RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 ARL5BQ96KC2 179 aa4.83□□□□□ -1.64
PTCD3-207ENST00000467273 ADAD1Q96M93 576 aaKnown RBP4.83□□□□□ -1.64
PTCD3-207ENST00000467273 PELOQ9BRX2 385 aaKnown RBP4.83□□□□□ -1.64
PTCD3-207ENST00000467273 H2AFJQ9BTM1 129 aa4.83□□□□□ -1.64
PTCD3-207ENST00000467273 TRAF4Q9BUZ4 470 aaPredicted RBP4.83□□□□□ -1.64
PTCD3-207ENST00000467273 OR2B2Q9GZK3 357 aa4.83□□□□□ -1.64
PTCD3-207ENST00000467273 ROGDIQ9GZN7 287 aa4.83□□□□□ -1.64
PTCD3-207ENST00000467273 NSRP1Q9H0G5 558 aaKnown RBP4.83□□□□□ -1.64
PTCD3-207ENST00000467273 ACTR8Q9H981 624 aa4.83□□□□□ -1.64
PTCD3-207ENST00000467273 TMEM165Q9HC07 324 aa4.83□□□□□ -1.64
PTCD3-207ENST00000467273 CHRAC1Q9NRG0 131 aa4.83□□□□□ -1.64
PTCD3-207ENST00000467273 IARS2Q9NSE4 1012 aaKnown RBP4.83□□□□□ -1.64
PTCD3-207ENST00000467273 SIRT3Q9NTG7 399 aaPredicted RBP4.83□□□□□ -1.64
PTCD3-207ENST00000467273 PSME2Q9UL46 239 aa4.83□□□□□ -1.64
PTCD3-207ENST00000467273 PDE10AQ9Y233 779 aa4.83□□□□□ -1.64
PTCD3-207ENST00000467273 HYOU1Q9Y4L1 999 aa4.83□□□□□ -1.64
PTCD3-207ENST00000467273 WIF1Q9Y5W5 379 aa4.83□□□□□ -1.64
PTCD3-207ENST00000467273 PSAT1Q9Y617 370 aa4.83□□□□□ -1.64
PTCD3-207ENST00000467273 CAPN7Q9Y6W3 813 aa4.83□□□□□ -1.64
PTCD3-207ENST00000467273 SPACA6W5XKT8 324 aa4.83□□□□□ -1.64
PTCD3-207ENST00000467273 VWFP04275 2813 aa4.83□□□□□ -1.64
PTCD3-207ENST00000467273 CENPVL1A0A0U1RR11 272 aa4.82□□□□□ -1.64
PTCD3-207ENST00000467273 IQANK1A0A1B0GTG1 560 aa4.82□□□□□ -1.64
PTCD3-207ENST00000467273 SYCE3A1L190 88 aa4.82□□□□□ -1.64
PTCD3-207ENST00000467273 A4D1N5 150 aa4.82□□□□□ -1.64
PTCD3-207ENST00000467273 SLC22A20A6NK97 555 aa4.82□□□□□ -1.64
PTCD3-207ENST00000467273 C4orf51C9J302 202 aa4.82□□□□□ -1.64
PTCD3-207ENST00000467273 FAM157AC9JC47 383 aa4.82□□□□□ -1.64
PTCD3-207ENST00000467273 CDC7O00311 574 aa4.82□□□□□ -1.64
PTCD3-207ENST00000467273 SSX4O60224 188 aa4.82□□□□□ -1.64
PTCD3-207ENST00000467273 VAPBO95292 243 aa4.82□□□□□ -1.64
PTCD3-207ENST00000467273 ETHE1O95571 254 aa4.82□□□□□ -1.64
PTCD3-207ENST00000467273 TGM6O95932 706 aa4.82□□□□□ -1.64
PTCD3-207ENST00000467273 FTCDO95954 541 aa4.82□□□□□ -1.64
PTCD3-207ENST00000467273 PLAUP00749 431 aa4.82□□□□□ -1.64
PTCD3-207ENST00000467273 GYPCP04921 128 aa4.82□□□□□ -1.64
PTCD3-207ENST00000467273 IGHV4-31P0DP07 118 aa4.82□□□□□ -1.64
PTCD3-207ENST00000467273 FCGR2AP12318 317 aa4.82□□□□□ -1.64
PTCD3-207ENST00000467273 NAGAP17050 411 aa4.82□□□□□ -1.64
PTCD3-207ENST00000467273 PSMB1P20618 241 aaKnown RBP4.82□□□□□ -1.64
PTCD3-207ENST00000467273 SAT1P21673 171 aa4.82□□□□□ -1.64
PTCD3-207ENST00000467273 USF1P22415 310 aaPredicted RBP4.82□□□□□ -1.64
PTCD3-207ENST00000467273 GRK5P34947 590 aa4.82□□□□□ -1.64
PTCD3-207ENST00000467273 RPL22P35268 128 aaKnown RBP4.82□□□□□ -1.64
PTCD3-207ENST00000467273 LIPAP38571 399 aa4.82□□□□□ -1.64
PTCD3-207ENST00000467273 CDKN1AP38936 164 aa4.82□□□□□ -1.64
PTCD3-207ENST00000467273 MARCKSL1P49006 195 aa4.82□□□□□ -1.64
PTCD3-207ENST00000467273 NPY2RP49146 381 aa4.82□□□□□ -1.64
PTCD3-207ENST00000467273 CLK3P49761 638 aaKnown RBP4.82□□□□□ -1.64
PTCD3-207ENST00000467273 LHX2P50458 406 aa4.82□□□□□ -1.64
PTCD3-207ENST00000467273 GBX2P52951 348 aaPredicted RBP4.82□□□□□ -1.64
PTCD3-207ENST00000467273 NUDT6P53370 316 aa4.82□□□□□ -1.64
PTCD3-207ENST00000467273 DEFA6Q01524 100 aa4.82□□□□□ -1.64
PTCD3-207ENST00000467273 TGM3Q08188 693 aa4.82□□□□□ -1.64
PTCD3-207ENST00000467273 EBPQ15125 230 aaKnown RBP4.82□□□□□ -1.64
PTCD3-207ENST00000467273 RCN1Q15293 331 aa4.82□□□□□ -1.64
PTCD3-207ENST00000467273 GUSBP1Q15486 140 aa4.82□□□□□ -1.64
PTCD3-207ENST00000467273 TBCEQ15813 527 aaPredicted RBP4.82□□□□□ -1.64
PTCD3-207ENST00000467273 TBCCQ15814 346 aa4.82□□□□□ -1.64
PTCD3-207ENST00000467273 ZNF672Q499Z4 452 aaPredicted RBP4.82□□□□□ -1.64
PTCD3-207ENST00000467273 TIGD2Q4W5G0 525 aa4.82□□□□□ -1.64
PTCD3-207ENST00000467273 UGT3A1Q6NUS8 523 aa4.82□□□□□ -1.64
PTCD3-207ENST00000467273 CAVIN1Q6NZI2 390 aaKnown RBP4.82□□□□□ -1.64
PTCD3-207ENST00000467273 VWA1Q6PCB0 445 aa4.82□□□□□ -1.64
PTCD3-207ENST00000467273 TRAT1Q6PIZ9 186 aa4.82□□□□□ -1.64
PTCD3-207ENST00000467273 KLHL24Q6TFL4 600 aa4.82□□□□□ -1.64
PTCD3-207ENST00000467273 EXOC3L1Q86VI1 746 aa4.82□□□□□ -1.64
PTCD3-207ENST00000467273 ARMC8Q8IUR7 673 aa4.82□□□□□ -1.64
PTCD3-207ENST00000467273 KLHDC8AQ8IYD2 350 aa4.82□□□□□ -1.64
PTCD3-207ENST00000467273 C17orf53Q8N3J3 647 aaPredicted RBP4.82□□□□□ -1.64
PTCD3-207ENST00000467273 FAM47BQ8NA70 645 aa4.82□□□□□ -1.64
PTCD3-207ENST00000467273 SRFBP1Q8NEF9 429 aaKnown RBP4.82□□□□□ -1.64
PTCD3-207ENST00000467273 C17orf47Q8NEP4 570 aa4.82□□□□□ -1.64
PTCD3-207ENST00000467273 CD200R1Q8TD46 325 aa4.82□□□□□ -1.64
PTCD3-207ENST00000467273 ASB10Q8WXI3 467 aa4.82□□□□□ -1.64
PTCD3-207ENST00000467273 NEIL2Q969S2 332 aa4.82□□□□□ -1.64
PTCD3-207ENST00000467273 FBXL8Q96CD0 374 aa4.82□□□□□ -1.64
PTCD3-207ENST00000467273 R3HDM4Q96D70 268 aa4.82□□□□□ -1.64
PTCD3-207ENST00000467273 KTI12Q96EK9 354 aaPredicted RBP4.82□□□□□ -1.64
PTCD3-207ENST00000467273 CMTM3Q96MX0 182 aa4.82□□□□□ -1.64
PTCD3-207ENST00000467273 DGAT2Q96PD7 388 aa4.82□□□□□ -1.64
PTCD3-207ENST00000467273 OR4K3Q96R72 315 aa4.82□□□□□ -1.64
PTCD3-207ENST00000467273 KIFC1Q9BW19 673 aa4.82□□□□□ -1.64
PTCD3-207ENST00000467273 HDHD5Q9BXW7 423 aa4.82□□□□□ -1.64
PTCD3-207ENST00000467273 KLHL4Q9C0H6 718 aa4.82□□□□□ -1.64
PTCD3-207ENST00000467273 WWTR1Q9GZV5 400 aa4.82□□□□□ -1.64
PTCD3-207ENST00000467273 OPN3Q9H1Y3 402 aaPredicted RBP4.82□□□□□ -1.64
PTCD3-207ENST00000467273 KLHL31Q9H511 634 aa4.82□□□□□ -1.64
PTCD3-207ENST00000467273 RNF122Q9H9V4 155 aa4.82□□□□□ -1.64
PTCD3-207ENST00000467273 EML4Q9HC35 981 aaKnown RBP4.82□□□□□ -1.64
PTCD3-207ENST00000467273 RPRD1BQ9NQG5 326 aaKnown RBP4.82□□□□□ -1.64
PTCD3-207ENST00000467273 DNAJC11Q9NVH1 559 aa4.82□□□□□ -1.64
PTCD3-207ENST00000467273 BFARQ9NZS9 450 aa4.82□□□□□ -1.64
PTCD3-207ENST00000467273 SELENONQ9NZV5 590 aa4.82□□□□□ -1.64
PTCD3-207ENST00000467273 ARMCX1Q9P291 453 aa4.82□□□□□ -1.64
PTCD3-207ENST00000467273 GALPQ9UBC7 116 aa4.82□□□□□ -1.64
PTCD3-207ENST00000467273 PROCRQ9UNN8 238 aa4.82□□□□□ -1.64
PTCD3-207ENST00000467273 EXO1Q9UQ84 846 aaKnown RBP4.82□□□□□ -1.64
PTCD3-207ENST00000467273 ZNF175Q9Y473 711 aa4.82□□□□□ -1.64
PTCD3-207ENST00000467273 LOC100653049A0A140TA62 436 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms