RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 TFP02787 698 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 LGALS2P05162 132 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 CHRM5P08912 532 aaPredicted RBP3.76□□□□□ -1.81
USP16-205ENST00000474835 TBC1D3HP0C7X1 549 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 TNFRSF1BP20333 461 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 IFNGR2P38484 337 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 DGKGP49619 791 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 RAB4BP61018 213 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 NUTF2P61970 127 aaKnown RBP3.76□□□□□ -1.81
USP16-205ENST00000474835 RPS4XP62701 263 aaKnown RBP3.76□□□□□ -1.81
USP16-205ENST00000474835 SIGLEC14Q08ET2 396 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 GPR68Q15743 365 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 TMEM31Q5JXX7 168 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 NKAIN2Q5VXU1 208 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 GDPD4Q6W3E5 623 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 Q6ZNB5 142 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 CMTM4Q8IZR5 234 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 SPAG16Q8N0X2 631 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 ARL14EPQ8N8R7 260 aaPredicted RBP3.76□□□□□ -1.81
USP16-205ENST00000474835 OR4K14Q8NGD5 310 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 TRAPPC12Q8WVT3 735 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 ZFPM2Q8WW38 1151 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 RSPRY1Q96DX4 576 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 RNFT2Q96EX2 444 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 MRI1Q9BV20 369 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 ACTR3CQ9C0K3 210 aaPredicted RBP3.76□□□□□ -1.81
USP16-205ENST00000474835 SPATC1LQ9H0A9 340 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 CXorf36Q9H7Y0 433 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 AMBNQ9NP70 447 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 PPIEQ9UNP9 301 aaKnown RBP3.76□□□□□ -1.81
USP16-205ENST00000474835 FLVCR2Q9UPI3 526 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 TRAV20A0A0B4J274 112 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 A0A0B4J2A0 478 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 LIPT2A6NK58 231 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 SUPT3HB4E1H0 165 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 TSPAN4O14817 238 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 LRP3O75074 770 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 GATBO75879 557 aaKnown RBP3.76□□□□□ -1.81
USP16-205ENST00000474835 APOL3O95236 402 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 LRATO95237 230 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 PAICSP22234 425 aaKnown RBP3.76□□□□□ -1.81
USP16-205ENST00000474835 ABCD3P28288 659 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 BDKRB2P30411 391 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 S100A3P33764 101 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 MTNR1AP48039 350 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 SLC11A2P49281 568 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 RND2P52198 227 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 EEF1A1P68104 462 aaKnown RBP3.76□□□□□ -1.81
USP16-205ENST00000474835 STX4Q12846 297 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 RBMS2Q15434 407 aaKnown RBP3.76□□□□□ -1.81
USP16-205ENST00000474835 FHL5Q5TD97 284 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 EEF1A1P5Q5VTE0 462 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 MRM1Q6IN84 353 aaKnown RBP3.76□□□□□ -1.81
USP16-205ENST00000474835 MZT2AQ6P582 158 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 PTCHD4Q6ZW05 846 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 SSX6Q7RTT6 188 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 UBE3DQ7Z6J8 389 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 PDZD9Q8IXQ8 264 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 MAML2Q8IZL2 1156 aaPredicted RBP3.76□□□□□ -1.81
USP16-205ENST00000474835 MUC20Q8N307 709 aaPredicted RBP3.76□□□□□ -1.81
USP16-205ENST00000474835 LRRC75AQ8NAA5 344 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 OR5M1Q8NGP8 315 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 OR13C8Q8NGS7 320 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 OR2T35Q8NGX2 323 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 SUN3Q8TAQ9 357 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 FAM174AQ8TBP5 190 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 SORCS1Q8WY21 1168 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 ROBO4Q8WZ75 1007 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 PTX4Q96A99 478 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 SMIM19Q96E16 107 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 KLRG1Q96E93 195 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 TCEAL7Q9BRU2 100 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 NLNQ9BYT8 704 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 ELP3Q9H9T3 547 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 UQCC1Q9NVA1 299 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 DNAJC27Q9NZQ0 273 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 LRFN1Q9P244 771 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 GHRLQ9UBU3 117 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 SHPKQ9UHJ6 478 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 METRNQ9UJH8 293 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 MRTO4Q9UKD2 239 aaKnown RBP3.76□□□□□ -1.81
USP16-205ENST00000474835 REV3LO60673 3130 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 A0A087WUU8 490 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP3.76□□□□□ -1.81
USP16-205ENST00000474835 SLC5A10A0PJK1 596 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 MEIS3P2A8K0S8 358 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 ANKRD66B4E2M5 251 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 RFXAPO00287 272 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 TERTO14746 1132 aaKnown RBP3.76□□□□□ -1.81
USP16-205ENST00000474835 CBR3O75828 277 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 GUCA1CO95843 209 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 TIA1P31483 386 aaKnown RBP eCLIP3.76□□□□□ -1.814e-9■■■■■ 31.7
USP16-205ENST00000474835 HNF1BP35680 557 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 BCL6P41182 706 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 CDX1P47902 265 aaPredicted RBP3.76□□□□□ -1.81
USP16-205ENST00000474835 SEC13P55735 322 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 ILF3Q12906 894 aaKnown RBP eCLIP3.76□□□□□ -1.81
USP16-205ENST00000474835 SCARB2Q14108 478 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 AVPI1Q5T686 147 aa3.76□□□□□ -1.81
USP16-205ENST00000474835 ANXA8L1Q5VT79 327 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms