RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 GXYLT1Q4G148 440 aa13.31□□□□□ -0.28
COL9A3-209ENST00000469852 GDF7Q7Z4P5 450 aa13.31□□□□□ -0.28
COL9A3-209ENST00000469852 CD163Q86VB7 1156 aa13.31□□□□□ -0.28
COL9A3-209ENST00000469852 SPATA24Q86W54 205 aa13.31□□□□□ -0.28
COL9A3-209ENST00000469852 P3H2Q8IVL5 708 aa13.31□□□□□ -0.28
COL9A3-209ENST00000469852 FAM57AQ8TBR7 257 aa13.31□□□□□ -0.28
COL9A3-209ENST00000469852 SARAFQ96BY9 339 aa13.31□□□□□ -0.28
COL9A3-209ENST00000469852 ADGRG7Q96K78 797 aa13.31□□□□□ -0.28
COL9A3-209ENST00000469852 LRGUKQ96M69 825 aa13.31□□□□□ -0.28
COL9A3-209ENST00000469852 PRSS27Q9BQR3 290 aa13.31□□□□□ -0.28
COL9A3-209ENST00000469852 PRDM14Q9GZV8 571 aa13.31□□□□□ -0.28
COL9A3-209ENST00000469852 COQ10BQ9H8M1 238 aa13.31□□□□□ -0.28
COL9A3-209ENST00000469852 TMEM27Q9HBJ8 222 aa13.31□□□□□ -0.28
COL9A3-209ENST00000469852 NDUFAF4Q9P032 175 aa13.31□□□□□ -0.28
COL9A3-209ENST00000469852 RPS6KB2Q9UBS0 482 aa13.31□□□□□ -0.28
COL9A3-209ENST00000469852 CHRNA9Q9UGM1 479 aa13.31□□□□□ -0.28
COL9A3-209ENST00000469852 ACAD8Q9UKU7 415 aa13.31□□□□□ -0.28
COL9A3-209ENST00000469852 SLC7A7Q9UM01 511 aa13.31□□□□□ -0.28
COL9A3-209ENST00000469852 CAMK2AQ9UQM7 478 aa13.31□□□□□ -0.28
COL9A3-209ENST00000469852 ENPP4Q9Y6X5 453 aa13.31□□□□□ -0.28
COL9A3-209ENST00000469852 RP1L1Q8IWN7 2480 aaPredicted RBP13.31□□□□□ -0.28
COL9A3-209ENST00000469852 IGKV1D-42A0A075B6H8 117 aa13.3□□□□□ -0.28
COL9A3-209ENST00000469852 A0A1W2PNR3 127 aa13.3□□□□□ -0.28
COL9A3-209ENST00000469852 TCRBV3S1A0A5B6 114 aa13.3□□□□□ -0.28
COL9A3-209ENST00000469852 TRAPPC13A5PLN9 417 aa13.3□□□□□ -0.28
COL9A3-209ENST00000469852 OR14I1A6ND48 311 aa13.3□□□□□ -0.28
COL9A3-209ENST00000469852 AQP12BA6NM10 295 aa13.3□□□□□ -0.28
COL9A3-209ENST00000469852 TPOP07202 933 aa13.3□□□□□ -0.28
COL9A3-209ENST00000469852 NQO1P15559 274 aaKnown RBP13.3□□□□□ -0.28
COL9A3-209ENST00000469852 GNLYP22749 145 aa13.3□□□□□ -0.28
COL9A3-209ENST00000469852 HTR3AP46098 478 aa13.3□□□□□ -0.28
COL9A3-209ENST00000469852 TMEM176BQ3YBM2 270 aaPredicted RBP13.3□□□□□ -0.28
COL9A3-209ENST00000469852 ALG10BQ5I7T1 473 aa13.3□□□□□ -0.28
COL9A3-209ENST00000469852 C1orf146Q5VVC0 180 aa13.3□□□□□ -0.28
COL9A3-209ENST00000469852 C1QL3Q5VWW1 255 aa13.3□□□□□ -0.28
COL9A3-209ENST00000469852 C3orf33Q6P1S2 294 aa13.3□□□□□ -0.28
COL9A3-209ENST00000469852 ZNF613Q6PF04 617 aa13.3□□□□□ -0.28
COL9A3-209ENST00000469852 ULK3Q6PHR2 472 aa13.3□□□□□ -0.28
COL9A3-209ENST00000469852 C3P1Q6ZMU1 363 aa13.3□□□□□ -0.28
COL9A3-209ENST00000469852 Q6ZPB1 254 aaPredicted RBP13.3□□□□□ -0.28
COL9A3-209ENST00000469852 DOLPP1Q86YN1 238 aa13.3□□□□□ -0.28
COL9A3-209ENST00000469852 NKAIN4Q8IVV8 208 aa13.3□□□□□ -0.28
COL9A3-209ENST00000469852 AQP12AQ8IXF9 295 aa13.3□□□□□ -0.28
COL9A3-209ENST00000469852 RPRMLQ8N4K4 120 aa13.3□□□□□ -0.28
COL9A3-209ENST00000469852 GALNT11Q8NCW6 608 aa13.3□□□□□ -0.28
COL9A3-209ENST00000469852 CANT1Q8WVQ1 401 aa13.3□□□□□ -0.28
COL9A3-209ENST00000469852 SLC38A4Q969I6 547 aa13.3□□□□□ -0.28
COL9A3-209ENST00000469852 SLC41A3Q96GZ6 507 aa13.3□□□□□ -0.28
COL9A3-209ENST00000469852 ARL5BQ96KC2 179 aa13.3□□□□□ -0.28
COL9A3-209ENST00000469852 PRRC1Q96M27 445 aa13.3□□□□□ -0.28
COL9A3-209ENST00000469852 TRIM15Q9C019 465 aa13.3□□□□□ -0.28
COL9A3-209ENST00000469852 MAN2C1Q9NTJ4 1040 aa13.3□□□□□ -0.28
COL9A3-209ENST00000469852 SH3BGRL2Q9UJC5 107 aa13.3□□□□□ -0.28
COL9A3-209ENST00000469852 RIMS3Q9UJD0 308 aa13.3□□□□□ -0.28
COL9A3-209ENST00000469852 TINAGQ9UJW2 476 aa13.3□□□□□ -0.28
COL9A3-209ENST00000469852 AP4B1Q9Y6B7 739 aa13.3□□□□□ -0.28
COL9A3-209ENST00000469852 POLEQ07864 2286 aa13.29□□□□□ -0.28
COL9A3-209ENST00000469852 LINC01387J3KSC0 135 aa13.29□□□□□ -0.28
COL9A3-209ENST00000469852 EIF1AYO14602 144 aaKnown RBP13.29□□□□□ -0.28
COL9A3-209ENST00000469852 TNFSF11O14788 317 aa13.29□□□□□ -0.28
COL9A3-209ENST00000469852 BCKDKO14874 412 aa13.29□□□□□ -0.28
COL9A3-209ENST00000469852 OR5F1O95221 314 aa13.29□□□□□ -0.28
COL9A3-209ENST00000469852 STAMBPO95630 424 aa13.29□□□□□ -0.28
COL9A3-209ENST00000469852 CPN1P15169 458 aa13.29□□□□□ -0.28
COL9A3-209ENST00000469852 CXCR1P25024 350 aa13.29□□□□□ -0.28
COL9A3-209ENST00000469852 GCKP35557 465 aa13.29□□□□□ -0.28
COL9A3-209ENST00000469852 MAGEA2P43356 314 aa13.29□□□□□ -0.28
COL9A3-209ENST00000469852 TAS2R41P59536 307 aa13.29□□□□□ -0.28
COL9A3-209ENST00000469852 EGR4Q05215 589 aa13.29□□□□□ -0.28
COL9A3-209ENST00000469852 SYT14P1Q58G82 188 aa13.29□□□□□ -0.28
COL9A3-209ENST00000469852 ZNF585AQ6P3V2 769 aa13.29□□□□□ -0.28
COL9A3-209ENST00000469852 LINC00114Q6XXX2 140 aa13.29□□□□□ -0.28
COL9A3-209ENST00000469852 NCCRP1Q6ZVX7 275 aaPredicted RBP13.29□□□□□ -0.28
COL9A3-209ENST00000469852 ZDHHC21Q8IVQ6 265 aa13.29□□□□□ -0.28
COL9A3-209ENST00000469852 RNF217Q8TC41 542 aa13.29□□□□□ -0.28
COL9A3-209ENST00000469852 DNAJA4Q8WW22 397 aaPredicted RBP13.29□□□□□ -0.28
COL9A3-209ENST00000469852 SLCO4A1Q96BD0 722 aa13.29□□□□□ -0.28
COL9A3-209ENST00000469852 ZNF845Q96IR2 970 aaPredicted RBP13.29□□□□□ -0.28
COL9A3-209ENST00000469852 KLHL15Q96M94 604 aa13.29□□□□□ -0.28
COL9A3-209ENST00000469852 ZNF300Q96RE9 604 aaPredicted RBP13.29□□□□□ -0.28
COL9A3-209ENST00000469852 TUBA1CQ9BQE3 449 aa13.29□□□□□ -0.28
COL9A3-209ENST00000469852 OSGIN2Q9Y236 505 aa13.29□□□□□ -0.28
COL9A3-209ENST00000469852 NAV2Q8IVL1 2488 aa13.29□□□□□ -0.28
COL9A3-209ENST00000469852 A0A087WUJ7 227 aa13.28□□□□□ -0.28
COL9A3-209ENST00000469852 DHRS12A0PJE2 317 aa13.28□□□□□ -0.28
COL9A3-209ENST00000469852 ELOA3DA6NLF2 546 aaPredicted RBP13.28□□□□□ -0.28
COL9A3-209ENST00000469852 H0Y3Z8 333 aa13.28□□□□□ -0.28
COL9A3-209ENST00000469852 CHP2O43745 196 aa13.28□□□□□ -0.28
COL9A3-209ENST00000469852 NPIPB7O75200 414 aa13.28□□□□□ -0.28
COL9A3-209ENST00000469852 CIB2O75838 187 aa13.28□□□□□ -0.28
COL9A3-209ENST00000469852 FABP3P05413 133 aa13.28□□□□□ -0.28
COL9A3-209ENST00000469852 TFPIP10646 304 aa13.28□□□□□ -0.28
COL9A3-209ENST00000469852 IMPDH2P12268 514 aa13.28□□□□□ -0.28
COL9A3-209ENST00000469852 KLK2P20151 261 aa13.28□□□□□ -0.28
COL9A3-209ENST00000469852 LSM11P83369 360 aaKnown RBP eCLIP13.28□□□□□ -0.28
COL9A3-209ENST00000469852 KPNB1Q14974 876 aaKnown RBP13.28□□□□□ -0.28
COL9A3-209ENST00000469852 BCL2A1Q16548 175 aa13.28□□□□□ -0.28
COL9A3-209ENST00000469852 EIF2S3LQ2VIR3 472 aaKnown RBP13.28□□□□□ -0.28
COL9A3-209ENST00000469852 ELOA3BQ3SY89 546 aa13.28□□□□□ -0.28
COL9A3-209ENST00000469852 WLSQ5T9L3 541 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms