RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 PRDM14Q9GZV8 571 aa13.7□□□□□ -0.22
NPHP4-205ENST00000466897 YY1AP1Q9H869 796 aa13.7□□□□□ -0.22
NPHP4-205ENST00000466897 RIMS3Q9UJD0 308 aa13.7□□□□□ -0.22
NPHP4-205ENST00000466897 ZNF835Q9Y2P0 537 aa13.7□□□□□ -0.22
NPHP4-205ENST00000466897 TMED7Q9Y3B3 224 aa13.7□□□□□ -0.22
NPHP4-205ENST00000466897 MED12Q93074 2177 aa13.7□□□□□ -0.22
NPHP4-205ENST00000466897 A0A1B0GTH9 108 aa13.69□□□□□ -0.22
NPHP4-205ENST00000466897 A0A1W2PRQ8 180 aa13.69□□□□□ -0.22
NPHP4-205ENST00000466897 ELOA3DA6NLF2 546 aaPredicted RBP13.69□□□□□ -0.22
NPHP4-205ENST00000466897 H3BML4 177 aa13.69□□□□□ -0.22
NPHP4-205ENST00000466897 hCG_2039718K7EN88 272 aa13.69□□□□□ -0.22
NPHP4-205ENST00000466897 NPIPB7O75200 414 aa13.69□□□□□ -0.22
NPHP4-205ENST00000466897 WISP1O95388 367 aa13.69□□□□□ -0.22
NPHP4-205ENST00000466897 IGF2P01344 180 aa13.69□□□□□ -0.22
NPHP4-205ENST00000466897 POU3F2P20265 443 aaPredicted RBP13.69□□□□□ -0.22
NPHP4-205ENST00000466897 CXCR1P25024 350 aa13.69□□□□□ -0.22
NPHP4-205ENST00000466897 RBM34P42696 430 aaKnown RBP13.69□□□□□ -0.22
NPHP4-205ENST00000466897 CLDN18P56856 261 aa13.69□□□□□ -0.22
NPHP4-205ENST00000466897 SMIM11AP58511 58 aa13.69□□□□□ -0.22
NPHP4-205ENST00000466897 RBPJQ06330 500 aa13.69□□□□□ -0.22
NPHP4-205ENST00000466897 PIN1Q13526 163 aaPredicted RBP13.69□□□□□ -0.22
NPHP4-205ENST00000466897 DGCR6Q14129 220 aa13.69□□□□□ -0.22
NPHP4-205ENST00000466897 GK3PQ14409 553 aa13.69□□□□□ -0.22
NPHP4-205ENST00000466897 KPNB1Q14974 876 aaKnown RBP13.69□□□□□ -0.22
NPHP4-205ENST00000466897 ELOA3BQ3SY89 546 aa13.69□□□□□ -0.22
NPHP4-205ENST00000466897 SYT14P1Q58G82 188 aa13.69□□□□□ -0.22
NPHP4-205ENST00000466897 Q6ZPB1 254 aaPredicted RBP13.69□□□□□ -0.22
NPHP4-205ENST00000466897 ESPNLQ6ZVH7 1005 aa13.69□□□□□ -0.22
NPHP4-205ENST00000466897 GDF7Q7Z4P5 450 aa13.69□□□□□ -0.22
NPHP4-205ENST00000466897 FGD2Q7Z6J4 655 aa13.69□□□□□ -0.22
NPHP4-205ENST00000466897 GGNQ86UU5 652 aa13.69□□□□□ -0.22
NPHP4-205ENST00000466897 LILRA2Q8N149 483 aa13.69□□□□□ -0.22
NPHP4-205ENST00000466897 ELOA3Q8NG57 546 aa13.69□□□□□ -0.22
NPHP4-205ENST00000466897 OR5M1Q8NGP8 315 aa13.69□□□□□ -0.22
NPHP4-205ENST00000466897 STK35Q8TDR2 534 aa13.69□□□□□ -0.22
NPHP4-205ENST00000466897 DDIT4LQ96D03 193 aa13.69□□□□□ -0.22
NPHP4-205ENST00000466897 TIMP4Q99727 224 aa13.69□□□□□ -0.22
NPHP4-205ENST00000466897 FNDC11Q9BVV2 318 aa13.69□□□□□ -0.22
NPHP4-205ENST00000466897 CHID1Q9BWS9 393 aa13.69□□□□□ -0.22
NPHP4-205ENST00000466897 POTEKPQ9BYX7 375 aa13.69□□□□□ -0.22
NPHP4-205ENST00000466897 SLC19A3Q9BZV2 496 aa13.69□□□□□ -0.22
NPHP4-205ENST00000466897 DENND2DQ9H6A0 471 aaPredicted RBP13.69□□□□□ -0.22
NPHP4-205ENST00000466897 ARMC1Q9NVT9 282 aa13.69□□□□□ -0.22
NPHP4-205ENST00000466897 SLC7A7Q9UM01 511 aa13.69□□□□□ -0.22
NPHP4-205ENST00000466897 AURKCQ9UQB9 309 aa13.69□□□□□ -0.22
NPHP4-205ENST00000466897 PHF3Q92576 2039 aaKnown RBP13.68□□□□□ -0.22
NPHP4-205ENST00000466897 HTR3EA5X5Y0 456 aa13.68□□□□□ -0.22
NPHP4-205ENST00000466897 A8MVM7 634 aa13.68□□□□□ -0.22
NPHP4-205ENST00000466897 J3KTA2 159 aa13.68□□□□□ -0.22
NPHP4-205ENST00000466897 ADAMDEC1O15204 470 aa13.68□□□□□ -0.22
NPHP4-205ENST00000466897 FZD7O75084 574 aa13.68□□□□□ -0.22
NPHP4-205ENST00000466897 IL11P20809 199 aa13.68□□□□□ -0.22
NPHP4-205ENST00000466897 TCEA1P23193 301 aaKnown RBP13.68□□□□□ -0.22
NPHP4-205ENST00000466897 PTGS2P35354 604 aa13.68□□□□□ -0.22
NPHP4-205ENST00000466897 HSF1Q00613 529 aa13.68□□□□□ -0.22
NPHP4-205ENST00000466897 TRAM2Q15035 370 aa13.68□□□□□ -0.22
NPHP4-205ENST00000466897 CTU2Q2VPK5 515 aaKnown RBP13.68□□□□□ -0.22
NPHP4-205ENST00000466897 DCST1Q5T197 706 aa13.68□□□□□ -0.22
NPHP4-205ENST00000466897 ZFP1Q6P2D0 407 aa13.68□□□□□ -0.22
NPHP4-205ENST00000466897 GFRALQ6UXV0 394 aa13.68□□□□□ -0.22
NPHP4-205ENST00000466897 FAM57AQ8TBR7 257 aa13.68□□□□□ -0.22
NPHP4-205ENST00000466897 MIB2Q96AX9 1013 aa13.68□□□□□ -0.22
NPHP4-205ENST00000466897 SLCO4A1Q96BD0 722 aa13.68□□□□□ -0.22
NPHP4-205ENST00000466897 WDYHV1Q96HA8 205 aa13.68□□□□□ -0.22
NPHP4-205ENST00000466897 ADGRG7Q96K78 797 aa13.68□□□□□ -0.22
NPHP4-205ENST00000466897 KLHL15Q96M94 604 aa13.68□□□□□ -0.22
NPHP4-205ENST00000466897 HS6ST2Q96MM7 605 aa13.68□□□□□ -0.22
NPHP4-205ENST00000466897 PRSS27Q9BQR3 290 aa13.68□□□□□ -0.22
NPHP4-205ENST00000466897 NMNAT1Q9HAN9 279 aaPredicted RBP13.68□□□□□ -0.22
NPHP4-205ENST00000466897 MAN2C1Q9NTJ4 1040 aa13.68□□□□□ -0.22
NPHP4-205ENST00000466897 PAQR5Q9NXK6 330 aaPredicted RBP13.68□□□□□ -0.22
NPHP4-205ENST00000466897 HDGFL3Q9Y3E1 203 aa13.68□□□□□ -0.22
NPHP4-205ENST00000466897 TMEM72A0PK05 275 aa13.67□□□□□ -0.22
NPHP4-205ENST00000466897 EIF4E1BA6NMX2 242 aaKnown RBP13.67□□□□□ -0.22
NPHP4-205ENST00000466897 DNPH1O43598 174 aa13.67□□□□□ -0.22
NPHP4-205ENST00000466897 FKBP6O75344 327 aa13.67□□□□□ -0.22
NPHP4-205ENST00000466897 KRT36O76013 467 aa13.67□□□□□ -0.22
NPHP4-205ENST00000466897 H1F0P07305 194 aaKnown RBP13.67□□□□□ -0.22
NPHP4-205ENST00000466897 PTGER4P35408 488 aa13.67□□□□□ -0.22
NPHP4-205ENST00000466897 HMGA2P52926 109 aa13.67□□□□□ -0.22
NPHP4-205ENST00000466897 SF3B4Q15427 424 aaKnown RBP eCLIP13.67□□□□□ -0.22
NPHP4-205ENST00000466897 WLSQ5T9L3 541 aa13.67□□□□□ -0.22
NPHP4-205ENST00000466897 WDR88Q6ZMY6 472 aa13.67□□□□□ -0.22
NPHP4-205ENST00000466897 MEIOBQ8N635 442 aa13.67□□□□□ -0.22
NPHP4-205ENST00000466897 GALNT11Q8NCW6 608 aa13.67□□□□□ -0.22
NPHP4-205ENST00000466897 OR6S1Q8NH40 331 aa13.67□□□□□ -0.22
NPHP4-205ENST00000466897 ZPLD1Q8TCW7 415 aa13.67□□□□□ -0.22
NPHP4-205ENST00000466897 CFAP46Q8IYW2 2715 aa13.66□□□□□ -0.22
NPHP4-205ENST00000466897 IGKV1D-42A0A075B6H8 117 aa13.66□□□□□ -0.22
NPHP4-205ENST00000466897 AHRRA9YTQ3 701 aa13.66□□□□□ -0.22
NPHP4-205ENST00000466897 NPIPA2E9PIF3 369 aa13.66□□□□□ -0.22
NPHP4-205ENST00000466897 NPIPA3F8WFD2 350 aa13.66□□□□□ -0.22
NPHP4-205ENST00000466897 WDR1O75083 606 aa13.66□□□□□ -0.22
NPHP4-205ENST00000466897 PMS2P2O95744 297 aa13.66□□□□□ -0.22
NPHP4-205ENST00000466897 PRB1P04280 392 aa13.66□□□□□ -0.22
NPHP4-205ENST00000466897 HOXD4P09016 255 aaPredicted RBP13.66□□□□□ -0.22
NPHP4-205ENST00000466897 FCGR1AP12314 374 aa13.66□□□□□ -0.22
NPHP4-205ENST00000466897 GABRA1P14867 456 aa13.66□□□□□ -0.22
NPHP4-205ENST00000466897 YAP1P46937 504 aaKnown RBP13.66□□□□□ -0.22
NPHP4-205ENST00000466897 STARP49675 285 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms