RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 THUMPD1Q9NXG2 353 aaKnown RBP10.27□□□□□ -0.77
CDHR3-205ENST00000468143 ZNF226Q9NYT6 803 aa10.27□□□□□ -0.77
CDHR3-205ENST00000468143 PRSS50Q9UI38 385 aa10.27□□□□□ -0.77
CDHR3-205ENST00000468143 ST6GALNAC2Q9UJ37 374 aa10.27□□□□□ -0.77
CDHR3-205ENST00000468143 SPIN1Q9Y657 262 aaPredicted RBP10.27□□□□□ -0.77
CDHR3-205ENST00000468143 ABCA12Q86UK0 2595 aa10.26□□□□□ -0.77
CDHR3-205ENST00000468143 ZC3H12DA2A288 527 aaKnown RBP10.26□□□□□ -0.77
CDHR3-205ENST00000468143 ZNF814B7Z6K7 855 aa10.26□□□□□ -0.77
CDHR3-205ENST00000468143 C5orf58C9J3I9 102 aa10.26□□□□□ -0.77
CDHR3-205ENST00000468143 FRS3O43559 492 aa10.26□□□□□ -0.77
CDHR3-205ENST00000468143 CYTIPO60759 359 aa10.26□□□□□ -0.77
CDHR3-205ENST00000468143 PGM3O95394 542 aa10.26□□□□□ -0.77
CDHR3-205ENST00000468143 ADAP00813 363 aa10.26□□□□□ -0.77
CDHR3-205ENST00000468143 THBDP07204 575 aa10.26□□□□□ -0.77
CDHR3-205ENST00000468143 IMPDH2P12268 514 aa10.26□□□□□ -0.77
CDHR3-205ENST00000468143 EDNRAP25101 427 aa10.26□□□□□ -0.77
CDHR3-205ENST00000468143 ACAA2P42765 397 aaKnown RBP10.26□□□□□ -0.77
CDHR3-205ENST00000468143 SLC1A3P43003 542 aa10.26□□□□□ -0.77
CDHR3-205ENST00000468143 HTR3AP46098 478 aa10.26□□□□□ -0.77
CDHR3-205ENST00000468143 PCYT1AP49585 367 aa10.26□□□□□ -0.77
CDHR3-205ENST00000468143 CSNK2A1P68400 391 aaPredicted RBP10.26□□□□□ -0.77
CDHR3-205ENST00000468143 BNIP2Q12982 314 aa10.26□□□□□ -0.77
CDHR3-205ENST00000468143 FADDQ13158 208 aa10.26□□□□□ -0.77
CDHR3-205ENST00000468143 TESK1Q15569 626 aa10.26□□□□□ -0.77
CDHR3-205ENST00000468143 GCNT6Q5T4J0 391 aa10.26□□□□□ -0.77
CDHR3-205ENST00000468143 DLEU7Q6UYE1 221 aa10.26□□□□□ -0.77
CDHR3-205ENST00000468143 TFAP2EQ6VUC0 442 aa10.26□□□□□ -0.77
CDHR3-205ENST00000468143 SERPINA11Q86U17 422 aa10.26□□□□□ -0.77
CDHR3-205ENST00000468143 MTDHQ86UE4 582 aaKnown RBP10.26□□□□□ -0.77
CDHR3-205ENST00000468143 CXorf67Q86X51 503 aaPredicted RBP10.26□□□□□ -0.77
CDHR3-205ENST00000468143 CCDC103Q8IW40 242 aa10.26□□□□□ -0.77
CDHR3-205ENST00000468143 ZNF440Q8IYI8 595 aa10.26□□□□□ -0.77
CDHR3-205ENST00000468143 SPATA9Q9BWV2 254 aa10.26□□□□□ -0.77
CDHR3-205ENST00000468143 TMEM120AQ9BXJ8 343 aa10.26□□□□□ -0.77
CDHR3-205ENST00000468143 RSPO3Q9BXY4 272 aaPredicted RBP10.26□□□□□ -0.77
CDHR3-205ENST00000468143 ACTR6Q9GZN1 396 aa10.26□□□□□ -0.77
CDHR3-205ENST00000468143 ADAM19Q9H013 955 aa10.26□□□□□ -0.77
CDHR3-205ENST00000468143 RABEP2Q9H5N1 569 aa10.26□□□□□ -0.77
CDHR3-205ENST00000468143 ZNF385DQ9H6B1 395 aa10.26□□□□□ -0.77
CDHR3-205ENST00000468143 CACYBPQ9HB71 228 aaKnown RBP10.26□□□□□ -0.77
CDHR3-205ENST00000468143 KLHL9Q9P2J3 617 aa10.26□□□□□ -0.77
CDHR3-205ENST00000468143 TRIM33Q9UPN9 1127 aa10.26□□□□□ -0.77
CDHR3-205ENST00000468143 IFT52Q9Y366 437 aa10.26□□□□□ -0.77
CDHR3-205ENST00000468143 NDUFAF1Q9Y375 327 aa10.26□□□□□ -0.77
CDHR3-205ENST00000468143 APCP25054 2843 aa10.26□□□□□ -0.77
CDHR3-205ENST00000468143 PDZD2O15018 2839 aa10.25□□□□□ -0.77
CDHR3-205ENST00000468143 TRBV5-3A0A0A0MS03 114 aa10.25□□□□□ -0.77
CDHR3-205ENST00000468143 DEFB108AA8MXU0 73 aa10.25□□□□□ -0.77
CDHR3-205ENST00000468143 FAAHO00519 579 aa10.25□□□□□ -0.77
CDHR3-205ENST00000468143 RAMP1O60894 148 aa10.25□□□□□ -0.77
CDHR3-205ENST00000468143 PMS2P2O95744 297 aa10.25□□□□□ -0.77
CDHR3-205ENST00000468143 THBS1P07996 1170 aa10.25□□□□□ -0.77
CDHR3-205ENST00000468143 VIMP08670 466 aaKnown RBP10.25□□□□□ -0.77
CDHR3-205ENST00000468143 BMP2P12643 396 aa10.25□□□□□ -0.77
CDHR3-205ENST00000468143 UQCRBP14927 111 aa10.25□□□□□ -0.77
CDHR3-205ENST00000468143 FPR1P21462 350 aa10.25□□□□□ -0.77
CDHR3-205ENST00000468143 CRYGSP22914 178 aa10.25□□□□□ -0.77
CDHR3-205ENST00000468143 DNASE1P24855 282 aa10.25□□□□□ -0.77
CDHR3-205ENST00000468143 CXCR1P25024 350 aa10.25□□□□□ -0.77
CDHR3-205ENST00000468143 COPZ1P61923 177 aa10.25□□□□□ -0.77
CDHR3-205ENST00000468143 IRX1P78414 480 aaPredicted RBP10.25□□□□□ -0.77
CDHR3-205ENST00000468143 CDK6Q00534 326 aa10.25□□□□□ -0.77
CDHR3-205ENST00000468143 GUCY1A3Q02108 690 aa10.25□□□□□ -0.77
CDHR3-205ENST00000468143 RUNDC3AQ59EK9 446 aa10.25□□□□□ -0.77
CDHR3-205ENST00000468143 RNF220Q5VTB9 566 aa10.25□□□□□ -0.77
CDHR3-205ENST00000468143 RETREG3Q86VR2 466 aa10.25□□□□□ -0.77
CDHR3-205ENST00000468143 WFDC8Q8IUA0 241 aa10.25□□□□□ -0.77
CDHR3-205ENST00000468143 BBS10Q8TAM1 723 aa10.25□□□□□ -0.77
CDHR3-205ENST00000468143 S100PBPQ96BU1 408 aa10.25□□□□□ -0.77
CDHR3-205ENST00000468143 DDIT4LQ96D03 193 aa10.25□□□□□ -0.77
CDHR3-205ENST00000468143 HS3ST6Q96QI5 342 aa10.25□□□□□ -0.77
CDHR3-205ENST00000468143 PRR14Q9BWN1 585 aa10.25□□□□□ -0.77
CDHR3-205ENST00000468143 BCO1Q9HAY6 547 aa10.25□□□□□ -0.77
CDHR3-205ENST00000468143 GP6Q9HCN6 339 aa10.25□□□□□ -0.77
CDHR3-205ENST00000468143 BCL2L10Q9HD36 194 aa10.25□□□□□ -0.77
CDHR3-205ENST00000468143 FANCFQ9NPI8 374 aa10.25□□□□□ -0.77
CDHR3-205ENST00000468143 FGFR1OP2Q9NVK5 253 aa10.25□□□□□ -0.77
CDHR3-205ENST00000468143 TMEM45AQ9NWC5 275 aa10.25□□□□□ -0.77
CDHR3-205ENST00000468143 TMEM181Q9P2C4 612 aa10.25□□□□□ -0.77
CDHR3-205ENST00000468143 LEF1Q9UJU2 399 aaPredicted RBP10.25□□□□□ -0.77
CDHR3-205ENST00000468143 GPR52Q9Y2T5 361 aa10.25□□□□□ -0.77
CDHR3-205ENST00000468143 HDGFL3Q9Y3E1 203 aa10.25□□□□□ -0.77
CDHR3-205ENST00000468143 CSMD1Q96PZ7 3565 aa10.25□□□□□ -0.77
CDHR3-205ENST00000468143 ADGRG4Q8IZF6 3080 aa10.24□□□□□ -0.77
CDHR3-205ENST00000468143 EVPLLA8MZ36 301 aa10.24□□□□□ -0.77
CDHR3-205ENST00000468143 ANGPT2O15123 496 aa10.24□□□□□ -0.77
CDHR3-205ENST00000468143 ZNF208O43345 1280 aa10.24□□□□□ -0.77
CDHR3-205ENST00000468143 TPST1O60507 370 aa10.24□□□□□ -0.77
CDHR3-205ENST00000468143 GCM2O75603 506 aaPredicted RBP10.24□□□□□ -0.77
CDHR3-205ENST00000468143 IGHV3-9P01782 118 aa10.24□□□□□ -0.77
CDHR3-205ENST00000468143 ARAFP10398 606 aa10.24□□□□□ -0.77
CDHR3-205ENST00000468143 GPX2P18283 190 aa10.24□□□□□ -0.77
CDHR3-205ENST00000468143 PPIBP23284 216 aaKnown RBP10.24□□□□□ -0.77
CDHR3-205ENST00000468143 FKBP2P26885 142 aaKnown RBP10.24□□□□□ -0.77
CDHR3-205ENST00000468143 AQP1P29972 269 aa10.24□□□□□ -0.77
CDHR3-205ENST00000468143 NTF4P34130 210 aa10.24□□□□□ -0.77
CDHR3-205ENST00000468143 CLK1P49759 484 aaKnown RBP10.24□□□□□ -0.77
CDHR3-205ENST00000468143 ARFIP2P53365 341 aa10.24□□□□□ -0.77
CDHR3-205ENST00000468143 NFYCQ13952 458 aa10.24□□□□□ -0.77
CDHR3-205ENST00000468143 CEACAM7Q14002 265 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms