RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 PAX1P15863 534 aa7.12□□□□□ -1.27
USP48-207ENST00000471752 ELK4P28324 431 aa7.12□□□□□ -1.27
USP48-207ENST00000471752 SLC7A1P30825 629 aa7.12□□□□□ -1.27
USP48-207ENST00000471752 RPL3P39023 403 aaKnown RBP7.12□□□□□ -1.27
USP48-207ENST00000471752 IDH2P48735 452 aaKnown RBP7.12□□□□□ -1.27
USP48-207ENST00000471752 KCNJ10P78508 379 aa7.12□□□□□ -1.27
USP48-207ENST00000471752 HOXC5Q00444 222 aa7.12□□□□□ -1.27
USP48-207ENST00000471752 BNIP2Q12982 314 aa7.12□□□□□ -1.27
USP48-207ENST00000471752 STX3Q13277 289 aa7.12□□□□□ -1.27
USP48-207ENST00000471752 ITGADQ13349 1161 aa7.12□□□□□ -1.27
USP48-207ENST00000471752 CBFBQ13951 182 aa7.12□□□□□ -1.27
USP48-207ENST00000471752 RNPS1Q15287 305 aaKnown RBP7.12□□□□□ -1.27
USP48-207ENST00000471752 ZNF672Q499Z4 452 aaPredicted RBP7.12□□□□□ -1.27
USP48-207ENST00000471752 PDSS1Q5T2R2 415 aa7.12□□□□□ -1.27
USP48-207ENST00000471752 AP1ARQ63HQ0 302 aa7.12□□□□□ -1.27
USP48-207ENST00000471752 PRSS57Q6UWY2 283 aa7.12□□□□□ -1.27
USP48-207ENST00000471752 B3GLCTQ6Y288 498 aa7.12□□□□□ -1.27
USP48-207ENST00000471752 EIF3MQ7L2H7 374 aaKnown RBP7.12□□□□□ -1.27
USP48-207ENST00000471752 C16orf62Q7Z3J2 963 aa7.12□□□□□ -1.27
USP48-207ENST00000471752 VRK2Q86Y07 508 aa7.12□□□□□ -1.27
USP48-207ENST00000471752 C10orf111Q8N326 155 aa7.12□□□□□ -1.27
USP48-207ENST00000471752 CLIP4Q8N3C7 705 aa7.12□□□□□ -1.27
USP48-207ENST00000471752 WDR31Q8NA23 367 aa7.12□□□□□ -1.27
USP48-207ENST00000471752 TOR1AIP2Q8NFQ8 470 aa7.12□□□□□ -1.27
USP48-207ENST00000471752 STEAP2Q8NFT2 490 aa7.12□□□□□ -1.27
USP48-207ENST00000471752 OR9I1Q8NGQ6 314 aa7.12□□□□□ -1.27
USP48-207ENST00000471752 SMAP2Q8WU79 429 aaPredicted RBP7.12□□□□□ -1.27
USP48-207ENST00000471752 CPNE4Q96A23 557 aaPredicted RBP7.12□□□□□ -1.27
USP48-207ENST00000471752 VPS33AQ96AX1 596 aa7.12□□□□□ -1.27
USP48-207ENST00000471752 DTNBP1Q96EV8 351 aa7.12□□□□□ -1.27
USP48-207ENST00000471752 AURKBQ96GD4 344 aaPredicted RBP7.12□□□□□ -1.27
USP48-207ENST00000471752 REXO5Q96IC2 774 aaKnown RBP7.12□□□□□ -1.27
USP48-207ENST00000471752 CCDC115Q96NT0 180 aa7.12□□□□□ -1.27
USP48-207ENST00000471752 OR52B2Q96RD2 323 aa7.12□□□□□ -1.27
USP48-207ENST00000471752 SLC35A5Q9BS91 424 aa7.12□□□□□ -1.27
USP48-207ENST00000471752 PRR14Q9BWN1 585 aa7.12□□□□□ -1.27
USP48-207ENST00000471752 MEAF6Q9HAF1 191 aa7.12□□□□□ -1.27
USP48-207ENST00000471752 GLRX2Q9NS18 164 aa7.12□□□□□ -1.27
USP48-207ENST00000471752 PAQR5Q9NXK6 330 aaPredicted RBP7.12□□□□□ -1.27
USP48-207ENST00000471752 OSGIN1Q9UJX0 560 aa7.12□□□□□ -1.27
USP48-207ENST00000471752 LIPT1Q9Y234 373 aa7.12□□□□□ -1.27
USP48-207ENST00000471752 RTTNQ86VV8 2226 aa7.12□□□□□ -1.27
USP48-207ENST00000471752 UQCRHLA0A096LP55 91 aa7.11□□□□□ -1.27
USP48-207ENST00000471752 FRS3O43559 492 aa7.11□□□□□ -1.27
USP48-207ENST00000471752 SNNO75324 88 aaPredicted RBP7.11□□□□□ -1.27
USP48-207ENST00000471752 RAD51DO75771 328 aa7.11□□□□□ -1.27
USP48-207ENST00000471752 LY6HO94772 140 aa7.11□□□□□ -1.27
USP48-207ENST00000471752 PGM3O95394 542 aa7.11□□□□□ -1.27
USP48-207ENST00000471752 ITGA5P08648 1049 aa7.11□□□□□ -1.27
USP48-207ENST00000471752 MYZAPP0CAP1 466 aa7.11□□□□□ -1.27
USP48-207ENST00000471752 PPP3CBP16298 524 aa7.11□□□□□ -1.27
USP48-207ENST00000471752 LBPP18428 481 aa7.11□□□□□ -1.27
USP48-207ENST00000471752 IL32P24001 234 aa7.11□□□□□ -1.27
USP48-207ENST00000471752 ACAA2P42765 397 aaKnown RBP7.11□□□□□ -1.27
USP48-207ENST00000471752 ZNF83P51522 516 aa7.11□□□□□ -1.27
USP48-207ENST00000471752 SUMO3P55854 103 aaPredicted RBP7.11□□□□□ -1.27
USP48-207ENST00000471752 OR2B6P58173 313 aa7.11□□□□□ -1.27
USP48-207ENST00000471752 SELENBP1Q13228 472 aa7.11□□□□□ -1.27
USP48-207ENST00000471752 P2RY6Q15077 328 aa7.11□□□□□ -1.27
USP48-207ENST00000471752 CLEC12BQ2HXU8 276 aa7.11□□□□□ -1.27
USP48-207ENST00000471752 GPAT3Q53EU6 434 aa7.11□□□□□ -1.27
USP48-207ENST00000471752 SYT14P1Q58G82 188 aa7.11□□□□□ -1.27
USP48-207ENST00000471752 RPS26P11Q5JNZ5 115 aaPredicted RBP7.11□□□□□ -1.27
USP48-207ENST00000471752 GTF2IRD2BQ6EKJ0 949 aa7.11□□□□□ -1.27
USP48-207ENST00000471752 ABLIM2Q6H8Q1 611 aa7.11□□□□□ -1.27
USP48-207ENST00000471752 DNAJC14Q6Y2X3 702 aaPredicted RBP7.11□□□□□ -1.27
USP48-207ENST00000471752 ZNF621Q6ZSS3 439 aa7.11□□□□□ -1.27
USP48-207ENST00000471752 Q6ZT83 130 aa7.11□□□□□ -1.27
USP48-207ENST00000471752 GALNT5Q7Z7M9 940 aa7.11□□□□□ -1.27
USP48-207ENST00000471752 MTDHQ86UE4 582 aaKnown RBP7.11□□□□□ -1.27
USP48-207ENST00000471752 GTF2IRD2Q86UP8 949 aa7.11□□□□□ -1.27
USP48-207ENST00000471752 STK32CQ86UX6 486 aa7.11□□□□□ -1.27
USP48-207ENST00000471752 COMTD1Q86VU5 262 aa7.11□□□□□ -1.27
USP48-207ENST00000471752 WDFY1Q8IWB7 410 aa7.11□□□□□ -1.27
USP48-207ENST00000471752 ZNF100Q8IYN0 542 aa7.11□□□□□ -1.27
USP48-207ENST00000471752 OR52N5Q8NH56 324 aa7.11□□□□□ -1.27
USP48-207ENST00000471752 TMEM171Q8WVE6 324 aa7.11□□□□□ -1.27
USP48-207ENST00000471752 HSD17B8Q92506 261 aa7.11□□□□□ -1.27
USP48-207ENST00000471752 KISS1RQ969F8 398 aaPredicted RBP7.11□□□□□ -1.27
USP48-207ENST00000471752 GTPBP3Q969Y2 492 aaKnown RBP7.11□□□□□ -1.27
USP48-207ENST00000471752 TESCQ96BS2 214 aa7.11□□□□□ -1.27
USP48-207ENST00000471752 MOAP1Q96BY2 351 aa7.11□□□□□ -1.27
USP48-207ENST00000471752 WFDC6Q9BQY6 131 aa7.11□□□□□ -1.27
USP48-207ENST00000471752 SLCO5A1Q9H2Y9 848 aa7.11□□□□□ -1.27
USP48-207ENST00000471752 TIGARQ9NQ88 270 aa7.11□□□□□ -1.27
USP48-207ENST00000471752 AIG1Q9NVV5 245 aa7.11□□□□□ -1.27
USP48-207ENST00000471752 STOML1Q9UBI4 398 aa7.11□□□□□ -1.27
USP48-207ENST00000471752 RAB21Q9UL25 225 aa7.11□□□□□ -1.27
USP48-207ENST00000471752 B3GALT5Q9Y2C3 310 aa7.11□□□□□ -1.27
USP48-207ENST00000471752 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.11□□□□□ -1.27
USP48-207ENST00000471752 WDR45Q9Y484 360 aa7.11□□□□□ -1.27
USP48-207ENST00000471752 RNF115Q9Y4L5 304 aa7.11□□□□□ -1.27
USP48-207ENST00000471752 TENM1Q9UKZ4 2725 aa7.11□□□□□ -1.27
USP48-207ENST00000471752 IGKV3D-15A0A087WSY6 115 aa7.1□□□□□ -1.27
USP48-207ENST00000471752 TMED7-TICAM2A0A0A6YYA0 188 aa7.1□□□□□ -1.27
USP48-207ENST00000471752 AGAP5A6NIR3 686 aa7.1□□□□□ -1.27
USP48-207ENST00000471752 DUXAA6NLW8 204 aa7.1□□□□□ -1.27
USP48-207ENST00000471752 ZNF724A8MTY0 619 aa7.1□□□□□ -1.27
USP48-207ENST00000471752 PDLIM1O00151 329 aa7.1□□□□□ -1.27
USP48-207ENST00000471752 ABCD4O14678 606 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms