RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 ITGA1P56199 1179 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 VSX2P58304 361 aaPredicted RBP5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 SLC35A2P78381 396 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 FKBP3Q00688 224 aaKnown RBP5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 FPGSQ05932 587 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 GTF2H2Q13888 395 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 IL18Q14116 193 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 GAMTQ14353 236 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 IMPG1Q17R60 797 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 DUOXA1Q1HG43 343 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 C5orf64Q2M2E5 130 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 EXOC3L2Q2M3D2 409 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 SIRPB2Q5JXA9 342 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 SPATA46Q5T0L3 261 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 PRAMEF8Q5VWM4 474 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 PRAMEF7Q5VXH5 474 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 RNLSQ5VYX0 342 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 GTF2H2CQ6P1K8 395 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 LCLAT1Q6UWP7 414 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 DPY19L2P2Q6ZN68 376 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 LANCL3Q6ZV70 420 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 TECPR1Q7Z6L1 1165 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 TSPAN33Q86UF1 283 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 SLC26A11Q86WA9 606 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 IFNEQ86WN2 208 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 PLXDC1Q8IUK5 500 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 WDFY1Q8IWB7 410 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 FTMTQ8N4E7 242 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 OR11H4Q8NGC9 324 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 OR5M8Q8NGP6 311 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 OR6K3Q8NGY3 331 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 OR8U1Q8NH10 309 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 OR10A6Q8NH74 314 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 COQ8AQ8NI60 647 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 HASPINQ8TF76 798 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 PSMG2Q969U7 264 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 MRGPRFQ96AM1 343 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 ZNF707Q96C28 371 aaPredicted RBP5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 STACQ99469 402 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 PKMYT1Q99640 499 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 NIPSNAP1Q9BPW8 284 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 URM1Q9BTM9 101 aaKnown RBP5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 SNHG12Q9BXW3 62 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 TEX101Q9BY14 249 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 SEC11CQ9BY50 192 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 GLIS2Q9BZE0 524 aaPredicted RBP5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 WWTR1Q9GZV5 400 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 NSUN3Q9H649 340 aaKnown RBP5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 TPT1P8Q9HAU6 139 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 ZBTB26Q9HCK0 441 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 SPHK2Q9NRA0 654 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 ABCB8Q9NUT2 735 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 ZNF701Q9NV72 531 aaPredicted RBP5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 DDIT4Q9NX09 232 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 SMPD4Q9NXE4 827 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 RASL12Q9NYN1 266 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 KCNG2Q9UJ96 466 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 MRTO4Q9UKD2 239 aaKnown RBP5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 IKZF3Q9UKT9 509 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 PSG11Q9UQ72 335 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 CAMK2AQ9UQM7 478 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 ZFP30Q9Y2G7 519 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 YBX2Q9Y2T7 364 aaKnown RBP5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 CMAHPQ9Y471 501 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 DICER1Q9UPY3 1922 aaKnown RBP5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 DDX60Q8IY21 1712 aaKnown RBP5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 WDR90Q96KV7 1748 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 LRIT2A6NDA9 550 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 TCAF2A6NFQ2 919 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 MAGEB17A8MXT2 336 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 SGK494L7N484 410 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 GPR31O00270 319 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 MDM4O15151 490 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 PLA2G10O15496 165 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 RGS14O43566 566 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 KDELR3O43731 214 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 OR2T1O43869 369 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 ATP6AP2O75787 350 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 AKR7A3O95154 331 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 STBD1O95210 358 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 GASTP01350 101 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 RHOP08100 348 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 SLC35G4P0C7Q5 338 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 SLC35E2BP0CK96 405 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 SLC35E2P0CK97 266 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 HLA-GP17693 338 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 GLRA1P23415 457 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 MGAT1P26572 445 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 CST5P28325 142 aaPredicted RBP5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 CORO1AP31146 461 aaKnown RBP5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 HOXA13P31271 388 aaPredicted RBP5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 SDC4P31431 198 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 MAS1LP35410 378 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 OR3A1P47881 315 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 KHKP50053 298 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 PNLIPRP1P54315 467 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 WNT3AP56704 352 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 PMP22Q01453 160 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 TLE2Q04725 743 aa5.53□□□□□ -1.52
ECHDC1-215ENST00000475319 CD47Q08722 323 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms