RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 NTNG2Q96CW9 530 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 NSMCE2Q96MF7 247 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 SIGLEC12Q96PQ1 595 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 SEPHS2Q99611 448 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 SH3GL3Q99963 347 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 ARPC5LQ9BPX5 153 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 SOX7Q9BT81 388 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 POLE3Q9NRF9 147 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 PLA2G3Q9NZ20 509 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 CALML5Q9NZT1 146 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 SCOCQ9UIL1 159 aa4.31□□□□□ -1.72
SF3B1-208ENST00000470268 MAGED1Q9Y5V3 778 aaPredicted RBP4.31□□□□□ -1.72
SF3B1-208ENST00000470268 ATMQ13315 3056 aa4.3□□□□□ -1.72
SF3B1-208ENST00000470268 CDHR4A6H8M9 788 aa4.3□□□□□ -1.72
SF3B1-208ENST00000470268 TMEM247A6NEH6 219 aa4.3□□□□□ -1.72
SF3B1-208ENST00000470268 SAC3D1A6NKF1 404 aa4.3□□□□□ -1.72
SF3B1-208ENST00000470268 AQP12BA6NM10 295 aa4.3□□□□□ -1.72
SF3B1-208ENST00000470268 G3V3Y1 287 aa4.3□□□□□ -1.72
SF3B1-208ENST00000470268 M0R3H8 397 aa4.3□□□□□ -1.72
SF3B1-208ENST00000470268 SOCS2O14508 198 aa4.3□□□□□ -1.72
SF3B1-208ENST00000470268 ZNF682O95780 498 aa4.3□□□□□ -1.72
SF3B1-208ENST00000470268 SEMG1P04279 462 aa4.3□□□□□ -1.72
SF3B1-208ENST00000470268 FESP07332 822 aa4.3□□□□□ -1.72
SF3B1-208ENST00000470268 PRG2P13727 222 aa4.3□□□□□ -1.72
SF3B1-208ENST00000470268 ACADSP16219 412 aa4.3□□□□□ -1.72
SF3B1-208ENST00000470268 IL7RP16871 459 aa4.3□□□□□ -1.72
SF3B1-208ENST00000470268 NAGAP17050 411 aa4.3□□□□□ -1.72
SF3B1-208ENST00000470268 TBXA2RP21731 343 aa4.3□□□□□ -1.72
SF3B1-208ENST00000470268 EVI2BP34910 448 aa4.3□□□□□ -1.72
SF3B1-208ENST00000470268 SSR4P51571 173 aa4.3□□□□□ -1.72
SF3B1-208ENST00000470268 SLC16A1P53985 500 aa4.3□□□□□ -1.72
SF3B1-208ENST00000470268 IST1P53990 364 aa4.3□□□□□ -1.72
SF3B1-208ENST00000470268 PSMD4P55036 377 aaKnown RBP4.3□□□□□ -1.72
SF3B1-208ENST00000470268 KCNJ10P78508 379 aa4.3□□□□□ -1.72
SF3B1-208ENST00000470268 HPCAP84074 193 aa4.3□□□□□ -1.72
SF3B1-208ENST00000470268 VLDLRP98155 873 aa4.3□□□□□ -1.72
SF3B1-208ENST00000470268 HOXC5Q00444 222 aa4.3□□□□□ -1.72
SF3B1-208ENST00000470268 RHDQ02161 417 aa4.3□□□□□ -1.72
SF3B1-208ENST00000470268 TUBA3CQ13748 450 aa4.3□□□□□ -1.72
SF3B1-208ENST00000470268 GNA13Q14344 377 aa4.3□□□□□ -1.72
SF3B1-208ENST00000470268 FGFBP1Q14512 234 aa4.3□□□□□ -1.72
SF3B1-208ENST00000470268 NPTX1Q15818 432 aa4.3□□□□□ -1.72
SF3B1-208ENST00000470268 ZNF311Q5JNZ3 666 aa4.3□□□□□ -1.72
SF3B1-208ENST00000470268 C6orf52Q5T4I8 152 aa4.3□□□□□ -1.72
SF3B1-208ENST00000470268 MRPL2Q5T653 305 aaKnown RBP4.3□□□□□ -1.72
SF3B1-208ENST00000470268 OGFRL1Q5TC84 451 aaPredicted RBP4.3□□□□□ -1.72
SF3B1-208ENST00000470268 ABHD17BQ5VST6 288 aa4.3□□□□□ -1.72
SF3B1-208ENST00000470268 PRAMEF20Q5VT98 475 aa4.3□□□□□ -1.72
SF3B1-208ENST00000470268 TUBA3EQ6PEY2 450 aa4.3□□□□□ -1.72
SF3B1-208ENST00000470268 OPN5Q6U736 354 aa4.3□□□□□ -1.72
SF3B1-208ENST00000470268 CBLN3Q6UW01 205 aa4.3□□□□□ -1.72
SF3B1-208ENST00000470268 ZNF836Q6ZNA1 936 aa4.3□□□□□ -1.72
SF3B1-208ENST00000470268 PATL1Q86TB9 770 aaKnown RBP4.3□□□□□ -1.72
SF3B1-208ENST00000470268 MARCH3Q86UD3 253 aa4.3□□□□□ -1.72
SF3B1-208ENST00000470268 ARMC8Q8IUR7 673 aa4.3□□□□□ -1.72
SF3B1-208ENST00000470268 EPHX4Q8IUS5 362 aa4.3□□□□□ -1.72
SF3B1-208ENST00000470268 SLC30A8Q8IWU4 369 aa4.3□□□□□ -1.72
SF3B1-208ENST00000470268 AQP12AQ8IXF9 295 aa4.3□□□□□ -1.72
SF3B1-208ENST00000470268 PEX5LQ8IYB4 626 aa4.3□□□□□ -1.72
SF3B1-208ENST00000470268 ADGRG5Q8IZF4 528 aa4.3□□□□□ -1.72
SF3B1-208ENST00000470268 TMEM156Q8N614 296 aa4.3□□□□□ -1.72
SF3B1-208ENST00000470268 SLC15A4Q8N697 577 aa4.3□□□□□ -1.72
SF3B1-208ENST00000470268 ZNF614Q8N883 585 aa4.3□□□□□ -1.72
SF3B1-208ENST00000470268 ICA1LQ8NDH6 482 aa4.3□□□□□ -1.72
SF3B1-208ENST00000470268 CATSPER1Q8NEC5 780 aa4.3□□□□□ -1.72
SF3B1-208ENST00000470268 SPPL2AQ8TCT8 520 aa4.3□□□□□ -1.72
SF3B1-208ENST00000470268 PAQR8Q8TEZ7 354 aa4.3□□□□□ -1.72
SF3B1-208ENST00000470268 CNOT9Q92600 299 aaKnown RBP4.3□□□□□ -1.72
SF3B1-208ENST00000470268 EXTL1Q92935 676 aa4.3□□□□□ -1.72
SF3B1-208ENST00000470268 TPD52L3Q96J77 140 aa4.3□□□□□ -1.72
SF3B1-208ENST00000470268 C7orf34Q96L11 122 aa4.3□□□□□ -1.72
SF3B1-208ENST00000470268 ZNF354BQ96LW1 612 aa4.3□□□□□ -1.72
SF3B1-208ENST00000470268 CIB1Q99828 191 aa4.3□□□□□ -1.72
SF3B1-208ENST00000470268 HES7Q9BYE0 225 aa4.3□□□□□ -1.72
SF3B1-208ENST00000470268 KLHL4Q9C0H6 718 aa4.3□□□□□ -1.72
SF3B1-208ENST00000470268 MUC13Q9H3R2 512 aa4.3□□□□□ -1.72
SF3B1-208ENST00000470268 COQ10BQ9H8M1 238 aa4.3□□□□□ -1.72
SF3B1-208ENST00000470268 TRIM45Q9H8W5 580 aaPredicted RBP4.3□□□□□ -1.72
SF3B1-208ENST00000470268 UBQLN4Q9NRR5 601 aa4.3□□□□□ -1.72
SF3B1-208ENST00000470268 DEPPQ9NTK1 212 aa4.3□□□□□ -1.72
SF3B1-208ENST00000470268 OLAHQ9NV23 265 aa4.3□□□□□ -1.72
SF3B1-208ENST00000470268 UBAP1Q9NZ09 502 aa4.3□□□□□ -1.72
SF3B1-208ENST00000470268 SEC14L3Q9UDX4 400 aa4.3□□□□□ -1.72
SF3B1-208ENST00000470268 CNOT11Q9UKZ1 510 aaKnown RBP4.3□□□□□ -1.72
SF3B1-208ENST00000470268 ZNF443Q9Y2A4 671 aaPredicted RBP4.3□□□□□ -1.72
SF3B1-208ENST00000470268 SH3GLB1Q9Y371 365 aa4.3□□□□□ -1.72
SF3B1-208ENST00000470268 AP4S1Q9Y587 144 aa4.3□□□□□ -1.72
SF3B1-208ENST00000470268 BOD1L1Q8NFC6 3051 aa4.3□□□□□ -1.72
SF3B1-208ENST00000470268 A0A0G2JMM0 328 aa4.29□□□□□ -1.72
SF3B1-208ENST00000470268 A0A1W2PPB8 328 aa4.29□□□□□ -1.72
SF3B1-208ENST00000470268 A0A1W2PRS3 328 aa4.29□□□□□ -1.72
SF3B1-208ENST00000470268 DHRS12A0PJE2 317 aa4.29□□□□□ -1.72
SF3B1-208ENST00000470268 PINLYPA6NC86 204 aa4.29□□□□□ -1.72
SF3B1-208ENST00000470268 SERINC4A6NH21 518 aa4.29□□□□□ -1.72
SF3B1-208ENST00000470268 KIR3DP1A8MWS1 328 aa4.29□□□□□ -1.72
SF3B1-208ENST00000470268 J3KTA2 159 aa4.29□□□□□ -1.72
SF3B1-208ENST00000470268 CASQ2O14958 399 aaPredicted RBP4.29□□□□□ -1.72
SF3B1-208ENST00000470268 SUV39H1O43463 412 aa4.29□□□□□ -1.72
SF3B1-208ENST00000470268 SCO2O43819 266 aa4.29□□□□□ -1.72
SF3B1-208ENST00000470268 PEX1O43933 1283 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms