RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 CNIH4Q9P003 139 aa16.03■□□□□ 0.16
MRPL28-208ENST00000469744 BOKQ9UMX3 212 aaPredicted RBP16.03■□□□□ 0.16
MRPL28-208ENST00000469744 PHF3Q92576 2039 aaKnown RBP16.02■□□□□ 0.16
MRPL28-208ENST00000469744 MYO9AB2RTY4 2548 aa16.02■□□□□ 0.15
MRPL28-208ENST00000469744 C19orf84I3L1E1 186 aa16.02■□□□□ 0.15
MRPL28-208ENST00000469744 SLITRK5O94991 958 aa16.02■□□□□ 0.15
MRPL28-208ENST00000469744 IGHG3P01860 377 aa16.02■□□□□ 0.15
MRPL28-208ENST00000469744 ABCD3P28288 659 aa16.02■□□□□ 0.15
MRPL28-208ENST00000469744 TMBIM6P55061 237 aa16.02■□□□□ 0.15
MRPL28-208ENST00000469744 SLC10A1Q14973 349 aa16.02■□□□□ 0.15
MRPL28-208ENST00000469744 SYPL1Q16563 259 aa16.02■□□□□ 0.15
MRPL28-208ENST00000469744 HYAL4Q2M3T9 481 aa16.02■□□□□ 0.15
MRPL28-208ENST00000469744 GTF2IRD2BQ6EKJ0 949 aa16.02■□□□□ 0.15
MRPL28-208ENST00000469744 GTF2IRD2Q86UP8 949 aa16.02■□□□□ 0.15
MRPL28-208ENST00000469744 DEPDC4Q8N2C3 294 aa16.02■□□□□ 0.15
MRPL28-208ENST00000469744 LINC00471Q8N535 108 aa16.02■□□□□ 0.15
MRPL28-208ENST00000469744 NUP43Q8NFH3 380 aa16.02■□□□□ 0.15
MRPL28-208ENST00000469744 KAT2AQ92830 837 aa16.02■□□□□ 0.15
MRPL28-208ENST00000469744 COL21A1Q96P44 957 aa16.02■□□□□ 0.15
MRPL28-208ENST00000469744 ALPK1Q96QP1 1244 aa16.02■□□□□ 0.15
MRPL28-208ENST00000469744 TP63Q9H3D4 680 aaPredicted RBP16.02■□□□□ 0.15
MRPL28-208ENST00000469744 LDAHQ9H6V9 325 aa16.02■□□□□ 0.15
MRPL28-208ENST00000469744 EXO5Q9H790 373 aa16.02■□□□□ 0.15
MRPL28-208ENST00000469744 ZFP64Q9NPA5 681 aa16.02■□□□□ 0.15
MRPL28-208ENST00000469744 CREBBPQ92793 2442 aa16.02■□□□□ 0.15
MRPL28-208ENST00000469744 DUXAA6NLW8 204 aa16.01■□□□□ 0.15
MRPL28-208ENST00000469744 SYT5O00445 386 aa16.01■□□□□ 0.15
MRPL28-208ENST00000469744 FAAHO00519 579 aa16.01■□□□□ 0.15
MRPL28-208ENST00000469744 CLDN14O95500 239 aa16.01■□□□□ 0.15
MRPL28-208ENST00000469744 HMGN2P05204 90 aaKnown RBP16.01■□□□□ 0.15
MRPL28-208ENST00000469744 HTR1AP08908 422 aa16.01■□□□□ 0.15
MRPL28-208ENST00000469744 CYP4B1P13584 511 aa16.01■□□□□ 0.15
MRPL28-208ENST00000469744 AGAP20933 346 aa16.01■□□□□ 0.15
MRPL28-208ENST00000469744 ENDOUP21128 410 aaKnown RBP16.01■□□□□ 0.15
MRPL28-208ENST00000469744 MAN2A2P49641 1150 aa16.01■□□□□ 0.15
MRPL28-208ENST00000469744 NRG3P56975 720 aa16.01■□□□□ 0.15
MRPL28-208ENST00000469744 SLC35A2P78381 396 aa16.01■□□□□ 0.15
MRPL28-208ENST00000469744 MVKQ03426 396 aa16.01■□□□□ 0.15
MRPL28-208ENST00000469744 NEDD8Q15843 81 aa16.01■□□□□ 0.15
MRPL28-208ENST00000469744 GXYLT1Q4G148 440 aa16.01■□□□□ 0.15
MRPL28-208ENST00000469744 SLC44A2Q8IWA5 706 aaPredicted RBP16.01■□□□□ 0.15
MRPL28-208ENST00000469744 BPIFB6Q8NFQ5 453 aa16.01■□□□□ 0.15
MRPL28-208ENST00000469744 OR9A2Q8NGT5 310 aa16.01■□□□□ 0.15
MRPL28-208ENST00000469744 CNIH3Q8TBE1 160 aa16.01■□□□□ 0.15
MRPL28-208ENST00000469744 MUL1Q969V5 352 aa16.01■□□□□ 0.15
MRPL28-208ENST00000469744 CTHRC1Q96CG8 243 aa16.01■□□□□ 0.15
MRPL28-208ENST00000469744 TRNT1Q96Q11 434 aaKnown RBP16.01■□□□□ 0.15
MRPL28-208ENST00000469744 PINK1Q9BXM7 581 aa16.01■□□□□ 0.15
MRPL28-208ENST00000469744 ACTRT3Q9BYD9 372 aa16.01■□□□□ 0.15
MRPL28-208ENST00000469744 SLC6A15Q9H2J7 730 aa16.01■□□□□ 0.15
MRPL28-208ENST00000469744 TMCC3Q9ULS5 477 aa16.01■□□□□ 0.15
MRPL28-208ENST00000469744 MGAT4BQ9UQ53 548 aa16.01■□□□□ 0.15
MRPL28-208ENST00000469744 TACC2O95359 2948 aa16■□□□□ 0.15
MRPL28-208ENST00000469744 TRGV5A0A0B4J1U4 118 aa16■□□□□ 0.15
MRPL28-208ENST00000469744 J3KTA2 159 aa16■□□□□ 0.15
MRPL28-208ENST00000469744 TP53I11O14683 189 aa16■□□□□ 0.15
MRPL28-208ENST00000469744 NOL3O60936 208 aaKnown RBP16■□□□□ 0.15
MRPL28-208ENST00000469744 ADAP00813 363 aa16■□□□□ 0.15
MRPL28-208ENST00000469744 PCMT1P22061 227 aa16■□□□□ 0.15
MRPL28-208ENST00000469744 LASP1Q14847 261 aaKnown RBP16■□□□□ 0.15
MRPL28-208ENST00000469744 ZNF628Q5EBL2 1059 aa16■□□□□ 0.15
MRPL28-208ENST00000469744 ZNF770Q6IQ21 691 aaPredicted RBP16■□□□□ 0.15
MRPL28-208ENST00000469744 ZNF585AQ6P3V2 769 aa16■□□□□ 0.15
MRPL28-208ENST00000469744 TMEM107Q6UX40 140 aa16■□□□□ 0.15
MRPL28-208ENST00000469744 SVOPQ8N4V2 548 aa16■□□□□ 0.15
MRPL28-208ENST00000469744 OR5D16Q8NGK9 328 aa16■□□□□ 0.15
MRPL28-208ENST00000469744 C12orf43Q96C57 262 aaKnown RBP16■□□□□ 0.15
MRPL28-208ENST00000469744 OR7D2Q96RA2 312 aa16■□□□□ 0.15
MRPL28-208ENST00000469744 BCL7BQ9BQE9 202 aa16■□□□□ 0.15
MRPL28-208ENST00000469744 GIN1Q9NXP7 522 aa16■□□□□ 0.15
MRPL28-208ENST00000469744 SPRR3Q9UBC9 169 aa16■□□□□ 0.15
MRPL28-208ENST00000469744 SLC9A8Q9Y2E8 581 aa16■□□□□ 0.15
MRPL28-208ENST00000469744 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.99■□□□□ 0.15
MRPL28-208ENST00000469744 A0A1B0GVC2 190 aa15.99■□□□□ 0.15
MRPL28-208ENST00000469744 AQP7O14520 342 aa15.99■□□□□ 0.15
MRPL28-208ENST00000469744 FFAR1O14842 300 aa15.99■□□□□ 0.15
MRPL28-208ENST00000469744 TRIM3O75382 744 aaPredicted RBP15.99■□□□□ 0.15
MRPL28-208ENST00000469744 LGI1O95970 557 aa15.99■□□□□ 0.15
MRPL28-208ENST00000469744 H1F0P07305 194 aaKnown RBP15.99■□□□□ 0.15
MRPL28-208ENST00000469744 CHRM4P08173 479 aa15.99■□□□□ 0.15
MRPL28-208ENST00000469744 GDF1P27539 372 aa15.99■□□□□ 0.15
MRPL28-208ENST00000469744 EPHA2P29317 976 aa15.99■□□□□ 0.15
MRPL28-208ENST00000469744 TMED10P49755 219 aaKnown RBP15.99■□□□□ 0.15
MRPL28-208ENST00000469744 EMDP50402 254 aa15.99■□□□□ 0.15
MRPL28-208ENST00000469744 PRKAG1P54619 331 aa15.99■□□□□ 0.15
MRPL28-208ENST00000469744 PMPCAQ10713 525 aa15.99■□□□□ 0.15
MRPL28-208ENST00000469744 FUT5Q11128 374 aa15.99■□□□□ 0.15
MRPL28-208ENST00000469744 ATAD3BQ5T9A4 648 aa15.99■□□□□ 0.15
MRPL28-208ENST00000469744 HEPHL1Q6MZM0 1159 aa15.99■□□□□ 0.15
MRPL28-208ENST00000469744 CDC73Q6P1J9 531 aa15.99■□□□□ 0.15
MRPL28-208ENST00000469744 SZRD1Q7Z422 152 aa15.99■□□□□ 0.15
MRPL28-208ENST00000469744 CCDC71Q8IV32 467 aaPredicted RBP15.99■□□□□ 0.15
MRPL28-208ENST00000469744 MCEMP1Q8IX19 187 aa15.99■□□□□ 0.15
MRPL28-208ENST00000469744 ENTHD1Q8IYW4 607 aa15.99■□□□□ 0.15
MRPL28-208ENST00000469744 C17orf47Q8NEP4 570 aa15.99■□□□□ 0.15
MRPL28-208ENST00000469744 OR52J3Q8NH60 311 aa15.99■□□□□ 0.15
MRPL28-208ENST00000469744 CA5BP1Q8WTZ4 195 aa15.99■□□□□ 0.15
MRPL28-208ENST00000469744 GIMAP5Q96F15 307 aa15.99■□□□□ 0.15
MRPL28-208ENST00000469744 LCORQ96JN0 433 aaPredicted RBP15.99■□□□□ 0.15
MRPL28-208ENST00000469744 MS4A4EQ96PG1 132 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms