RNA–Protein interactions for RNA: ENST00000474384.2

SNRPB-203, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

TSL 5

Gene SNRPB, Length 985 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-203ENST00000474384 RPS6KA6Q9UK32 745 aa16.3■□□□□ 0.2
SNRPB-203ENST00000474384 SPIN1Q9Y657 262 aaPredicted RBP16.3■□□□□ 0.2
SNRPB-203ENST00000474384 HIVEP3Q5T1R4 2406 aa16.3■□□□□ 0.2
SNRPB-203ENST00000474384 A0A1W2PNR3 127 aa16.29■□□□□ 0.2
SNRPB-203ENST00000474384 CPSF4LA6NMK7 179 aaKnown RBP16.29■□□□□ 0.2
SNRPB-203ENST00000474384 FMO6PO60774 539 aa16.29■□□□□ 0.2
SNRPB-203ENST00000474384 DNAJC8O75937 253 aaPredicted RBP16.29■□□□□ 0.2
SNRPB-203ENST00000474384 GLI4P10075 376 aa16.29■□□□□ 0.2
SNRPB-203ENST00000474384 TFPIP10646 304 aa16.29■□□□□ 0.2
SNRPB-203ENST00000474384 SLC7A1P30825 629 aa16.29■□□□□ 0.2
SNRPB-203ENST00000474384 RASSF2P50749 326 aa16.29■□□□□ 0.2
SNRPB-203ENST00000474384 RPS3AP61247 264 aaKnown RBP16.29■□□□□ 0.2
SNRPB-203ENST00000474384 SRSF1Q07955 248 aaKnown RBP eCLIP16.29■□□□□ 0.2
SNRPB-203ENST00000474384 PMPCAQ10713 525 aa16.29■□□□□ 0.2
SNRPB-203ENST00000474384 SGCBQ16585 318 aa16.29■□□□□ 0.2
SNRPB-203ENST00000474384 SYT14P1Q58G82 188 aa16.29■□□□□ 0.2
SNRPB-203ENST00000474384 ENTPD8Q5MY95 495 aa16.29■□□□□ 0.2
SNRPB-203ENST00000474384 HBMQ6B0K9 141 aa16.29■□□□□ 0.2
SNRPB-203ENST00000474384 MYO7BQ6PIF6 2116 aa16.29■□□□□ 0.2
SNRPB-203ENST00000474384 FKBP9P1Q75LS8 142 aa16.29■□□□□ 0.2
SNRPB-203ENST00000474384 ATG4DQ86TL0 474 aaPredicted RBP16.29■□□□□ 0.2
SNRPB-203ENST00000474384 EID3Q8N140 333 aa16.29■□□□□ 0.2
SNRPB-203ENST00000474384 OR10D3Q8NH80 312 aa16.29■□□□□ 0.2
SNRPB-203ENST00000474384 OR2V1Q8NHB1 315 aa16.29■□□□□ 0.2
SNRPB-203ENST00000474384 DNAJA3Q96EY1 480 aa16.29■□□□□ 0.2
SNRPB-203ENST00000474384 HSH2DQ96JZ2 352 aa16.29■□□□□ 0.2
SNRPB-203ENST00000474384 NSMCE2Q96MF7 247 aa16.29■□□□□ 0.2
SNRPB-203ENST00000474384 OR5B2Q96R09 309 aa16.29■□□□□ 0.2
SNRPB-203ENST00000474384 TTYH2Q9BSA4 534 aa16.29■□□□□ 0.2
SNRPB-203ENST00000474384 OR11A1Q9GZK7 315 aa16.29■□□□□ 0.2
SNRPB-203ENST00000474384 EBAG9O00559 213 aa16.28■□□□□ 0.2
SNRPB-203ENST00000474384 GSC2O15499 205 aa16.28■□□□□ 0.2
SNRPB-203ENST00000474384 CXCL13O43927 109 aa16.28■□□□□ 0.2
SNRPB-203ENST00000474384 CARD18P57730 90 aa16.28■□□□□ 0.2
SNRPB-203ENST00000474384 NUP107P57740 925 aa16.28■□□□□ 0.2
SNRPB-203ENST00000474384 MS4A2Q01362 244 aa16.28■□□□□ 0.2
SNRPB-203ENST00000474384 TRIM25Q14258 630 aaKnown RBP16.28■□□□□ 0.2
SNRPB-203ENST00000474384 IFI44LQ53G44 452 aa16.28■□□□□ 0.2
SNRPB-203ENST00000474384 ALG10BQ5I7T1 473 aa16.28■□□□□ 0.2
SNRPB-203ENST00000474384 PDSS1Q5T2R2 415 aa16.28■□□□□ 0.2
SNRPB-203ENST00000474384 NSUN5P2Q63ZY6 315 aa16.28■□□□□ 0.2
SNRPB-203ENST00000474384 TMEM211Q6ICI0 200 aa16.28■□□□□ 0.2
SNRPB-203ENST00000474384 ULK3Q6PHR2 472 aa16.28■□□□□ 0.2
SNRPB-203ENST00000474384 CYP2R1Q6VVX0 501 aa16.28■□□□□ 0.2
SNRPB-203ENST00000474384 DEF8Q6ZN54 512 aa16.28■□□□□ 0.2
SNRPB-203ENST00000474384 CCDC121Q6ZUS5 278 aa16.28■□□□□ 0.2
SNRPB-203ENST00000474384 SEM1Q6ZVN7 128 aa16.28■□□□□ 0.2
SNRPB-203ENST00000474384 ADGRE4PQ86SQ3 457 aa16.28■□□□□ 0.2
SNRPB-203ENST00000474384 TSPYL5Q86VY4 417 aaPredicted RBP16.28■□□□□ 0.2
SNRPB-203ENST00000474384 FAM86B1Q8N7N1 296 aa16.28■□□□□ 0.2
SNRPB-203ENST00000474384 RNF217Q8TC41 542 aa16.28■□□□□ 0.2
SNRPB-203ENST00000474384 SLC25A43Q8WUT9 341 aaPredicted RBP16.28■□□□□ 0.2
SNRPB-203ENST00000474384 DNAJA4Q8WW22 397 aaPredicted RBP16.28■□□□□ 0.2
SNRPB-203ENST00000474384 OSTF1Q92882 214 aa16.28■□□□□ 0.2
SNRPB-203ENST00000474384 CCDC124Q96CT7 223 aaKnown RBP16.28■□□□□ 0.2
SNRPB-203ENST00000474384 CCDC120Q96HB5 630 aa16.28■□□□□ 0.2
SNRPB-203ENST00000474384 ARL5BQ96KC2 179 aa16.28■□□□□ 0.2
SNRPB-203ENST00000474384 CADM1Q9BY67 442 aaKnown RBP16.28■□□□□ 0.2
SNRPB-203ENST00000474384 COQ10BQ9H8M1 238 aa16.28■□□□□ 0.2
SNRPB-203ENST00000474384 CALHM2Q9HA72 323 aa16.28■□□□□ 0.2
SNRPB-203ENST00000474384 ACTR3BQ9P1U1 418 aa16.28■□□□□ 0.2
SNRPB-203ENST00000474384 SAMD4AQ9UPU9 718 aaKnown RBP16.28■□□□□ 0.2
SNRPB-203ENST00000474384 V9GYQ6 96 aa16.28■□□□□ 0.2
SNRPB-203ENST00000474384 KIAA1549Q9HCM3 1950 aa16.27■□□□□ 0.2
SNRPB-203ENST00000474384 A0A0B4J2E0 115 aa16.27■□□□□ 0.2
SNRPB-203ENST00000474384 A0A1B0GX12 115 aa16.27■□□□□ 0.2
SNRPB-203ENST00000474384 ZC3H12DA2A288 527 aaKnown RBP16.27■□□□□ 0.2
SNRPB-203ENST00000474384 CD8B2A6NJW9 211 aa16.27■□□□□ 0.2
SNRPB-203ENST00000474384 ELOA3DA6NLF2 546 aaPredicted RBP16.27■□□□□ 0.2
SNRPB-203ENST00000474384 ZNF208O43345 1280 aa16.27■□□□□ 0.2
SNRPB-203ENST00000474384 PRKD3O94806 890 aa16.27■□□□□ 0.2
SNRPB-203ENST00000474384 ATP6V1B2P21281 511 aa16.27■□□□□ 0.2
SNRPB-203ENST00000474384 FKBP2P26885 142 aaKnown RBP16.27■□□□□ 0.2
SNRPB-203ENST00000474384 MAP2K6P52564 334 aa16.27■□□□□ 0.2
SNRPB-203ENST00000474384 CDH12P55289 794 aa16.27■□□□□ 0.2
SNRPB-203ENST00000474384 ELOA3BQ3SY89 546 aa16.27■□□□□ 0.2
SNRPB-203ENST00000474384 PPP4R4Q6NUP7 873 aa16.27■□□□□ 0.2
SNRPB-203ENST00000474384 PGM2L1Q6PCE3 622 aa16.27■□□□□ 0.2
SNRPB-203ENST00000474384 ZNF613Q6PF04 617 aa16.27■□□□□ 0.2
SNRPB-203ENST00000474384 DHFR2Q86XF0 187 aa16.27■□□□□ 0.2
SNRPB-203ENST00000474384 ELOA3Q8NG57 546 aa16.27■□□□□ 0.2
SNRPB-203ENST00000474384 ADAMTS16Q8TE57 1224 aa16.27■□□□□ 0.2
SNRPB-203ENST00000474384 PHF10Q8WUB8 498 aaKnown RBP16.27■□□□□ 0.2
SNRPB-203ENST00000474384 GEMIN6Q8WXD5 167 aaKnown RBP16.27■□□□□ 0.2
SNRPB-203ENST00000474384 DDIT4LQ96D03 193 aa16.27■□□□□ 0.2
SNRPB-203ENST00000474384 SLC47A1Q96FL8 570 aa16.27■□□□□ 0.2
SNRPB-203ENST00000474384 UCN2Q96RP3 112 aa16.27■□□□□ 0.2
SNRPB-203ENST00000474384 AMBRA1Q9C0C7 1298 aa16.27■□□□□ 0.2
SNRPB-203ENST00000474384 C12orf10Q9HB07 376 aa16.27■□□□□ 0.2
SNRPB-203ENST00000474384 SELENONQ9NZV5 590 aa16.27■□□□□ 0.2
SNRPB-203ENST00000474384 CLCF1Q9UBD9 225 aa16.27■□□□□ 0.2
SNRPB-203ENST00000474384 PHF3Q92576 2039 aaKnown RBP16.26■□□□□ 0.19
SNRPB-203ENST00000474384 SLC22A20A6NK97 555 aa16.26■□□□□ 0.19
SNRPB-203ENST00000474384 AGFG2O95081 481 aa16.26■□□□□ 0.19
SNRPB-203ENST00000474384 TGM6O95932 706 aa16.26■□□□□ 0.19
SNRPB-203ENST00000474384 THY1P04216 161 aa16.26■□□□□ 0.19
SNRPB-203ENST00000474384 IFNW1P05000 195 aa16.26■□□□□ 0.19
SNRPB-203ENST00000474384 PNMTP11086 282 aa16.26■□□□□ 0.19
SNRPB-203ENST00000474384 CLK1P49759 484 aaKnown RBP16.26■□□□□ 0.19
SNRPB-203ENST00000474384 ADORA2A-AS1P86434 159 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms