RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 PHC1P78364 1004 aa10.45□□□□□ -0.74
HDAC6-219ENST00000476625 PCLAFQ15004 111 aa10.45□□□□□ -0.74
HDAC6-219ENST00000476625 ZNF544Q6NX49 715 aa10.45□□□□□ -0.74
HDAC6-219ENST00000476625 VHLLQ6RSH7 139 aa10.45□□□□□ -0.74
HDAC6-219ENST00000476625 MTDHQ86UE4 582 aaKnown RBP10.45□□□□□ -0.74
HDAC6-219ENST00000476625 MYPOPQ86VE0 399 aaPredicted RBP10.45□□□□□ -0.74
HDAC6-219ENST00000476625 P2RY8Q86VZ1 359 aa10.45□□□□□ -0.74
HDAC6-219ENST00000476625 CCDC63Q8NA47 563 aa10.45□□□□□ -0.74
HDAC6-219ENST00000476625 TWIST2Q8WVJ9 160 aa10.45□□□□□ -0.74
HDAC6-219ENST00000476625 ZG16BQ96DA0 208 aa10.45□□□□□ -0.74
HDAC6-219ENST00000476625 MUS81Q96NY9 551 aa10.45□□□□□ -0.74
HDAC6-219ENST00000476625 VRK1Q99986 396 aaPredicted RBP10.45□□□□□ -0.74
HDAC6-219ENST00000476625 USB1Q9BQ65 265 aaKnown RBP10.45□□□□□ -0.74
HDAC6-219ENST00000476625 PIMREGQ9BSJ6 248 aa10.45□□□□□ -0.74
HDAC6-219ENST00000476625 CCDC106Q9BWC9 280 aa10.45□□□□□ -0.74
HDAC6-219ENST00000476625 LAT2Q9GZY6 243 aa10.45□□□□□ -0.74
HDAC6-219ENST00000476625 SLC17A5Q9NRA2 495 aa10.45□□□□□ -0.74
HDAC6-219ENST00000476625 ACER3Q9NUN7 267 aa10.45□□□□□ -0.74
HDAC6-219ENST00000476625 OXSMQ9NWU1 459 aa10.45□□□□□ -0.74
HDAC6-219ENST00000476625 TAS2R16Q9NYV7 291 aa10.45□□□□□ -0.74
HDAC6-219ENST00000476625 PSMC3IPQ9P2W1 217 aaPredicted RBP10.45□□□□□ -0.74
HDAC6-219ENST00000476625 FAF1Q9UNN5 650 aaPredicted RBP10.45□□□□□ -0.74
HDAC6-219ENST00000476625 IGHV1-18A0A0C4DH31 117 aa10.44□□□□□ -0.74
HDAC6-219ENST00000476625 ZC3H12DA2A288 527 aaKnown RBP10.44□□□□□ -0.74
HDAC6-219ENST00000476625 LYNX1G3V0Z9 82 aa10.44□□□□□ -0.74
HDAC6-219ENST00000476625 EIF4E2O60573 245 aaKnown RBP10.44□□□□□ -0.74
HDAC6-219ENST00000476625 CSTAP01040 98 aa10.44□□□□□ -0.74
HDAC6-219ENST00000476625 ABHD2P08910 425 aa10.44□□□□□ -0.74
HDAC6-219ENST00000476625 LYNX1P0DP58 116 aa10.44□□□□□ -0.74
HDAC6-219ENST00000476625 IMPDH2P12268 514 aa10.44□□□□□ -0.74
HDAC6-219ENST00000476625 CPA3P15088 417 aa10.44□□□□□ -0.74
HDAC6-219ENST00000476625 APOBEC3AP31941 199 aaPredicted RBP10.44□□□□□ -0.74
HDAC6-219ENST00000476625 ARRB2P32121 409 aa10.44□□□□□ -0.74
HDAC6-219ENST00000476625 HPCAL1P37235 193 aa10.44□□□□□ -0.74
HDAC6-219ENST00000476625 ASMTP46597 345 aa10.44□□□□□ -0.74
HDAC6-219ENST00000476625 DNAJB13P59910 316 aa10.44□□□□□ -0.74
HDAC6-219ENST00000476625 HBA1P69905 142 aa10.44□□□□□ -0.74
HDAC6-219ENST00000476625 FUT5Q11128 374 aa10.44□□□□□ -0.74
HDAC6-219ENST00000476625 TRIP10Q15642 601 aa10.44□□□□□ -0.74
HDAC6-219ENST00000476625 UGT3A2Q3SY77 523 aa10.44□□□□□ -0.74
HDAC6-219ENST00000476625 IQCCQ4KMZ1 466 aa10.44□□□□□ -0.74
HDAC6-219ENST00000476625 SPATA19Q7Z5L4 167 aa10.44□□□□□ -0.74
HDAC6-219ENST00000476625 C4orf33Q8N1A6 199 aa10.44□□□□□ -0.74
HDAC6-219ENST00000476625 OR56A1Q8NGH5 318 aa10.44□□□□□ -0.74
HDAC6-219ENST00000476625 ACMSDQ8TDX5 336 aa10.44□□□□□ -0.74
HDAC6-219ENST00000476625 RAB8BQ92930 207 aa10.44□□□□□ -0.74
HDAC6-219ENST00000476625 C16orf45Q96MC5 204 aaPredicted RBP10.44□□□□□ -0.74
HDAC6-219ENST00000476625 TRMOQ9BU70 441 aa10.44□□□□□ -0.74
HDAC6-219ENST00000476625 MECRQ9BV79 373 aa10.44□□□□□ -0.74
HDAC6-219ENST00000476625 BHLHE41Q9C0J9 482 aaPredicted RBP10.44□□□□□ -0.74
HDAC6-219ENST00000476625 HOXD1Q9GZZ0 328 aa10.44□□□□□ -0.74
HDAC6-219ENST00000476625 EMC3Q9P0I2 261 aa10.44□□□□□ -0.74
HDAC6-219ENST00000476625 MALT1Q9UDY8 824 aa10.44□□□□□ -0.74
HDAC6-219ENST00000476625 DCDC2Q9UHG0 476 aa10.44□□□□□ -0.74
HDAC6-219ENST00000476625 TMEM72A0PK05 275 aa10.43□□□□□ -0.74
HDAC6-219ENST00000476625 NR5A2O00482 541 aa10.43□□□□□ -0.74
HDAC6-219ENST00000476625 CFLARO15519 480 aa10.43□□□□□ -0.74
HDAC6-219ENST00000476625 DNAJA2O60884 412 aa10.43□□□□□ -0.74
HDAC6-219ENST00000476625 MRPL33O75394 65 aaKnown RBP10.43□□□□□ -0.74
HDAC6-219ENST00000476625 VENTXO95231 258 aa10.43□□□□□ -0.74
HDAC6-219ENST00000476625 HSPA4LO95757 839 aa10.43□□□□□ -0.74
HDAC6-219ENST00000476625 CFPP27918 469 aa10.43□□□□□ -0.74
HDAC6-219ENST00000476625 CALCRP30988 508 aa10.43□□□□□ -0.74
HDAC6-219ENST00000476625 THBS2P35442 1172 aa10.43□□□□□ -0.74
HDAC6-219ENST00000476625 PGM1P36871 562 aa10.43□□□□□ -0.74
HDAC6-219ENST00000476625 CSNK2A1P68400 391 aaPredicted RBP10.43□□□□□ -0.74
HDAC6-219ENST00000476625 ZNF141Q15928 474 aa10.43□□□□□ -0.74
HDAC6-219ENST00000476625 RINLQ6ZS11 566 aa10.43□□□□□ -0.74
HDAC6-219ENST00000476625 ZCCHC23Q6ZST2 131 aa10.43□□□□□ -0.74
HDAC6-219ENST00000476625 LINGO2Q7L985 606 aa10.43□□□□□ -0.74
HDAC6-219ENST00000476625 SLC46A3Q7Z3Q1 461 aa10.43□□□□□ -0.74
HDAC6-219ENST00000476625 LCA5Q86VQ0 697 aa10.43□□□□□ -0.74
HDAC6-219ENST00000476625 ADGRG3Q86Y34 549 aa10.43□□□□□ -0.74
HDAC6-219ENST00000476625 DEPDC4Q8N2C3 294 aa10.43□□□□□ -0.74
HDAC6-219ENST00000476625 OR5P2Q8WZ92 322 aa10.43□□□□□ -0.74
HDAC6-219ENST00000476625 ANP32BQ92688 251 aaKnown RBP10.43□□□□□ -0.74
HDAC6-219ENST00000476625 ZNF385AQ96PM9 386 aaKnown RBP10.43□□□□□ -0.74
HDAC6-219ENST00000476625 OR51I1Q9H343 314 aa10.43□□□□□ -0.74
HDAC6-219ENST00000476625 HHATLQ9HCP6 504 aa10.43□□□□□ -0.74
HDAC6-219ENST00000476625 FLVCR1Q9Y5Y0 555 aa10.43□□□□□ -0.74
HDAC6-219ENST00000476625 PMF1-BGLAPU3KQ54 211 aa10.43□□□□□ -0.74
HDAC6-219ENST00000476625 PRAMEF27A3QJZ7 478 aa10.42□□□□□ -0.74
HDAC6-219ENST00000476625 PMS2P2O95744 297 aa10.42□□□□□ -0.74
HDAC6-219ENST00000476625 PGRP06401 933 aa10.42□□□□□ -0.74
HDAC6-219ENST00000476625 IGFBP1P08833 259 aaPredicted RBP10.42□□□□□ -0.74
HDAC6-219ENST00000476625 CELA3BP08861 270 aa10.42□□□□□ -0.74
HDAC6-219ENST00000476625 CSF3P09919 207 aa10.42□□□□□ -0.74
HDAC6-219ENST00000476625 ZNF23P17027 643 aa10.42□□□□□ -0.74
HDAC6-219ENST00000476625 MATN1P21941 496 aa10.42□□□□□ -0.74
HDAC6-219ENST00000476625 CHRNB3Q05901 458 aa10.42□□□□□ -0.74
HDAC6-219ENST00000476625 CCNIQ14094 377 aa10.42□□□□□ -0.74
HDAC6-219ENST00000476625 PDK3Q15120 406 aa10.42□□□□□ -0.74
HDAC6-219ENST00000476625 ADIPOQQ15848 244 aa10.42□□□□□ -0.74
HDAC6-219ENST00000476625 IL23RQ5VWK5 629 aa10.42□□□□□ -0.74
HDAC6-219ENST00000476625 OR4F3Q6IEY1 312 aa10.42□□□□□ -0.74
HDAC6-219ENST00000476625 TYW3Q6IPR3 259 aaKnown RBP10.42□□□□□ -0.74
HDAC6-219ENST00000476625 TNFAIP8L2Q6P589 184 aaPredicted RBP10.42□□□□□ -0.74
HDAC6-219ENST00000476625 EMBQ6PCB8 327 aa10.42□□□□□ -0.74
HDAC6-219ENST00000476625 C6orf120Q7Z4R8 191 aa10.42□□□□□ -0.74
HDAC6-219ENST00000476625 R3HCC1LQ7Z5L2 792 aaKnown RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms