RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 BPIFA1Q9NP55 256 aa9.36□□□□□ -0.91
APTX-216ENST00000472896 SLC6A20Q9NP91 592 aa9.36□□□□□ -0.91
APTX-216ENST00000472896 ARL15Q9NXU5 204 aa9.36□□□□□ -0.91
APTX-216ENST00000472896 ABRACLQ9P1F3 81 aa9.36□□□□□ -0.91
APTX-216ENST00000472896 RHCGQ9UBD6 479 aa9.36□□□□□ -0.91
APTX-216ENST00000472896 EDARQ9UNE0 448 aa9.36□□□□□ -0.91
APTX-216ENST00000472896 NPFFR2Q9Y5X5 522 aa9.36□□□□□ -0.91
APTX-216ENST00000472896 DOCK4Q8N1I0 1966 aa9.35□□□□□ -0.91
APTX-216ENST00000472896 A0A0G2JPF8 293 aa9.35□□□□□ -0.91
APTX-216ENST00000472896 TRAPPC13A5PLN9 417 aa9.35□□□□□ -0.91
APTX-216ENST00000472896 MGAT4DA6NG13 374 aa9.35□□□□□ -0.91
APTX-216ENST00000472896 CD8B2A6NJW9 211 aa9.35□□□□□ -0.91
APTX-216ENST00000472896 HNRNPCL3B7ZW38 293 aa9.35□□□□□ -0.91
APTX-216ENST00000472896 MID1O15344 667 aa9.35□□□□□ -0.91
APTX-216ENST00000472896 RNF13O43567 381 aa9.35□□□□□ -0.91
APTX-216ENST00000472896 IGHA1P01876 353 aa9.35□□□□□ -0.91
APTX-216ENST00000472896 IGFBP1P08833 259 aaPredicted RBP9.35□□□□□ -0.91
APTX-216ENST00000472896 UBBP0CG47 229 aa9.35□□□□□ -0.91
APTX-216ENST00000472896 UBCP0CG48 685 aaKnown RBP9.35□□□□□ -0.91
APTX-216ENST00000472896 HNRNPCL4P0DMR1 293 aa9.35□□□□□ -0.91
APTX-216ENST00000472896 SAGP10523 405 aaPredicted RBP9.35□□□□□ -0.91
APTX-216ENST00000472896 CD8BP10966 210 aa9.35□□□□□ -0.91
APTX-216ENST00000472896 CELP19835 753 aa9.35□□□□□ -0.91
APTX-216ENST00000472896 POU3F2P20265 443 aaPredicted RBP9.35□□□□□ -0.91
APTX-216ENST00000472896 RAB3BP20337 219 aa9.35□□□□□ -0.91
APTX-216ENST00000472896 PVALBP20472 110 aaPredicted RBP9.35□□□□□ -0.91
APTX-216ENST00000472896 PSMB1P20618 241 aaKnown RBP9.35□□□□□ -0.91
APTX-216ENST00000472896 AOAHP28039 575 aa9.35□□□□□ -0.91
APTX-216ENST00000472896 HNF1BP35680 557 aa9.35□□□□□ -0.91
APTX-216ENST00000472896 MECP2P51608 486 aaKnown RBP9.35□□□□□ -0.91
APTX-216ENST00000472896 CCR6P51684 374 aa9.35□□□□□ -0.91
APTX-216ENST00000472896 LIM2P55344 173 aa9.35□□□□□ -0.91
APTX-216ENST00000472896 GMFBP60983 142 aa9.35□□□□□ -0.91
APTX-216ENST00000472896 RPS27AP62979 156 aaKnown RBP9.35□□□□□ -0.91
APTX-216ENST00000472896 UBA52P62987 128 aaKnown RBP9.35□□□□□ -0.91
APTX-216ENST00000472896 ZNF155Q12901 538 aaPredicted RBP9.35□□□□□ -0.91
APTX-216ENST00000472896 LY6DQ14210 128 aa9.35□□□□□ -0.91
APTX-216ENST00000472896 SF1Q15637 639 aaKnown RBP9.35□□□□□ -0.91
APTX-216ENST00000472896 CHRNA6Q15825 494 aa9.35□□□□□ -0.91
APTX-216ENST00000472896 ENTPD8Q5MY95 495 aa9.35□□□□□ -0.91
APTX-216ENST00000472896 C10orf120Q5SQS8 335 aa9.35□□□□□ -0.91
APTX-216ENST00000472896 ELP2Q6IA86 826 aa9.35□□□□□ -0.91
APTX-216ENST00000472896 REEP3Q6NUK4 255 aa9.35□□□□□ -0.91
APTX-216ENST00000472896 CDC73Q6P1J9 531 aa9.35□□□□□ -0.91
APTX-216ENST00000472896 HAGHLQ6PII5 290 aaPredicted RBP9.35□□□□□ -0.91
APTX-216ENST00000472896 SERPINA13PQ6UXR4 307 aa9.35□□□□□ -0.91
APTX-216ENST00000472896 GLDNQ6ZMI3 551 aaPredicted RBP9.35□□□□□ -0.91
APTX-216ENST00000472896 ARMC10Q8N2F6 343 aa9.35□□□□□ -0.91
APTX-216ENST00000472896 SVBPQ8N300 66 aa9.35□□□□□ -0.91
APTX-216ENST00000472896 LILRB2Q8N423 598 aa9.35□□□□□ -0.91
APTX-216ENST00000472896 C12orf45Q8N5I9 185 aaPredicted RBP9.35□□□□□ -0.91
APTX-216ENST00000472896 TRMT10AQ8TBZ6 339 aaKnown RBP9.35□□□□□ -0.91
APTX-216ENST00000472896 LKAAEAR1Q8TD35 194 aa9.35□□□□□ -0.91
APTX-216ENST00000472896 CYB5D2Q8WUJ1 264 aa9.35□□□□□ -0.91
APTX-216ENST00000472896 SFT2D1Q8WV19 159 aa9.35□□□□□ -0.91
APTX-216ENST00000472896 SLC5A11Q8WWX8 675 aa9.35□□□□□ -0.91
APTX-216ENST00000472896 TCEAL7Q9BRU2 100 aa9.35□□□□□ -0.91
APTX-216ENST00000472896 SLC12A9Q9BXP2 914 aa9.35□□□□□ -0.91
APTX-216ENST00000472896 TEX10Q9NXF1 929 aaPredicted RBP9.35□□□□□ -0.91
APTX-216ENST00000472896 FBXW2Q9UKT8 454 aa9.35□□□□□ -0.91
APTX-216ENST00000472896 ACSL6Q9UKU0 697 aa9.35□□□□□ -0.91
APTX-216ENST00000472896 SLC9A8Q9Y2E8 581 aa9.35□□□□□ -0.91
APTX-216ENST00000472896 HECTD1Q9ULT8 2610 aa9.35□□□□□ -0.91
APTX-216ENST00000472896 COL5A1P20908 1838 aaPredicted RBP9.35□□□□□ -0.91
APTX-216ENST00000472896 ARID1BQ8NFD5 2236 aaPredicted RBP9.35□□□□□ -0.91
APTX-216ENST00000472896 C2orf92A0A1B0GVN3 265 aa9.35□□□□□ -0.91
APTX-216ENST00000472896 SULT1C2O00338 296 aa9.35□□□□□ -0.91
APTX-216ENST00000472896 ZNF749O43361 778 aa9.35□□□□□ -0.91
APTX-216ENST00000472896 KDELR3O43731 214 aa9.35□□□□□ -0.91
APTX-216ENST00000472896 CREBL2O60519 120 aaPredicted RBP9.35□□□□□ -0.91
APTX-216ENST00000472896 NME6O75414 186 aaPredicted RBP9.35□□□□□ -0.91
APTX-216ENST00000472896 REM1O75628 298 aa9.35□□□□□ -0.91
APTX-216ENST00000472896 CDC123O75794 336 aaPredicted RBP9.35□□□□□ -0.91
APTX-216ENST00000472896 ATG12O94817 140 aa9.35□□□□□ -0.91
APTX-216ENST00000472896 RLN2P04090 185 aa9.35□□□□□ -0.91
APTX-216ENST00000472896 ANXA4P09525 319 aaPredicted RBP9.35□□□□□ -0.91
APTX-216ENST00000472896 CD3GP09693 182 aa9.35□□□□□ -0.91
APTX-216ENST00000472896 MPC1LP0DKB6 136 aa9.35□□□□□ -0.91
APTX-216ENST00000472896 S100PP25815 95 aa9.35□□□□□ -0.91
APTX-216ENST00000472896 SOX18P35713 384 aa9.35□□□□□ -0.91
APTX-216ENST00000472896 GDI2P50395 445 aaKnown RBP9.35□□□□□ -0.91
APTX-216ENST00000472896 CCR9P51686 369 aa9.35□□□□□ -0.91
APTX-216ENST00000472896 ERVK-25P63136 954 aa9.35□□□□□ -0.91
APTX-216ENST00000472896 LGALS3BPQ08380 585 aa9.35□□□□□ -0.91
APTX-216ENST00000472896 MPPE1Q53F39 396 aa9.35□□□□□ -0.91
APTX-216ENST00000472896 KIAA0895LQ68EN5 471 aa9.35□□□□□ -0.91
APTX-216ENST00000472896 DHRS7BQ6IAN0 325 aaPredicted RBP9.35□□□□□ -0.91
APTX-216ENST00000472896 ADNP2Q6IQ32 1131 aa9.35□□□□□ -0.91
APTX-216ENST00000472896 SFXN4Q6P4A7 337 aa9.35□□□□□ -0.91
APTX-216ENST00000472896 Q6ZTK2 550 aa9.35□□□□□ -0.91
APTX-216ENST00000472896 CIR1Q86X95 450 aaPredicted RBP9.35□□□□□ -0.91
APTX-216ENST00000472896 SKA3Q8IX90 412 aa9.35□□□□□ -0.91
APTX-216ENST00000472896 MEIOBQ8N635 442 aa9.35□□□□□ -0.91
APTX-216ENST00000472896 ZFP41Q8N8Y5 198 aa9.35□□□□□ -0.91
APTX-216ENST00000472896 TEX19Q8NA77 164 aa9.35□□□□□ -0.91
APTX-216ENST00000472896 CDC26Q8NHZ8 85 aa9.35□□□□□ -0.91
APTX-216ENST00000472896 ELP5Q8TE02 316 aa9.35□□□□□ -0.91
APTX-216ENST00000472896 PNPLA2Q96AD5 504 aa9.35□□□□□ -0.91
APTX-216ENST00000472896 SGK3Q96BR1 496 aa9.35□□□□□ -0.91
APTX-216ENST00000472896 BBS4Q96RK4 519 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms