RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 SAMD8Q96LT4 415 aa12.5□□□□□ -0.41
TRAF4-210ENST00000475329 POLDIP3Q9BY77 421 aaKnown RBP12.5□□□□□ -0.41
TRAF4-210ENST00000475329 OR52D1Q9H346 318 aa12.5□□□□□ -0.41
TRAF4-210ENST00000475329 CPNE5Q9HCH3 593 aa12.5□□□□□ -0.41
TRAF4-210ENST00000475329 CLN6Q9NWW5 311 aa12.5□□□□□ -0.41
TRAF4-210ENST00000475329 FAM186AA6NE01 2351 aa12.5□□□□□ -0.41
TRAF4-210ENST00000475329 AHCTF1Q8WYP5 2266 aa12.49□□□□□ -0.41
TRAF4-210ENST00000475329 TMED7-TICAM2A0A0A6YYA0 188 aa12.49□□□□□ -0.41
TRAF4-210ENST00000475329 C2orf72A6NCS6 295 aa12.49□□□□□ -0.41
TRAF4-210ENST00000475329 FAM47E-STBD1D6RA91 191 aa12.49□□□□□ -0.41
TRAF4-210ENST00000475329 XPNPEP2O43895 674 aa12.49□□□□□ -0.41
TRAF4-210ENST00000475329 OR7A10O76100 309 aa12.49□□□□□ -0.41
TRAF4-210ENST00000475329 LIFP15018 202 aa12.49□□□□□ -0.41
TRAF4-210ENST00000475329 BMP7P18075 431 aa12.49□□□□□ -0.41
TRAF4-210ENST00000475329 FUT1P19526 365 aa12.49□□□□□ -0.41
TRAF4-210ENST00000475329 RPL5P46777 297 aaKnown RBP12.49□□□□□ -0.41
TRAF4-210ENST00000475329 PCYT1AP49585 367 aa12.49□□□□□ -0.41
TRAF4-210ENST00000475329 ZNF41P51814 821 aaPredicted RBP12.49□□□□□ -0.41
TRAF4-210ENST00000475329 NR1H2P55055 460 aa12.49□□□□□ -0.41
TRAF4-210ENST00000475329 AIMP2Q13155 320 aaKnown RBP12.49□□□□□ -0.41
TRAF4-210ENST00000475329 CLEC12AQ5QGZ9 265 aa12.49□□□□□ -0.41
TRAF4-210ENST00000475329 TMEM201Q5SNT2 666 aa12.49□□□□□ -0.41
TRAF4-210ENST00000475329 OR5M10Q6IEU7 315 aa12.49□□□□□ -0.41
TRAF4-210ENST00000475329 ACSM5Q6NUN0 579 aa12.49□□□□□ -0.41
TRAF4-210ENST00000475329 SMARCD3Q6STE5 483 aa12.49□□□□□ -0.41
TRAF4-210ENST00000475329 RTL4Q6ZR62 310 aa12.49□□□□□ -0.41
TRAF4-210ENST00000475329 OAFQ86UD1 273 aa12.49□□□□□ -0.41
TRAF4-210ENST00000475329 GPALPP1Q8IXQ4 340 aa12.49□□□□□ -0.41
TRAF4-210ENST00000475329 SIRT6Q8N6T7 355 aa12.49□□□□□ -0.41
TRAF4-210ENST00000475329 OR2T33Q8NG76 320 aa12.49□□□□□ -0.41
TRAF4-210ENST00000475329 OR8J1Q8NGP2 316 aa12.49□□□□□ -0.41
TRAF4-210ENST00000475329 IPCEF1Q8WWN9 437 aaPredicted RBP12.49□□□□□ -0.41
TRAF4-210ENST00000475329 ZNF524Q96C55 264 aa12.49□□□□□ -0.41
TRAF4-210ENST00000475329 THOC3Q96J01 351 aaKnown RBP12.49□□□□□ -0.41
TRAF4-210ENST00000475329 FER1L6-AS2Q96M78 137 aa12.49□□□□□ -0.41
TRAF4-210ENST00000475329 Q96MT0 163 aa12.49□□□□□ -0.41
TRAF4-210ENST00000475329 CCNB1IP1Q9NPC3 277 aa12.49□□□□□ -0.41
TRAF4-210ENST00000475329 PLCXD1Q9NUJ7 323 aa12.49□□□□□ -0.41
TRAF4-210ENST00000475329 TVP23BQ9NYZ1 205 aa12.49□□□□□ -0.41
TRAF4-210ENST00000475329 MED11Q9P086 117 aa12.49□□□□□ -0.41
TRAF4-210ENST00000475329 OSGIN1Q9UJX0 560 aa12.49□□□□□ -0.41
TRAF4-210ENST00000475329 SIGLEC7Q9Y286 467 aa12.49□□□□□ -0.41
TRAF4-210ENST00000475329 TMED7Q9Y3B3 224 aa12.49□□□□□ -0.41
TRAF4-210ENST00000475329 RIF1Q5UIP0 2472 aaKnown RBP12.49□□□□□ -0.41
TRAF4-210ENST00000475329 TRAV27A0A087WT01 109 aa12.48□□□□□ -0.41
TRAF4-210ENST00000475329 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.48□□□□□ -0.41
TRAF4-210ENST00000475329 SH3D21A4FU49 640 aa12.48□□□□□ -0.41
TRAF4-210ENST00000475329 DPPA5A6NC42 116 aa12.48□□□□□ -0.41
TRAF4-210ENST00000475329 SUSD5O60279 629 aa12.48□□□□□ -0.41
TRAF4-210ENST00000475329 SLC25A12O75746 678 aa12.48□□□□□ -0.41
TRAF4-210ENST00000475329 CH25HO95992 272 aa12.48□□□□□ -0.41
TRAF4-210ENST00000475329 HMGN1P05114 100 aa12.48□□□□□ -0.41
TRAF4-210ENST00000475329 CCL3P10147 92 aa12.48□□□□□ -0.41
TRAF4-210ENST00000475329 PRKCAP17252 672 aa12.48□□□□□ -0.41
TRAF4-210ENST00000475329 SLC6A6P31641 620 aa12.48□□□□□ -0.41
TRAF4-210ENST00000475329 GRK5P34947 590 aa12.48□□□□□ -0.41
TRAF4-210ENST00000475329 ST13P50502 369 aaKnown RBP12.48□□□□□ -0.41
TRAF4-210ENST00000475329 DLX5P56178 289 aa12.48□□□□□ -0.41
TRAF4-210ENST00000475329 RTP5Q14D33 572 aa12.48□□□□□ -0.41
TRAF4-210ENST00000475329 SNAPC1Q16533 368 aa12.48□□□□□ -0.41
TRAF4-210ENST00000475329 SMN1Q16637 294 aaKnown RBP12.48□□□□□ -0.41
TRAF4-210ENST00000475329 ZBED5Q49AG3 693 aa12.48□□□□□ -0.41
TRAF4-210ENST00000475329 ACER2Q5QJU3 275 aa12.48□□□□□ -0.41
TRAF4-210ENST00000475329 DCAF10Q5QP82 559 aa12.48□□□□□ -0.41
TRAF4-210ENST00000475329 PRAMEF20Q5VT98 475 aa12.48□□□□□ -0.41
TRAF4-210ENST00000475329 SLC22A10Q63ZE4 541 aa12.48□□□□□ -0.41
TRAF4-210ENST00000475329 B3GNTL1Q67FW5 361 aaPredicted RBP12.48□□□□□ -0.41
TRAF4-210ENST00000475329 SLC46A3Q7Z3Q1 461 aa12.48□□□□□ -0.41
TRAF4-210ENST00000475329 LSRQ86X29 649 aaPredicted RBP12.48□□□□□ -0.41
TRAF4-210ENST00000475329 CYP4Z2PQ8N1L4 340 aa12.48□□□□□ -0.41
TRAF4-210ENST00000475329 TCEANCQ8N8B7 351 aa12.48□□□□□ -0.41
TRAF4-210ENST00000475329 OR2M3Q8NG83 312 aa12.48□□□□□ -0.41
TRAF4-210ENST00000475329 OR4K17Q8NGC6 315 aa12.48□□□□□ -0.41
TRAF4-210ENST00000475329 OR4Q3Q8NH05 313 aa12.48□□□□□ -0.41
TRAF4-210ENST00000475329 PAQR8Q8TEZ7 354 aa12.48□□□□□ -0.41
TRAF4-210ENST00000475329 PLEKHA8Q96JA3 519 aa12.48□□□□□ -0.41
TRAF4-210ENST00000475329 SGCZQ96LD1 299 aa12.48□□□□□ -0.41
TRAF4-210ENST00000475329 FRMD6Q96NE9 622 aa12.48□□□□□ -0.41
TRAF4-210ENST00000475329 IL4I1Q96RQ9 567 aa12.48□□□□□ -0.41
TRAF4-210ENST00000475329 ANGPTL4Q9BY76 406 aa12.48□□□□□ -0.41
TRAF4-210ENST00000475329 VCX3AQ9NNX9 186 aa12.48□□□□□ -0.41
TRAF4-210ENST00000475329 SH2D2AQ9NP31 389 aa12.48□□□□□ -0.41
TRAF4-210ENST00000475329 TEKT2Q9UIF3 430 aa12.48□□□□□ -0.41
TRAF4-210ENST00000475329 BAIAP2Q9UQB8 552 aa12.48□□□□□ -0.41
TRAF4-210ENST00000475329 ZNF337Q9Y3M9 751 aa12.48□□□□□ -0.41
TRAF4-210ENST00000475329 SNX5Q9Y5X3 404 aa12.48□□□□□ -0.41
TRAF4-210ENST00000475329 A6NHS1 94 aa12.47□□□□□ -0.41
TRAF4-210ENST00000475329 PRKYO43930 277 aa12.47□□□□□ -0.41
TRAF4-210ENST00000475329 MRPS14O60783 128 aaKnown RBP12.47□□□□□ -0.41
TRAF4-210ENST00000475329 PTP4A3O75365 173 aa12.47□□□□□ -0.41
TRAF4-210ENST00000475329 TFAP2AP05549 437 aa12.47□□□□□ -0.41
TRAF4-210ENST00000475329 CCNA2P20248 432 aa12.47□□□□□ -0.41
TRAF4-210ENST00000475329 FXYD6P3P58550 94 aa12.47□□□□□ -0.41
TRAF4-210ENST00000475329 SLC35A2P78381 396 aa12.47□□□□□ -0.41
TRAF4-210ENST00000475329 TGIF1Q15583 401 aa12.47□□□□□ -0.41
TRAF4-210ENST00000475329 ZNF74Q16587 644 aa12.47□□□□□ -0.41
TRAF4-210ENST00000475329 OCLNQ16625 522 aa12.47□□□□□ -0.41
TRAF4-210ENST00000475329 MEDAGQ5VYS4 303 aa12.47□□□□□ -0.41
TRAF4-210ENST00000475329 POMZP3Q6PJE2 187 aa12.47□□□□□ -0.41
TRAF4-210ENST00000475329 C5orf46Q6UWT4 87 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms