RNA–Protein interactions for RNA: ENST00000474691.1

EPCAM-205, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5

Gene EPCAM, Length 714 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-205ENST00000474691 C10orf105Q8TEF2 133 aa12.15□□□□□ -0.46
EPCAM-205ENST00000474691 FBXO17Q96EF6 278 aa12.15□□□□□ -0.46
EPCAM-205ENST00000474691 DNAJA3Q96EY1 480 aa12.15□□□□□ -0.46
EPCAM-205ENST00000474691 SLC35G5Q96KT7 338 aa12.15□□□□□ -0.46
EPCAM-205ENST00000474691 NAA11Q9BSU3 229 aaPredicted RBP12.15□□□□□ -0.46
EPCAM-205ENST00000474691 C1orf50Q9BV19 199 aa12.15□□□□□ -0.46
EPCAM-205ENST00000474691 DUSP26Q9BV47 211 aa12.15□□□□□ -0.46
EPCAM-205ENST00000474691 C19orf24Q9BVV8 132 aa12.15□□□□□ -0.46
EPCAM-205ENST00000474691 GATA5Q9BWX5 397 aaPredicted RBP12.15□□□□□ -0.46
EPCAM-205ENST00000474691 BHLHE41Q9C0J9 482 aaPredicted RBP12.15□□□□□ -0.46
EPCAM-205ENST00000474691 PPCSQ9HAB8 311 aa12.15□□□□□ -0.46
EPCAM-205ENST00000474691 GPATCH2Q9NW75 528 aa12.15□□□□□ -0.46
EPCAM-205ENST00000474691 CHRNA9Q9UGM1 479 aa12.15□□□□□ -0.46
EPCAM-205ENST00000474691 ING1Q9UK53 422 aaPredicted RBP12.15□□□□□ -0.46
EPCAM-205ENST00000474691 MKLN1Q9UL63 735 aa12.15□□□□□ -0.46
EPCAM-205ENST00000474691 SLC35A3Q9Y2D2 325 aa12.15□□□□□ -0.46
EPCAM-205ENST00000474691 HDGFL3Q9Y3E1 203 aa12.15□□□□□ -0.46
EPCAM-205ENST00000474691 GOLGA8QA0A0J9YX86 632 aa12.14□□□□□ -0.47
EPCAM-205ENST00000474691 GOLGA8OA6NCC3 632 aa12.14□□□□□ -0.47
EPCAM-205ENST00000474691 GOLGA8NF8WBI6 632 aa12.14□□□□□ -0.47
EPCAM-205ENST00000474691 PMS2P2O95744 297 aa12.14□□□□□ -0.47
EPCAM-205ENST00000474691 IGHV4-31P0DP07 118 aa12.14□□□□□ -0.47
EPCAM-205ENST00000474691 CCNA2P20248 432 aa12.14□□□□□ -0.47
EPCAM-205ENST00000474691 EDNRAP25101 427 aa12.14□□□□□ -0.47
EPCAM-205ENST00000474691 PRPS1P60891 318 aa12.14□□□□□ -0.47
EPCAM-205ENST00000474691 SNRPD2P62316 118 aaKnown RBP12.14□□□□□ -0.47
EPCAM-205ENST00000474691 PHC1P78364 1004 aa12.14□□□□□ -0.47
EPCAM-205ENST00000474691 SKP2Q13309 424 aa12.14□□□□□ -0.47
EPCAM-205ENST00000474691 KRTAP24-1Q3LI83 254 aa12.14□□□□□ -0.47
EPCAM-205ENST00000474691 IL23RQ5VWK5 629 aa12.14□□□□□ -0.47
EPCAM-205ENST00000474691 ABLIM2Q6H8Q1 611 aa12.14□□□□□ -0.47
EPCAM-205ENST00000474691 C11orf71Q6IPW1 123 aa12.14□□□□□ -0.47
EPCAM-205ENST00000474691 C6orf120Q7Z4R8 191 aa12.14□□□□□ -0.47
EPCAM-205ENST00000474691 ABHD12BQ7Z5M8 362 aaPredicted RBP12.14□□□□□ -0.47
EPCAM-205ENST00000474691 C4orf33Q8N1A6 199 aa12.14□□□□□ -0.47
EPCAM-205ENST00000474691 C17orf78Q8N4C9 275 aa12.14□□□□□ -0.47
EPCAM-205ENST00000474691 MZB1Q8WU39 189 aa12.14□□□□□ -0.47
EPCAM-205ENST00000474691 ZNF75CPQ92670 426 aaPredicted RBP12.14□□□□□ -0.47
EPCAM-205ENST00000474691 DDIT4LQ96D03 193 aa12.14□□□□□ -0.47
EPCAM-205ENST00000474691 VRK1Q99986 396 aaPredicted RBP12.14□□□□□ -0.47
EPCAM-205ENST00000474691 C12orf65Q9H3J6 166 aaKnown RBP12.14□□□□□ -0.47
EPCAM-205ENST00000474691 TUBB1Q9H4B7 451 aa12.14□□□□□ -0.47
EPCAM-205ENST00000474691 CTPS2Q9NRF8 586 aa12.14□□□□□ -0.47
EPCAM-205ENST00000474691 ACER3Q9NUN7 267 aa12.14□□□□□ -0.47
EPCAM-205ENST00000474691 SLC9A8Q9Y2E8 581 aa12.14□□□□□ -0.47
EPCAM-205ENST00000474691 FBN1P35555 2871 aaKnown RBP12.14□□□□□ -0.47
EPCAM-205ENST00000474691 IGKV3D-15A0A087WSY6 115 aa12.13□□□□□ -0.47
EPCAM-205ENST00000474691 VSTM5A8MXK1 200 aa12.13□□□□□ -0.47
EPCAM-205ENST00000474691 NDUFS8O00217 210 aa12.13□□□□□ -0.47
EPCAM-205ENST00000474691 DNPH1O43598 174 aa12.13□□□□□ -0.47
EPCAM-205ENST00000474691 EIF1BO60739 113 aaKnown RBP12.13□□□□□ -0.47
EPCAM-205ENST00000474691 ERCC1P07992 297 aaPredicted RBP12.13□□□□□ -0.47
EPCAM-205ENST00000474691 FGF4P08620 206 aa12.13□□□□□ -0.47
EPCAM-205ENST00000474691 UQCRBP14927 111 aa12.13□□□□□ -0.47
EPCAM-205ENST00000474691 CDH2P19022 906 aaPredicted RBP12.13□□□□□ -0.47
EPCAM-205ENST00000474691 THBS2P35442 1172 aa12.13□□□□□ -0.47
EPCAM-205ENST00000474691 CLK1P49759 484 aaKnown RBP12.13□□□□□ -0.47
EPCAM-205ENST00000474691 RPS26P62854 115 aaKnown RBP12.13□□□□□ -0.47
EPCAM-205ENST00000474691 PTGR1Q14914 329 aa12.13□□□□□ -0.47
EPCAM-205ENST00000474691 ZNF141Q15928 474 aa12.13□□□□□ -0.47
EPCAM-205ENST00000474691 SLC46A3Q7Z3Q1 461 aa12.13□□□□□ -0.47
EPCAM-205ENST00000474691 GRINAQ7Z429 371 aa12.13□□□□□ -0.47
EPCAM-205ENST00000474691 ARFGAP2Q8N6H7 521 aa12.13□□□□□ -0.47
EPCAM-205ENST00000474691 ZNF540Q8NDQ6 660 aa12.13□□□□□ -0.47
EPCAM-205ENST00000474691 VPS37AQ8NEZ2 397 aa12.13□□□□□ -0.47
EPCAM-205ENST00000474691 OR52E4Q8NGH9 312 aa12.13□□□□□ -0.47
EPCAM-205ENST00000474691 PSMA8Q8TAA3 256 aa12.13□□□□□ -0.47
EPCAM-205ENST00000474691 XAGE5Q8WWM1 108 aa12.13□□□□□ -0.47
EPCAM-205ENST00000474691 TUBGCP3Q96CW5 907 aa12.13□□□□□ -0.47
EPCAM-205ENST00000474691 MUS81Q96NY9 551 aa12.13□□□□□ -0.47
EPCAM-205ENST00000474691 RHOXF2Q9BQY4 288 aa12.13□□□□□ -0.47
EPCAM-205ENST00000474691 MYOZ1Q9NP98 299 aaPredicted RBP12.13□□□□□ -0.47
EPCAM-205ENST00000474691 WDR45Q9Y484 360 aa12.13□□□□□ -0.47
EPCAM-205ENST00000474691 FREM1Q5H8C1 2179 aa12.12□□□□□ -0.47
EPCAM-205ENST00000474691 RNF103-CHMP3A0A140T963 221 aa12.12□□□□□ -0.47
EPCAM-205ENST00000474691 TMEM233B4DJY2 109 aa12.12□□□□□ -0.47
EPCAM-205ENST00000474691 NPIPB9F8W1W9 429 aa12.12□□□□□ -0.47
EPCAM-205ENST00000474691 ETV2O00321 342 aaPredicted RBP12.12□□□□□ -0.47
EPCAM-205ENST00000474691 NPHS1O60500 1241 aa12.12□□□□□ -0.47
EPCAM-205ENST00000474691 SKAP2O75563 359 aaPredicted RBP12.12□□□□□ -0.47
EPCAM-205ENST00000474691 UGT2B17O75795 530 aa12.12□□□□□ -0.47
EPCAM-205ENST00000474691 TGFAP01135 160 aa12.12□□□□□ -0.47
EPCAM-205ENST00000474691 FAM153BP0C7A2 387 aa12.12□□□□□ -0.47
EPCAM-205ENST00000474691 HTR3AP46098 478 aa12.12□□□□□ -0.47
EPCAM-205ENST00000474691 HBA1P69905 142 aa12.12□□□□□ -0.47
EPCAM-205ENST00000474691 SLC35A1P78382 337 aa12.12□□□□□ -0.47
EPCAM-205ENST00000474691 PCLAFQ15004 111 aa12.12□□□□□ -0.47
EPCAM-205ENST00000474691 GABRA6Q16445 453 aa12.12□□□□□ -0.47
EPCAM-205ENST00000474691 ARHGAP11BQ3KRB8 267 aa12.12□□□□□ -0.47
EPCAM-205ENST00000474691 GPAT3Q53EU6 434 aa12.12□□□□□ -0.47
EPCAM-205ENST00000474691 FAM120AOSQ5T036 256 aa12.12□□□□□ -0.47
EPCAM-205ENST00000474691 B3GLCTQ6Y288 498 aa12.12□□□□□ -0.47
EPCAM-205ENST00000474691 IL17RELQ6ZVW7 336 aa12.12□□□□□ -0.47
EPCAM-205ENST00000474691 KRTCAP2Q8N6L1 136 aa12.12□□□□□ -0.47
EPCAM-205ENST00000474691 ARIH2OSQ8N7S6 290 aa12.12□□□□□ -0.47
EPCAM-205ENST00000474691 C1orf162Q8NEQ5 155 aaPredicted RBP12.12□□□□□ -0.47
EPCAM-205ENST00000474691 OR4A15Q8NGL6 344 aa12.12□□□□□ -0.47
EPCAM-205ENST00000474691 PMM1Q92871 262 aa12.12□□□□□ -0.47
EPCAM-205ENST00000474691 COQ8BQ96D53 544 aa12.12□□□□□ -0.47
EPCAM-205ENST00000474691 OR51I1Q9H343 314 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms