RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 SLC25A53Q5H9E4 307 aa16.18■□□□□ 0.18
SNX4-204ENST00000473417 RNF220Q5VTB9 566 aa16.18■□□□□ 0.18
SNX4-204ENST00000473417 OR2A2Q6IF42 318 aa16.18■□□□□ 0.18
SNX4-204ENST00000473417 P4HA3Q7Z4N8 544 aa16.18■□□□□ 0.18
SNX4-204ENST00000473417 NET1Q7Z628 596 aaPredicted RBP16.18■□□□□ 0.18
SNX4-204ENST00000473417 GGNQ86UU5 652 aa16.18■□□□□ 0.18
SNX4-204ENST00000473417 KRT73Q86Y46 540 aa16.18■□□□□ 0.18
SNX4-204ENST00000473417 LILRA2Q8N149 483 aa16.18■□□□□ 0.18
SNX4-204ENST00000473417 LINC01560Q8TB33 94 aa16.18■□□□□ 0.18
SNX4-204ENST00000473417 ST8SIA1Q92185 356 aa16.18■□□□□ 0.18
SNX4-204ENST00000473417 ZNF845Q96IR2 970 aaPredicted RBP16.18■□□□□ 0.18
SNX4-204ENST00000473417 FOXC2Q99958 501 aa16.18■□□□□ 0.18
SNX4-204ENST00000473417 SPATA9Q9BWV2 254 aa16.18■□□□□ 0.18
SNX4-204ENST00000473417 PINK1Q9BXM7 581 aa16.18■□□□□ 0.18
SNX4-204ENST00000473417 ARMC7Q9H6L4 198 aa16.18■□□□□ 0.18
SNX4-204ENST00000473417 EFCAB1Q9HAE3 211 aa16.18■□□□□ 0.18
SNX4-204ENST00000473417 CCM2LQ9NUG4 571 aaPredicted RBP16.18■□□□□ 0.18
SNX4-204ENST00000473417 ACER3Q9NUN7 267 aa16.18■□□□□ 0.18
SNX4-204ENST00000473417 FLNAP21333 2647 aaKnown RBP16.17■□□□□ 0.18
SNX4-204ENST00000473417 CFAP73A6NFT4 308 aa16.17■□□□□ 0.18
SNX4-204ENST00000473417 A8MXE2 369 aa16.17■□□□□ 0.18
SNX4-204ENST00000473417 FAM107AO95990 144 aa16.17■□□□□ 0.18
SNX4-204ENST00000473417 ELK4P28324 431 aa16.17■□□□□ 0.18
SNX4-204ENST00000473417 SHC1P29353 583 aa16.17■□□□□ 0.18
SNX4-204ENST00000473417 EIF1AXP47813 144 aaKnown RBP16.17■□□□□ 0.18
SNX4-204ENST00000473417 RPS3AP61247 264 aaKnown RBP16.17■□□□□ 0.18
SNX4-204ENST00000473417 MERTKQ12866 999 aa16.17■□□□□ 0.18
SNX4-204ENST00000473417 SGCBQ16585 318 aa16.17■□□□□ 0.18
SNX4-204ENST00000473417 PLEKHM3Q6ZWE6 761 aa16.17■□□□□ 0.18
SNX4-204ENST00000473417 CMTM5Q96DZ9 223 aa16.17■□□□□ 0.18
SNX4-204ENST00000473417 SPATA5L1Q9BVQ7 753 aa16.17■□□□□ 0.18
SNX4-204ENST00000473417 RSPO3Q9BXY4 272 aaPredicted RBP16.17■□□□□ 0.18
SNX4-204ENST00000473417 A0A0J9YW62 118 aa16.16■□□□□ 0.18
SNX4-204ENST00000473417 ETV2O00321 342 aaPredicted RBP16.16■□□□□ 0.18
SNX4-204ENST00000473417 TNFSF11O14788 317 aa16.16■□□□□ 0.18
SNX4-204ENST00000473417 MSTNO14793 375 aa16.16■□□□□ 0.18
SNX4-204ENST00000473417 FRS3O43559 492 aa16.16■□□□□ 0.18
SNX4-204ENST00000473417 TPST1O60507 370 aa16.16■□□□□ 0.18
SNX4-204ENST00000473417 SHOX2O60902 331 aaPredicted RBP16.16■□□□□ 0.18
SNX4-204ENST00000473417 SERPINB7O75635 380 aa16.16■□□□□ 0.18
SNX4-204ENST00000473417 DCTN3O75935 186 aa16.16■□□□□ 0.18
SNX4-204ENST00000473417 PRDX6P30041 224 aa16.16■□□□□ 0.18
SNX4-204ENST00000473417 NUDT2P50583 147 aa16.16■□□□□ 0.18
SNX4-204ENST00000473417 EPS8Q12929 822 aa16.16■□□□□ 0.18
SNX4-204ENST00000473417 ZSWIM7Q19AV6 140 aa16.16■□□□□ 0.18
SNX4-204ENST00000473417 VMACQ2NL98 169 aa16.16■□□□□ 0.18
SNX4-204ENST00000473417 TMEM176BQ3YBM2 270 aaPredicted RBP16.16■□□□□ 0.18
SNX4-204ENST00000473417 GKAP1Q5VSY0 366 aaPredicted RBP16.16■□□□□ 0.18
SNX4-204ENST00000473417 PPP4R4Q6NUP7 873 aa16.16■□□□□ 0.18
SNX4-204ENST00000473417 VWA1Q6PCB0 445 aa16.16■□□□□ 0.18
SNX4-204ENST00000473417 PAMR1Q6UXH9 720 aa16.16■□□□□ 0.18
SNX4-204ENST00000473417 CALHM3Q86XJ0 350 aa16.16■□□□□ 0.18
SNX4-204ENST00000473417 ZNF440Q8IYI8 595 aa16.16■□□□□ 0.18
SNX4-204ENST00000473417 OR10D3Q8NH80 312 aa16.16■□□□□ 0.18
SNX4-204ENST00000473417 FIG4Q92562 907 aa16.16■□□□□ 0.18
SNX4-204ENST00000473417 ADGRG7Q96K78 797 aa16.16■□□□□ 0.18
SNX4-204ENST00000473417 KLHL15Q96M94 604 aa16.16■□□□□ 0.18
SNX4-204ENST00000473417 DACH2Q96NX9 599 aa16.16■□□□□ 0.18
SNX4-204ENST00000473417 LRRC37BQ96QE4 947 aa16.16■□□□□ 0.18
SNX4-204ENST00000473417 ZNF607Q96SK3 696 aa16.16■□□□□ 0.18
SNX4-204ENST00000473417 SERINC1Q9NRX5 453 aa16.16■□□□□ 0.18
SNX4-204ENST00000473417 EDARQ9UNE0 448 aa16.16■□□□□ 0.18
SNX4-204ENST00000473417 USP22Q9UPT9 525 aa16.16■□□□□ 0.18
SNX4-204ENST00000473417 PLEKHA6Q9Y2H5 1048 aa16.16■□□□□ 0.18
SNX4-204ENST00000473417 ZNF175Q9Y473 711 aa16.16■□□□□ 0.18
SNX4-204ENST00000473417 SH3D21A4FU49 640 aa16.15■□□□□ 0.18
SNX4-204ENST00000473417 CCT8L1PA6NM43 557 aa16.15■□□□□ 0.18
SNX4-204ENST00000473417 M0QX08 132 aa16.15■□□□□ 0.18
SNX4-204ENST00000473417 GCM2O75603 506 aaPredicted RBP16.15■□□□□ 0.18
SNX4-204ENST00000473417 OPN1SWP03999 348 aa16.15■□□□□ 0.18
SNX4-204ENST00000473417 PRG2P13727 222 aa16.15■□□□□ 0.18
SNX4-204ENST00000473417 UQCRBP14927 111 aa16.15■□□□□ 0.18
SNX4-204ENST00000473417 PRKAR1BP31321 381 aa16.15■□□□□ 0.18
SNX4-204ENST00000473417 PCGF2P35227 344 aa16.15■□□□□ 0.18
SNX4-204ENST00000473417 ACAA2P42765 397 aaKnown RBP16.15■□□□□ 0.18
SNX4-204ENST00000473417 PCBP3P57721 371 aaKnown RBP16.15■□□□□ 0.18
SNX4-204ENST00000473417 HOXC5Q00444 222 aa16.15■□□□□ 0.18
SNX4-204ENST00000473417 DMTNQ08495 405 aa16.15■□□□□ 0.18
SNX4-204ENST00000473417 SELENBP1Q13228 472 aa16.15■□□□□ 0.18
SNX4-204ENST00000473417 PON3Q15166 354 aa16.15■□□□□ 0.18
SNX4-204ENST00000473417 CTU2Q2VPK5 515 aaKnown RBP16.15■□□□□ 0.18
SNX4-204ENST00000473417 GLIPR1L2Q4G1C9 344 aa16.15■□□□□ 0.18
SNX4-204ENST00000473417 HBMQ6B0K9 141 aa16.15■□□□□ 0.18
SNX4-204ENST00000473417 ESPNLQ6ZVH7 1005 aa16.15■□□□□ 0.18
SNX4-204ENST00000473417 ZNF550Q7Z398 422 aa16.15■□□□□ 0.18
SNX4-204ENST00000473417 GRINAQ7Z429 371 aa16.15■□□□□ 0.18
SNX4-204ENST00000473417 LSRQ86X29 649 aaPredicted RBP16.15■□□□□ 0.18
SNX4-204ENST00000473417 OR2V1Q8NHB1 315 aa16.15■□□□□ 0.18
SNX4-204ENST00000473417 STARD4Q96DR4 205 aa16.15■□□□□ 0.18
SNX4-204ENST00000473417 ZNF583Q96ND8 569 aa16.15■□□□□ 0.18
SNX4-204ENST00000473417 RNF122Q9H9V4 155 aa16.15■□□□□ 0.18
SNX4-204ENST00000473417 CTPS2Q9NRF8 586 aa16.15■□□□□ 0.18
SNX4-204ENST00000473417 CMTM6Q9NX76 183 aa16.15■□□□□ 0.18
SNX4-204ENST00000473417 PRORSD1PA6NEY8 169 aa16.14■□□□□ 0.17
SNX4-204ENST00000473417 GJE1A6NN92 205 aa16.14■□□□□ 0.17
SNX4-204ENST00000473417 ADAMDEC1O15204 470 aa16.14■□□□□ 0.17
SNX4-204ENST00000473417 CXCL13O43927 109 aa16.14■□□□□ 0.17
SNX4-204ENST00000473417 MFN2O95140 757 aa16.14■□□□□ 0.17
SNX4-204ENST00000473417 CCNA2P20248 432 aa16.14■□□□□ 0.17
SNX4-204ENST00000473417 DNASE1P24855 282 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms