RNA–Protein interactions for RNA: ENST00000472627.1

SMURF1-203, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene SMURF1, Length 825 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-203ENST00000472627 CYP7B1O75881 506 aa12.12□□□□□ -0.47
SMURF1-203ENST00000472627 SLU7O95391 586 aaKnown RBP12.12□□□□□ -0.47
SMURF1-203ENST00000472627 PMS2P2O95744 297 aa12.12□□□□□ -0.47
SMURF1-203ENST00000472627 BCL10O95999 233 aa12.12□□□□□ -0.47
SMURF1-203ENST00000472627 TFP02787 698 aa12.12□□□□□ -0.47
SMURF1-203ENST00000472627 MRPS25P82663 173 aaKnown RBP12.12□□□□□ -0.47
SMURF1-203ENST00000472627 SLC25A3Q00325 362 aa12.12□□□□□ -0.47
SMURF1-203ENST00000472627 LASP1Q14847 261 aaKnown RBP12.12□□□□□ -0.47
SMURF1-203ENST00000472627 UNC50Q53HI1 259 aa12.12□□□□□ -0.47
SMURF1-203ENST00000472627 DCST2Q5T1A1 773 aa12.12□□□□□ -0.47
SMURF1-203ENST00000472627 THSD4Q6ZMP0 1018 aa12.12□□□□□ -0.47
SMURF1-203ENST00000472627 GAS2L3Q86XJ1 694 aa12.12□□□□□ -0.47
SMURF1-203ENST00000472627 FBXO25Q8TCJ0 367 aa12.12□□□□□ -0.47
SMURF1-203ENST00000472627 ADAMTS15Q8TE58 950 aa12.12□□□□□ -0.47
SMURF1-203ENST00000472627 CIDECQ96AQ7 238 aaPredicted RBP12.12□□□□□ -0.47
SMURF1-203ENST00000472627 C16orf58Q96GQ5 468 aa12.12□□□□□ -0.47
SMURF1-203ENST00000472627 TMEM237Q96Q45 408 aa12.12□□□□□ -0.47
SMURF1-203ENST00000472627 QRSL1Q9H0R6 528 aaKnown RBP12.12□□□□□ -0.47
SMURF1-203ENST00000472627 ACSS3Q9H6R3 686 aa12.12□□□□□ -0.47
SMURF1-203ENST00000472627 HDGFL3Q9Y3E1 203 aa12.12□□□□□ -0.47
SMURF1-203ENST00000472627 TRAV20A0A0B4J274 112 aa12.11□□□□□ -0.47
SMURF1-203ENST00000472627 IGHV1-18A0A0C4DH31 117 aa12.11□□□□□ -0.47
SMURF1-203ENST00000472627 EIF1BO60739 113 aaKnown RBP12.11□□□□□ -0.47
SMURF1-203ENST00000472627 KRT33AO76009 404 aa12.11□□□□□ -0.47
SMURF1-203ENST00000472627 PNPP00491 289 aa12.11□□□□□ -0.47
SMURF1-203ENST00000472627 HMGN2P05204 90 aaKnown RBP12.11□□□□□ -0.47
SMURF1-203ENST00000472627 CDH2P19022 906 aaPredicted RBP12.11□□□□□ -0.47
SMURF1-203ENST00000472627 NPR2P20594 1047 aa12.11□□□□□ -0.47
SMURF1-203ENST00000472627 IMPDH1P20839 514 aa12.11□□□□□ -0.47
SMURF1-203ENST00000472627 APOBEC1P41238 236 aaKnown RBP12.11□□□□□ -0.47
SMURF1-203ENST00000472627 CLK1P49759 484 aaKnown RBP12.11□□□□□ -0.47
SMURF1-203ENST00000472627 RNF144AP50876 292 aaPredicted RBP12.11□□□□□ -0.47
SMURF1-203ENST00000472627 SESN3P58005 492 aa12.11□□□□□ -0.47
SMURF1-203ENST00000472627 IL1RL1Q01638 556 aa12.11□□□□□ -0.47
SMURF1-203ENST00000472627 RIN1Q13671 783 aa12.11□□□□□ -0.47
SMURF1-203ENST00000472627 TRIP10Q15642 601 aa12.11□□□□□ -0.47
SMURF1-203ENST00000472627 NDUFAF6Q330K2 333 aa12.11□□□□□ -0.47
SMURF1-203ENST00000472627 FAM219BQ5XKK7 198 aa12.11□□□□□ -0.47
SMURF1-203ENST00000472627 REP15Q6BDI9 236 aa12.11□□□□□ -0.47
SMURF1-203ENST00000472627 FAHD2BQ6P2I3 314 aaPredicted RBP12.11□□□□□ -0.47
SMURF1-203ENST00000472627 BPIFB2Q8N4F0 458 aa12.11□□□□□ -0.47
SMURF1-203ENST00000472627 POMGNT2Q8NAT1 580 aa12.11□□□□□ -0.47
SMURF1-203ENST00000472627 NUP37Q8NFH4 326 aa12.11□□□□□ -0.47
SMURF1-203ENST00000472627 DCAKDQ8WVC6 231 aa12.11□□□□□ -0.47
SMURF1-203ENST00000472627 FAHD2AQ96GK7 314 aa12.11□□□□□ -0.47
SMURF1-203ENST00000472627 ZNF317Q96PQ6 595 aaPredicted RBP12.11□□□□□ -0.47
SMURF1-203ENST00000472627 LRRC37BQ96QE4 947 aa12.11□□□□□ -0.47
SMURF1-203ENST00000472627 NAA11Q9BSU3 229 aaPredicted RBP12.11□□□□□ -0.47
SMURF1-203ENST00000472627 THUMPD3Q9BV44 507 aaKnown RBP12.11□□□□□ -0.47
SMURF1-203ENST00000472627 REEP4Q9H6H4 257 aa12.11□□□□□ -0.47
SMURF1-203ENST00000472627 ZNF442Q9H7R0 627 aa12.11□□□□□ -0.47
SMURF1-203ENST00000472627 MID1IP1Q9NPA3 183 aa12.11□□□□□ -0.47
SMURF1-203ENST00000472627 SLC7A10Q9NS82 523 aa12.11□□□□□ -0.47
SMURF1-203ENST00000472627 DDX28Q9NUL7 540 aaKnown RBP12.11□□□□□ -0.47
SMURF1-203ENST00000472627 KLF11O14901 512 aa12.1□□□□□ -0.47
SMURF1-203ENST00000472627 RAD51CO43502 376 aa12.1□□□□□ -0.47
SMURF1-203ENST00000472627 SEC22BO75396 215 aa12.1□□□□□ -0.47
SMURF1-203ENST00000472627 GSTA1P08263 222 aa12.1□□□□□ -0.47
SMURF1-203ENST00000472627 ANPEPP15144 967 aa12.1□□□□□ -0.47
SMURF1-203ENST00000472627 ATP5F1P24539 256 aaPredicted RBP12.1□□□□□ -0.47
SMURF1-203ENST00000472627 GPR6P46095 362 aaPredicted RBP12.1□□□□□ -0.47
SMURF1-203ENST00000472627 FOXG1P55316 489 aaPredicted RBP12.1□□□□□ -0.47
SMURF1-203ENST00000472627 TP53BP2Q13625 1128 aa12.1□□□□□ -0.47
SMURF1-203ENST00000472627 ADRM1Q16186 407 aa12.1□□□□□ -0.47
SMURF1-203ENST00000472627 C3orf36Q3SXR2 165 aa12.1□□□□□ -0.47
SMURF1-203ENST00000472627 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.1□□□□□ -0.471e-6■■■■■ 37.7
SMURF1-203ENST00000472627 ANKRD26P1Q6NSI1 321 aa12.1□□□□□ -0.47
SMURF1-203ENST00000472627 TRIM46Q7Z4K8 759 aa12.1□□□□□ -0.47
SMURF1-203ENST00000472627 SPATA21Q7Z572 469 aa12.1□□□□□ -0.47
SMURF1-203ENST00000472627 OR56A1Q8NGH5 318 aa12.1□□□□□ -0.47
SMURF1-203ENST00000472627 ZNF563Q8TA94 476 aa12.1□□□□□ -0.47
SMURF1-203ENST00000472627 FAM120BQ96EK7 910 aaKnown RBP12.1□□□□□ -0.47
SMURF1-203ENST00000472627 KCNA7Q96RP8 456 aa12.1□□□□□ -0.47
SMURF1-203ENST00000472627 NAPGQ99747 312 aaPredicted RBP12.1□□□□□ -0.47
SMURF1-203ENST00000472627 CCT7Q99832 543 aa12.1□□□□□ -0.47
SMURF1-203ENST00000472627 ACTRT3Q9BYD9 372 aa12.1□□□□□ -0.47
SMURF1-203ENST00000472627 LAT2Q9GZY6 243 aa12.1□□□□□ -0.47
SMURF1-203ENST00000472627 CDC42EP4Q9H3Q1 356 aaKnown RBP12.1□□□□□ -0.47
SMURF1-203ENST00000472627 LPAR2Q9HBW0 351 aa12.1□□□□□ -0.47
SMURF1-203ENST00000472627 SLC52A3Q9NQ40 469 aa12.1□□□□□ -0.47
SMURF1-203ENST00000472627 ACER3Q9NUN7 267 aa12.1□□□□□ -0.47
SMURF1-203ENST00000472627 TMEM45AQ9NWC5 275 aa12.1□□□□□ -0.47
SMURF1-203ENST00000472627 CHRNA9Q9UGM1 479 aa12.1□□□□□ -0.47
SMURF1-203ENST00000472627 PKD1L1Q8TDX9 2849 aa12.1□□□□□ -0.47
SMURF1-203ENST00000472627 TBX19O60806 448 aa12.09□□□□□ -0.47
SMURF1-203ENST00000472627 SAGP10523 405 aaPredicted RBP12.09□□□□□ -0.47
SMURF1-203ENST00000472627 FRKP42685 505 aaPredicted RBP12.09□□□□□ -0.47
SMURF1-203ENST00000472627 OR2B6P58173 313 aa12.09□□□□□ -0.47
SMURF1-203ENST00000472627 NAA20P61599 178 aa12.09□□□□□ -0.47
SMURF1-203ENST00000472627 SLC35A1P78382 337 aa12.09□□□□□ -0.47
SMURF1-203ENST00000472627 NAAAQ02083 359 aa12.09□□□□□ -0.47
SMURF1-203ENST00000472627 SPDYE7PQ495Y7 208 aa12.09□□□□□ -0.47
SMURF1-203ENST00000472627 HIKESHIQ53FT3 197 aa12.09□□□□□ -0.47
SMURF1-203ENST00000472627 EXOSC6Q5RKV6 272 aaKnown RBP12.09□□□□□ -0.47
SMURF1-203ENST00000472627 TSPO2Q5TGU0 170 aa12.09□□□□□ -0.47
SMURF1-203ENST00000472627 RBMS3Q6XE24 437 aaKnown RBP12.09□□□□□ -0.47
SMURF1-203ENST00000472627 R3HCC1LQ7Z5L2 792 aaKnown RBP12.09□□□□□ -0.47
SMURF1-203ENST00000472627 LCA5Q86VQ0 697 aa12.09□□□□□ -0.47
SMURF1-203ENST00000472627 BOD1Q96IK1 185 aa12.09□□□□□ -0.47
SMURF1-203ENST00000472627 NTN4Q9HB63 628 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms