RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 OR5P2Q8WZ92 322 aa11.03□□□□□ -0.64
SKA3-206ENST00000475251 ZMYND19Q96E35 227 aaPredicted RBP11.03□□□□□ -0.64
SKA3-206ENST00000475251 SORCS2Q96PQ0 1159 aa11.03□□□□□ -0.64
SKA3-206ENST00000475251 QRSL1Q9H0R6 528 aaKnown RBP11.03□□□□□ -0.64
SKA3-206ENST00000475251 BAIAP2L1Q9UHR4 511 aa11.03□□□□□ -0.64
SKA3-206ENST00000475251 SLC9A8Q9Y2E8 581 aa11.03□□□□□ -0.64
SKA3-206ENST00000475251 HDGFL3Q9Y3E1 203 aa11.03□□□□□ -0.64
SKA3-206ENST00000475251 IGHV4-61A0A0C4DH41 118 aa11.02□□□□□ -0.65
SKA3-206ENST00000475251 DUXAA6NLW8 204 aa11.02□□□□□ -0.65
SKA3-206ENST00000475251 ESPNB1AK53 854 aa11.02□□□□□ -0.65
SKA3-206ENST00000475251 ATP6V1G2-DDX39BF2Z307 99 aa11.02□□□□□ -0.65
SKA3-206ENST00000475251 G3V2L1 256 aa11.02□□□□□ -0.65
SKA3-206ENST00000475251 AZIN1O14977 448 aa11.02□□□□□ -0.65
SKA3-206ENST00000475251 SCAMP2O15127 329 aaKnown RBP11.02□□□□□ -0.65
SKA3-206ENST00000475251 WIPF1O43516 503 aa11.02□□□□□ -0.65
SKA3-206ENST00000475251 SNUPNO95149 360 aaKnown RBP11.02□□□□□ -0.65
SKA3-206ENST00000475251 CSTAP01040 98 aa11.02□□□□□ -0.65
SKA3-206ENST00000475251 ERCC1P07992 297 aaPredicted RBP11.02□□□□□ -0.65
SKA3-206ENST00000475251 ITGA5P08648 1049 aa11.02□□□□□ -0.65
SKA3-206ENST00000475251 RFTN2Q52LD8 501 aaPredicted RBP11.02□□□□□ -0.65
SKA3-206ENST00000475251 PDZK1Q5T2W1 519 aa11.02□□□□□ -0.65
SKA3-206ENST00000475251 CLEC6AQ6EIG7 209 aa11.02□□□□□ -0.65
SKA3-206ENST00000475251 EIF3MQ7L2H7 374 aaKnown RBP11.02□□□□□ -0.65
SKA3-206ENST00000475251 WDR31Q8NA23 367 aa11.02□□□□□ -0.65
SKA3-206ENST00000475251 ZFAND2BQ8WV99 257 aa11.02□□□□□ -0.65
SKA3-206ENST00000475251 OIT3Q8WWZ8 545 aa11.02□□□□□ -0.65
SKA3-206ENST00000475251 ANP32BQ92688 251 aaKnown RBP11.02□□□□□ -0.65
SKA3-206ENST00000475251 HPS1Q92902 700 aa11.02□□□□□ -0.65
SKA3-206ENST00000475251 FOXN4Q96NZ1 517 aa11.02□□□□□ -0.65
SKA3-206ENST00000475251 PRPF18Q99633 342 aaKnown RBP11.02□□□□□ -0.65
SKA3-206ENST00000475251 VRK1Q99986 396 aaPredicted RBP11.02□□□□□ -0.65
SKA3-206ENST00000475251 PLA2G12AQ9BZM1 189 aa11.02□□□□□ -0.65
SKA3-206ENST00000475251 BPESC1Q9GZL8 116 aa11.02□□□□□ -0.65
SKA3-206ENST00000475251 GRPEL1Q9HAV7 217 aa11.02□□□□□ -0.65
SKA3-206ENST00000475251 OBP2BQ9NPH6 170 aa11.02□□□□□ -0.65
SKA3-206ENST00000475251 SLC17A5Q9NRA2 495 aa11.02□□□□□ -0.65
SKA3-206ENST00000475251 ACER3Q9NUN7 267 aa11.02□□□□□ -0.65
SKA3-206ENST00000475251 GPATCH2Q9NW75 528 aa11.02□□□□□ -0.65
SKA3-206ENST00000475251 PSMC3IPQ9P2W1 217 aaPredicted RBP11.02□□□□□ -0.65
SKA3-206ENST00000475251 CHRNA9Q9UGM1 479 aa11.02□□□□□ -0.65
SKA3-206ENST00000475251 ATP6V1HQ9UI12 483 aa11.02□□□□□ -0.65
SKA3-206ENST00000475251 PYCARDQ9ULZ3 195 aa11.02□□□□□ -0.65
SKA3-206ENST00000475251 A0A0A6YYJ9 748 aa11.01□□□□□ -0.65
SKA3-206ENST00000475251 B9A039 149 aa11.01□□□□□ -0.65
SKA3-206ENST00000475251 SLCO1B7G3V0H7 640 aa11.01□□□□□ -0.65
SKA3-206ENST00000475251 PDLIM1O00151 329 aa11.01□□□□□ -0.65
SKA3-206ENST00000475251 LSM1O15116 133 aaKnown RBP11.01□□□□□ -0.65
SKA3-206ENST00000475251 EIF1BO60739 113 aaKnown RBP11.01□□□□□ -0.65
SKA3-206ENST00000475251 STX11O75558 287 aa11.01□□□□□ -0.65
SKA3-206ENST00000475251 PDE5AO76074 875 aa11.01□□□□□ -0.65
SKA3-206ENST00000475251 URI1O94763 535 aaPredicted RBP11.01□□□□□ -0.65
SKA3-206ENST00000475251 UBTFL6P0CB48 400 aaPredicted RBP11.01□□□□□ -0.65
SKA3-206ENST00000475251 ITGA2P17301 1181 aa11.01□□□□□ -0.65
SKA3-206ENST00000475251 EFNA1P20827 205 aaPredicted RBP11.01□□□□□ -0.65
SKA3-206ENST00000475251 CFPP27918 469 aa11.01□□□□□ -0.65
SKA3-206ENST00000475251 GCAP28676 217 aa11.01□□□□□ -0.65
SKA3-206ENST00000475251 MPGP29372 298 aa11.01□□□□□ -0.65
SKA3-206ENST00000475251 SERPINF1P36955 418 aa11.01□□□□□ -0.65
SKA3-206ENST00000475251 CHN2P52757 468 aa11.01□□□□□ -0.65
SKA3-206ENST00000475251 SCGB2A2Q13296 93 aa11.01□□□□□ -0.65
SKA3-206ENST00000475251 GPR68Q15743 365 aa11.01□□□□□ -0.65
SKA3-206ENST00000475251 ZNF141Q15928 474 aa11.01□□□□□ -0.65
SKA3-206ENST00000475251 GALNTL6Q49A17 601 aa11.01□□□□□ -0.65
SKA3-206ENST00000475251 SYT10Q6XYQ8 523 aa11.01□□□□□ -0.65
SKA3-206ENST00000475251 ABHD12BQ7Z5M8 362 aaPredicted RBP11.01□□□□□ -0.65
SKA3-206ENST00000475251 OR52E4Q8NGH9 312 aa11.01□□□□□ -0.65
SKA3-206ENST00000475251 ZNF563Q8TA94 476 aa11.01□□□□□ -0.65
SKA3-206ENST00000475251 ZNF524Q96C55 264 aa11.01□□□□□ -0.65
SKA3-206ENST00000475251 OR7D2Q96RA2 312 aa11.01□□□□□ -0.65
SKA3-206ENST00000475251 SDF2Q99470 211 aa11.01□□□□□ -0.65
SKA3-206ENST00000475251 BHLHE41Q9C0J9 482 aaPredicted RBP11.01□□□□□ -0.65
SKA3-206ENST00000475251 ADAM19Q9H013 955 aa11.01□□□□□ -0.65
SKA3-206ENST00000475251 RAB1BQ9H0U4 201 aa11.01□□□□□ -0.65
SKA3-206ENST00000475251 MOV10Q9HCE1 1003 aaKnown RBP11.01□□□□□ -0.65
SKA3-206ENST00000475251 TMEFF2Q9UIK5 374 aaPredicted RBP11.01□□□□□ -0.65
SKA3-206ENST00000475251 MOKQ9UQ07 419 aa11.01□□□□□ -0.65
SKA3-206ENST00000475251 SLC35A3Q9Y2D2 325 aa11.01□□□□□ -0.65
SKA3-206ENST00000475251 PCDHB14Q9Y5E9 798 aa11.01□□□□□ -0.65
SKA3-206ENST00000475251 PTGDR2Q9Y5Y4 395 aa11.01□□□□□ -0.65
SKA3-206ENST00000475251 HEATR1Q9H583 2144 aaKnown RBP11□□□□□ -0.65
SKA3-206ENST00000475251 VSTM5A8MXK1 200 aa11□□□□□ -0.65
SKA3-206ENST00000475251 CFLARO15519 480 aa11□□□□□ -0.65
SKA3-206ENST00000475251 LYPLA1O75608 230 aaPredicted RBP11□□□□□ -0.65
SKA3-206ENST00000475251 CRYAAP02489 173 aa11□□□□□ -0.65
SKA3-206ENST00000475251 BCKDHAP12694 445 aa11□□□□□ -0.65
SKA3-206ENST00000475251 CCT5P48643 541 aa11□□□□□ -0.65
SKA3-206ENST00000475251 PPOXP50336 477 aa11□□□□□ -0.65
SKA3-206ENST00000475251 MST1LQ2TV78 715 aa11□□□□□ -0.65
SKA3-206ENST00000475251 LIPMQ5VYY2 423 aa11□□□□□ -0.65
SKA3-206ENST00000475251 TRMT10CQ7L0Y3 403 aaKnown RBP11□□□□□ -0.65
SKA3-206ENST00000475251 GRINAQ7Z429 371 aa11□□□□□ -0.65
SKA3-206ENST00000475251 LINC01356Q8N9X3 169 aa11□□□□□ -0.65
SKA3-206ENST00000475251 CCDC63Q8NA47 563 aa11□□□□□ -0.65
SKA3-206ENST00000475251 OR7A2PQ8NGA2 310 aa11□□□□□ -0.65
SKA3-206ENST00000475251 OR2T11Q8NH01 316 aa11□□□□□ -0.65
SKA3-206ENST00000475251 NAA11Q9BSU3 229 aaPredicted RBP11□□□□□ -0.65
SKA3-206ENST00000475251 KATNB1Q9BVA0 655 aa11□□□□□ -0.65
SKA3-206ENST00000475251 CCDC106Q9BWC9 280 aa11□□□□□ -0.65
SKA3-206ENST00000475251 TNFRSF12AQ9NP84 129 aa11□□□□□ -0.65
SKA3-206ENST00000475251 CA10Q9NS85 328 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms