RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 PIAS4Q8N2W9 510 aaPredicted RBP18.58■□□□□ 0.56
COL9A3-207ENST00000467819 OR52N5Q8NH56 324 aa18.58■□□□□ 0.56
COL9A3-207ENST00000467819 AENQ8WTP8 325 aaKnown RBP18.58■□□□□ 0.56
COL9A3-207ENST00000467819 APH1AQ96BI3 265 aa18.58■□□□□ 0.56
COL9A3-207ENST00000467819 ZG16BQ96DA0 208 aa18.58■□□□□ 0.56
COL9A3-207ENST00000467819 OR11A1Q9GZK7 315 aa18.58■□□□□ 0.56
COL9A3-207ENST00000467819 POLE3Q9NRF9 147 aa18.58■□□□□ 0.56
COL9A3-207ENST00000467819 FAIMQ9NVQ4 179 aa18.58■□□□□ 0.56
COL9A3-207ENST00000467819 CCT8L1PA6NM43 557 aa18.57■□□□□ 0.56
COL9A3-207ENST00000467819 CLDN24A6NM45 220 aa18.57■□□□□ 0.56
COL9A3-207ENST00000467819 ZNF716A6NP11 495 aa18.57■□□□□ 0.56
COL9A3-207ENST00000467819 ANKRD28O15084 1053 aa18.57■□□□□ 0.56
COL9A3-207ENST00000467819 PGM3O95394 542 aa18.57■□□□□ 0.56
COL9A3-207ENST00000467819 PMS2P2O95744 297 aa18.57■□□□□ 0.56
COL9A3-207ENST00000467819 MYZAPP0CAP1 466 aa18.57■□□□□ 0.56
COL9A3-207ENST00000467819 HPCAP84074 193 aa18.57■□□□□ 0.56
COL9A3-207ENST00000467819 CHRNEQ04844 493 aa18.57■□□□□ 0.56
COL9A3-207ENST00000467819 PDK3Q15120 406 aa18.57■□□□□ 0.56
COL9A3-207ENST00000467819 SPANXN4Q5MJ08 99 aa18.57■□□□□ 0.56
COL9A3-207ENST00000467819 EMBQ6PCB8 327 aa18.57■□□□□ 0.56
COL9A3-207ENST00000467819 GRINAQ7Z429 371 aa18.57■□□□□ 0.56
COL9A3-207ENST00000467819 ARFGAP2Q8N6H7 521 aa18.57■□□□□ 0.56
COL9A3-207ENST00000467819 VPS37AQ8NEZ2 397 aa18.57■□□□□ 0.56
COL9A3-207ENST00000467819 PIGXQ8TBF5 258 aa18.57■□□□□ 0.56
COL9A3-207ENST00000467819 C20orf27Q9GZN8 174 aa18.57■□□□□ 0.56
COL9A3-207ENST00000467819 MARCOQ9UEW3 520 aaPredicted RBP18.57■□□□□ 0.56
COL9A3-207ENST00000467819 RAP2CQ9Y3L5 183 aa18.57■□□□□ 0.56
COL9A3-207ENST00000467819 FBN1P35555 2871 aaKnown RBP18.57■□□□□ 0.56
COL9A3-207ENST00000467819 A0A1W2PR80 420 aa18.56■□□□□ 0.56
COL9A3-207ENST00000467819 C1QCP02747 245 aa18.56■□□□□ 0.56
COL9A3-207ENST00000467819 THBS1P07996 1170 aa18.56■□□□□ 0.56
COL9A3-207ENST00000467819 ZNF83P51522 516 aa18.56■□□□□ 0.56
COL9A3-207ENST00000467819 OR2B6P58173 313 aa18.56■□□□□ 0.56
COL9A3-207ENST00000467819 PLAURQ03405 335 aa18.56■□□□□ 0.56
COL9A3-207ENST00000467819 SPOCK1Q08629 439 aa18.56■□□□□ 0.56
COL9A3-207ENST00000467819 CASP8Q14790 479 aa18.56■□□□□ 0.56
COL9A3-207ENST00000467819 KRT71Q3SY84 523 aa18.56■□□□□ 0.56
COL9A3-207ENST00000467819 SSX8Q7RTT4 187 aa18.56■□□□□ 0.56
COL9A3-207ENST00000467819 CCDC103Q8IW40 242 aa18.56■□□□□ 0.56
COL9A3-207ENST00000467819 OIT3Q8WWZ8 545 aa18.56■□□□□ 0.56
COL9A3-207ENST00000467819 TESCQ96BS2 214 aa18.56■□□□□ 0.56
COL9A3-207ENST00000467819 NEURL3Q96EH8 262 aa18.56■□□□□ 0.56
COL9A3-207ENST00000467819 SLC35A5Q9BS91 424 aa18.56■□□□□ 0.56
COL9A3-207ENST00000467819 SAP130Q9H0E3 1048 aa18.56■□□□□ 0.56
COL9A3-207ENST00000467819 BARX1Q9HBU1 254 aaPredicted RBP18.56■□□□□ 0.56
COL9A3-207ENST00000467819 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.56■□□□□ 0.56
COL9A3-207ENST00000467819 HDGFL3Q9Y3E1 203 aa18.56■□□□□ 0.56
COL9A3-207ENST00000467819 MXRA5Q9NR99 2828 aa18.56■□□□□ 0.56
COL9A3-207ENST00000467819 FBN3Q75N90 2809 aa18.55■□□□□ 0.56
COL9A3-207ENST00000467819 PRAMEF27A3QJZ7 478 aa18.55■□□□□ 0.56
COL9A3-207ENST00000467819 GPR171O14626 319 aa18.55■□□□□ 0.56
COL9A3-207ENST00000467819 SSX4O60224 188 aa18.55■□□□□ 0.56
COL9A3-207ENST00000467819 GUSBP08236 651 aa18.55■□□□□ 0.56
COL9A3-207ENST00000467819 NTF4P34130 210 aa18.55■□□□□ 0.56
COL9A3-207ENST00000467819 IDH2P48735 452 aaKnown RBP18.55■□□□□ 0.56
COL9A3-207ENST00000467819 RPL14P50914 215 aaKnown RBP18.55■□□□□ 0.56
COL9A3-207ENST00000467819 NME5P56597 212 aa18.55■□□□□ 0.56
COL9A3-207ENST00000467819 KCNJ10P78508 379 aa18.55■□□□□ 0.56
COL9A3-207ENST00000467819 AGAP6Q5VW22 663 aa18.55■□□□□ 0.56
COL9A3-207ENST00000467819 SLC22A25Q6T423 547 aa18.55■□□□□ 0.56
COL9A3-207ENST00000467819 TMEM108Q6UXF1 575 aa18.55■□□□□ 0.56
COL9A3-207ENST00000467819 DNM1P46Q6ZS02 220 aa18.55■□□□□ 0.56
COL9A3-207ENST00000467819 CXXC5Q7LFL8 322 aaKnown RBP18.55■□□□□ 0.56
COL9A3-207ENST00000467819 ADGRG3Q86Y34 549 aa18.55■□□□□ 0.56
COL9A3-207ENST00000467819 CNOT9Q92600 299 aaKnown RBP18.55■□□□□ 0.56
COL9A3-207ENST00000467819 SORT1Q99523 831 aa18.55■□□□□ 0.56
COL9A3-207ENST00000467819 TMEM109Q9BVC6 243 aa18.55■□□□□ 0.56
COL9A3-207ENST00000467819 NUF2Q9BZD4 464 aa18.55■□□□□ 0.56
COL9A3-207ENST00000467819 EXOSC3Q9NQT5 275 aaKnown RBP18.55■□□□□ 0.56
COL9A3-207ENST00000467819 ASB6Q9NWX5 421 aa18.55■□□□□ 0.56
COL9A3-207ENST00000467819 POU2F3Q9UKI9 436 aa18.55■□□□□ 0.56
COL9A3-207ENST00000467819 B3GALT5Q9Y2C3 310 aa18.55■□□□□ 0.56
COL9A3-207ENST00000467819 YLPM1P49750 1951 aaKnown RBP18.55■□□□□ 0.56
COL9A3-207ENST00000467819 E9PBE3 544 aa18.54■□□□□ 0.56
COL9A3-207ENST00000467819 AP3D1O14617 1153 aa18.54■□□□□ 0.56
COL9A3-207ENST00000467819 MRPL33O75394 65 aaKnown RBP18.54■□□□□ 0.56
COL9A3-207ENST00000467819 LBPP18428 481 aa18.54■□□□□ 0.56
COL9A3-207ENST00000467819 S100A3P33764 101 aa18.54■□□□□ 0.56
COL9A3-207ENST00000467819 SLC1A6P48664 564 aa18.54■□□□□ 0.56
COL9A3-207ENST00000467819 CLNS1AP54105 237 aaKnown RBP18.54■□□□□ 0.56
COL9A3-207ENST00000467819 FOXG1P55316 489 aaPredicted RBP18.54■□□□□ 0.56
COL9A3-207ENST00000467819 DPY19L1Q2PZI1 675 aa18.54■□□□□ 0.56
COL9A3-207ENST00000467819 FAM174BQ3ZCQ3 159 aa18.54■□□□□ 0.56
COL9A3-207ENST00000467819 RNF130Q86XS8 419 aa18.54■□□□□ 0.56
COL9A3-207ENST00000467819 RADILQ96JH8 1075 aa18.54■□□□□ 0.56
COL9A3-207ENST00000467819 CACNG6Q9BXT2 260 aa18.54■□□□□ 0.56
COL9A3-207ENST00000467819 GRIP2Q9C0E4 1043 aa18.54■□□□□ 0.56
COL9A3-207ENST00000467819 YAE1D1Q9NRH1 226 aa18.54■□□□□ 0.56
COL9A3-207ENST00000467819 TAS2R16Q9NYV7 291 aa18.54■□□□□ 0.56
COL9A3-207ENST00000467819 MGAT4BQ9UQ53 548 aa18.54■□□□□ 0.56
COL9A3-207ENST00000467819 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.54■□□□□ 0.56
COL9A3-207ENST00000467819 SLC25A15Q9Y619 301 aa18.54■□□□□ 0.56
COL9A3-207ENST00000467819 CUBNO60494 3623 aa18.53■□□□□ 0.56
COL9A3-207ENST00000467819 TMED7-TICAM2A0A0A6YYA0 188 aa18.53■□□□□ 0.56
COL9A3-207ENST00000467819 GOLGA8QA0A0J9YX86 632 aa18.53■□□□□ 0.56
COL9A3-207ENST00000467819 GOLGA8OA6NCC3 632 aa18.53■□□□□ 0.56
COL9A3-207ENST00000467819 E7EQL1 145 aa18.53■□□□□ 0.56
COL9A3-207ENST00000467819 GOLGA8NF8WBI6 632 aa18.53■□□□□ 0.56
COL9A3-207ENST00000467819 M0R1B8 84 aa18.53■□□□□ 0.56
COL9A3-207ENST00000467819 HMGN4O00479 90 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms