RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, human

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COMMD3-208	ENST00000470045	GABRG1	Q8N1C3	465 aa		12.51	□□□□□ -0.41
COMMD3-208	ENST00000470045	GOLGA6L1	Q8N7Z2	621 aa		12.51	□□□□□ -0.41
COMMD3-208	ENST00000470045	SLC38A5	Q8WUX1	472 aa		12.51	□□□□□ -0.41
COMMD3-208	ENST00000470045	DYDC1	Q8WWB3	177 aa		12.51	□□□□□ -0.41
COMMD3-208	ENST00000470045	MAGEB18	Q96M61	343 aa		12.51	□□□□□ -0.41
COMMD3-208	ENST00000470045	ALPK1	Q96QP1	1244 aa		12.51	□□□□□ -0.41
COMMD3-208	ENST00000470045	KLHL4	Q9C0H6	718 aa		12.51	□□□□□ -0.41
COMMD3-208	ENST00000470045	C12orf49	Q9H741	205 aa		12.51	□□□□□ -0.41
COMMD3-208	ENST00000470045	FANCF	Q9NPI8	374 aa		12.51	□□□□□ -0.41
COMMD3-208	ENST00000470045	SLC25A37	Q9NYZ2	338 aa		12.51	□□□□□ -0.41
COMMD3-208	ENST00000470045	C6orf203	Q9P0P8	240 aa	Predicted RBP	12.51	□□□□□ -0.41
COMMD3-208	ENST00000470045	KLHL9	Q9P2J3	617 aa		12.51	□□□□□ -0.41
COMMD3-208	ENST00000470045	PRDM4	Q9UKN5	801 aa		12.51	□□□□□ -0.41
COMMD3-208	ENST00000470045	PCDHB14	Q9Y5E9	798 aa		12.51	□□□□□ -0.41
COMMD3-208	ENST00000470045	TRBV5-3	A0A0A0MS03	114 aa		12.5	□□□□□ -0.41
COMMD3-208	ENST00000470045	IGHV3-15	A0A0B4J1V0	119 aa		12.5	□□□□□ -0.41
COMMD3-208	ENST00000470045	DNPH1	O43598	174 aa		12.5	□□□□□ -0.41
COMMD3-208	ENST00000470045	PMS2P2	O95744	297 aa		12.5	□□□□□ -0.41
COMMD3-208	ENST00000470045	FES	P07332	822 aa		12.5	□□□□□ -0.41
COMMD3-208	ENST00000470045	THBS1	P07996	1170 aa		12.5	□□□□□ -0.41
COMMD3-208	ENST00000470045	HTR3A	P46098	478 aa		12.5	□□□□□ -0.41
COMMD3-208	ENST00000470045	IDH2	P48735	452 aa	Known RBP	12.5	□□□□□ -0.41
COMMD3-208	ENST00000470045	CSNK2A1	P68400	391 aa	Predicted RBP	12.5	□□□□□ -0.41
COMMD3-208	ENST00000470045	EPS8	Q12929	822 aa		12.5	□□□□□ -0.41
COMMD3-208	ENST00000470045	FADD	Q13158	208 aa		12.5	□□□□□ -0.41
COMMD3-208	ENST00000470045	LIN52	Q52LA3	116 aa		12.5	□□□□□ -0.41
COMMD3-208	ENST00000470045	RNF220	Q5VTB9	566 aa		12.5	□□□□□ -0.41
COMMD3-208	ENST00000470045	PRAMEF8	Q5VWM4	474 aa		12.5	□□□□□ -0.41
COMMD3-208	ENST00000470045	PRAMEF7	Q5VXH5	474 aa		12.5	□□□□□ -0.41
COMMD3-208	ENST00000470045	ZNF836	Q6ZNA1	936 aa		12.5	□□□□□ -0.41
COMMD3-208	ENST00000470045	VRK2	Q86Y07	508 aa		12.5	□□□□□ -0.41
COMMD3-208	ENST00000470045	MSRB3	Q8IXL7	192 aa		12.5	□□□□□ -0.41
COMMD3-208	ENST00000470045	ZNF440	Q8IYI8	595 aa		12.5	□□□□□ -0.41
COMMD3-208	ENST00000470045	OR52P1P	Q8NH57	321 aa		12.5	□□□□□ -0.41
COMMD3-208	ENST00000470045	SPDL1	Q96EA4	605 aa		12.5	□□□□□ -0.41
COMMD3-208	ENST00000470045	TMEM19	Q96HH6	336 aa		12.5	□□□□□ -0.41
COMMD3-208	ENST00000470045	ARL5B	Q96KC2	179 aa		12.5	□□□□□ -0.41
COMMD3-208	ENST00000470045	A4GALT	Q9NPC4	353 aa		12.5	□□□□□ -0.41
COMMD3-208	ENST00000470045	GPR52	Q9Y2T5	361 aa		12.5	□□□□□ -0.41
COMMD3-208	ENST00000470045	HDGFL3	Q9Y3E1	203 aa		12.5	□□□□□ -0.41
COMMD3-208	ENST00000470045	IGKV3D-15	A0A087WSY6	115 aa		12.49	□□□□□ -0.41
COMMD3-208	ENST00000470045		A0A0G2JPF8	293 aa		12.49	□□□□□ -0.41
COMMD3-208	ENST00000470045	CFAP73	A6NFT4	308 aa		12.49	□□□□□ -0.41
COMMD3-208	ENST00000470045	ZNF724	A8MTY0	619 aa		12.49	□□□□□ -0.41
COMMD3-208	ENST00000470045	HNRNPCL2	B2RXH8	293 aa		12.49	□□□□□ -0.41
COMMD3-208	ENST00000470045	HNRNPCL3	B7ZW38	293 aa		12.49	□□□□□ -0.41
COMMD3-208	ENST00000470045	SULT2B1	O00204	365 aa		12.49	□□□□□ -0.41
COMMD3-208	ENST00000470045	CLIC1	O00299	241 aa		12.49	□□□□□ -0.41
COMMD3-208	ENST00000470045	NR5A2	O00482	541 aa		12.49	□□□□□ -0.41
COMMD3-208	ENST00000470045	ZNF208	O43345	1280 aa		12.49	□□□□□ -0.41
COMMD3-208	ENST00000470045	HNRNPCL1	O60812	293 aa	Known RBP	12.49	□□□□□ -0.41
COMMD3-208	ENST00000470045	HNRNPCL4	P0DMR1	293 aa		12.49	□□□□□ -0.41
COMMD3-208	ENST00000470045	SLC1A3	P43003	542 aa		12.49	□□□□□ -0.41
COMMD3-208	ENST00000470045	OR3A2	P47893	321 aa		12.49	□□□□□ -0.41
COMMD3-208	ENST00000470045	POLR2H	P52434	150 aa	Known RBP	12.49	□□□□□ -0.41
COMMD3-208	ENST00000470045	MAP2K6	P52564	334 aa		12.49	□□□□□ -0.41
COMMD3-208	ENST00000470045	RASGEF1B	Q0VAM2	473 aa		12.49	□□□□□ -0.41
COMMD3-208	ENST00000470045	PDK3	Q15120	406 aa		12.49	□□□□□ -0.41
COMMD3-208	ENST00000470045	ZSWIM7	Q19AV6	140 aa		12.49	□□□□□ -0.41
COMMD3-208	ENST00000470045	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	12.49	□□□□□ -0.41
COMMD3-208	ENST00000470045	ANKRD34A	Q69YU3	496 aa		12.49	□□□□□ -0.41
COMMD3-208	ENST00000470045	ZNF300	Q96RE9	604 aa	Predicted RBP	12.49	□□□□□ -0.41
COMMD3-208	ENST00000470045	OR11A1	Q9GZK7	315 aa		12.49	□□□□□ -0.41
COMMD3-208	ENST00000470045	RAD21L1	Q9H4I0	556 aa		12.49	□□□□□ -0.41
COMMD3-208	ENST00000470045	ZNF385D	Q9H6B1	395 aa		12.49	□□□□□ -0.41
COMMD3-208	ENST00000470045	BCL2L10	Q9HD36	194 aa		12.49	□□□□□ -0.41
COMMD3-208	ENST00000470045	RLIM	Q9NVW2	624 aa		12.49	□□□□□ -0.41
COMMD3-208	ENST00000470045	CCDC167	Q9P0B6	97 aa		12.49	□□□□□ -0.41
COMMD3-208	ENST00000470045	OSGIN1	Q9UJX0	560 aa		12.49	□□□□□ -0.41
COMMD3-208	ENST00000470045	ZNF443	Q9Y2A4	671 aa	Predicted RBP	12.49	□□□□□ -0.41
COMMD3-208	ENST00000470045	CHST2	Q9Y4C5	530 aa		12.49	□□□□□ -0.41
COMMD3-208	ENST00000470045	PRR14L	Q5THK1	2151 aa		12.49	□□□□□ -0.41
COMMD3-208	ENST00000470045	TMED7-TICAM2	A0A0A6YYA0	188 aa		12.48	□□□□□ -0.41
COMMD3-208	ENST00000470045	ZNF716	A6NP11	495 aa		12.48	□□□□□ -0.41
COMMD3-208	ENST00000470045	ZNF814	B7Z6K7	855 aa		12.48	□□□□□ -0.41
COMMD3-208	ENST00000470045	KLF4	O43474	513 aa		12.48	□□□□□ -0.41
COMMD3-208	ENST00000470045	EDF1	O60869	148 aa	Known RBP	12.48	□□□□□ -0.41
COMMD3-208	ENST00000470045	TFPI	P10646	304 aa		12.48	□□□□□ -0.41
COMMD3-208	ENST00000470045	UQCRB	P14927	111 aa		12.48	□□□□□ -0.41
COMMD3-208	ENST00000470045	CD53	P19397	219 aa		12.48	□□□□□ -0.41
COMMD3-208	ENST00000470045	TACR3	P29371	465 aa		12.48	□□□□□ -0.41
COMMD3-208	ENST00000470045	ACAA2	P42765	397 aa	Known RBP	12.48	□□□□□ -0.41
COMMD3-208	ENST00000470045	SQLE	Q14534	574 aa		12.48	□□□□□ -0.41
COMMD3-208	ENST00000470045	PAGE3	Q5JUK9	113 aa		12.48	□□□□□ -0.41
COMMD3-208	ENST00000470045	MTDH	Q86UE4	582 aa	Known RBP	12.48	□□□□□ -0.41
COMMD3-208	ENST00000470045	CXorf67	Q86X51	503 aa	Predicted RBP	12.48	□□□□□ -0.41
COMMD3-208	ENST00000470045	PIK3IP1	Q96FE7	263 aa		12.48	□□□□□ -0.41
COMMD3-208	ENST00000470045	ZC3HAV1L	Q96H79	300 aa	Known RBP	12.48	□□□□□ -0.41
COMMD3-208	ENST00000470045	SPATA9	Q9BWV2	254 aa		12.48	□□□□□ -0.41
COMMD3-208	ENST00000470045	ACTR6	Q9GZN1	396 aa		12.48	□□□□□ -0.41
COMMD3-208	ENST00000470045	ADAM19	Q9H013	955 aa		12.48	□□□□□ -0.41
COMMD3-208	ENST00000470045	VAPA	Q9P0L0	249 aa		12.48	□□□□□ -0.41
COMMD3-208	ENST00000470045	SLAMF8	Q9P0V8	285 aa		12.48	□□□□□ -0.41
COMMD3-208	ENST00000470045	TRAPPC4	Q9Y296	219 aa		12.48	□□□□□ -0.41
COMMD3-208	ENST00000470045	TMED7	Q9Y3B3	224 aa		12.48	□□□□□ -0.41
COMMD3-208	ENST00000470045	MAP1A	P78559	2803 aa	Predicted RBP	12.47	□□□□□ -0.41
COMMD3-208	ENST00000470045	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	12.47	□□□□□ -0.41
COMMD3-208	ENST00000470045	TMEM72	A0PK05	275 aa		12.47	□□□□□ -0.41
COMMD3-208	ENST00000470045	TMEM247	A6NEH6	219 aa		12.47	□□□□□ -0.41
COMMD3-208	ENST00000470045	PPIB	P23284	216 aa	Known RBP	12.47	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms