16.94■□□□□ 0.3
GMDS-204ENST00000476972 POLR2HP52434 150 aaKnown RBP16.94■□□□□ 0.3
GMDS-204ENST00000476972 CSNK2A1P68400 391 aaPredicted RBP16.94■□□□□ 0.3
GMDS-204ENST00000476972 LARS2Q15031 903 aaKnown RBP16.94■□□□□ 0.3
GMDS-204ENST00000476972 ACKR1Q16570 336 aa16.94■□□□□ 0.3
GMDS-204ENST00000476972 GCNT6Q5T4J0 391 aa16.94■□□□□ 0.3
GMDS-204ENST00000476972 PRAMEF8Q5VWM4 474 aa16.94■□□□□ 0.3
GMDS-204ENST00000476972 PRAMEF7Q5VXH5 474 aa16.94■□□□□ 0.3
GMDS-204ENST00000476972 ANKRD34AQ69YU3 496 aa16.94■□□□□ 0.3
GMDS-204ENST00000476972 TFAP2EQ6VUC0 442 aa16.94■□□□□ 0.3
GMDS-204ENST00000476972 STAC2Q6ZMT1 411 aa16.94■□□□□ 0.3
GMDS-204ENST00000476972 BEND4Q6ZU67 534 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms