RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 ZNF679Q8IYX0 411 aa8.15□□□□□ -1.11
HPS4-209ENST00000466781 RLN3Q8WXF3 142 aa8.15□□□□□ -1.11
HPS4-209ENST00000466781 HAS2Q92819 552 aa8.15□□□□□ -1.11
HPS4-209ENST00000466781 ISG20Q96AZ6 181 aaKnown RBP8.15□□□□□ -1.11
HPS4-209ENST00000466781 FAM234AQ9H0X4 552 aa8.15□□□□□ -1.11
HPS4-209ENST00000466781 AK6Q9Y3D8 172 aaKnown RBP8.15□□□□□ -1.11
HPS4-209ENST00000466781 PRAMEF27A3QJZ7 478 aa8.15□□□□□ -1.11
HPS4-209ENST00000466781 TUSC2O75896 110 aa8.15□□□□□ -1.11
HPS4-209ENST00000466781 CT45A6P0DMU7 189 aa8.15□□□□□ -1.11
HPS4-209ENST00000466781 CT45A5P0DMU8 189 aa8.15□□□□□ -1.11
HPS4-209ENST00000466781 CT45A7P0DMV0 189 aa8.15□□□□□ -1.11
HPS4-209ENST00000466781 CT45A8P0DMV1 189 aa8.15□□□□□ -1.11
HPS4-209ENST00000466781 CT45A9P0DMV2 189 aa8.15□□□□□ -1.11
HPS4-209ENST00000466781 ARSDP51689 593 aa8.15□□□□□ -1.11
HPS4-209ENST00000466781 CLDN17P56750 224 aa8.15□□□□□ -1.11
HPS4-209ENST00000466781 GPR176Q14439 515 aa8.15□□□□□ -1.11
HPS4-209ENST00000466781 HES1Q14469 280 aa8.15□□□□□ -1.11
HPS4-209ENST00000466781 CT45A2Q5DJT8 189 aa8.15□□□□□ -1.11
HPS4-209ENST00000466781 CT45A1Q5HYN5 189 aa8.15□□□□□ -1.11
HPS4-209ENST00000466781 PRAMEF9Q5VWM5 478 aa8.15□□□□□ -1.11
HPS4-209ENST00000466781 SCML4Q8N228 414 aa8.15□□□□□ -1.11
HPS4-209ENST00000466781 C19orf47Q8N9M1 422 aaKnown RBP8.15□□□□□ -1.11
HPS4-209ENST00000466781 ASCC1Q8N9N2 400 aaKnown RBP8.15□□□□□ -1.11
HPS4-209ENST00000466781 CYB561A3Q8NBI2 242 aa8.15□□□□□ -1.11
HPS4-209ENST00000466781 OR7G2Q8NG99 324 aa8.15□□□□□ -1.11
HPS4-209ENST00000466781 CT45A3Q8NHU0 189 aa8.15□□□□□ -1.11
HPS4-209ENST00000466781 SGK3Q96BR1 496 aa8.15□□□□□ -1.11
HPS4-209ENST00000466781 CXCL16Q9H2A7 254 aa8.15□□□□□ -1.11
HPS4-209ENST00000466781 TM7SF3Q9NS93 570 aa8.15□□□□□ -1.11
HPS4-209ENST00000466781 LRRC30A6NM36 301 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 SUSD5O60279 629 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 SLC22A5O76082 557 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 EGFP01133 1207 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 ITGB2P05107 769 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 ITGB8P26012 769 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 EPHA5P54756 1037 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 RPS18P62269 152 aaKnown RBP8.14□□□□□ -1.11
HPS4-209ENST00000466781 VASNQ6EMK4 673 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 HEPHL1Q6MZM0 1159 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 CPOQ8IVL8 374 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 CBARPQ8N350 705 aaPredicted RBP8.14□□□□□ -1.11
HPS4-209ENST00000466781 OR4A16Q8NH70 328 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 NETO1Q8TDF5 533 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 ADAMTS19Q8TE59 1207 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 EDAQ92838 391 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 PRRT1Q99946 306 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 SORBS1Q9BX66 1292 aaKnown RBP8.14□□□□□ -1.11
HPS4-209ENST00000466781 CACNG6Q9BXT2 260 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 CALHM2Q9HA72 323 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 SLC6A20Q9NP91 592 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 A0A1W2PQ09 198 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 PSMB10P40306 273 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 PPP5CP53041 499 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 WNT4P56705 351 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 DUSP7Q16829 419 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 SLC22A6Q4U2R8 563 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 COQ5Q5HYK3 327 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 OR9Q2Q8NGE9 314 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 ASB17Q8WXJ9 295 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 EPHX3Q9H6B9 360 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 UBQLN4Q9NRR5 601 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 OBP2AQ9NY56 170 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 KIF25Q9UIL4 384 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 MRPS2Q9Y399 296 aaKnown RBP8.14□□□□□ -1.11
HPS4-209ENST00000466781 NFS1Q9Y697 457 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 MEIS3P1A6NDR6 274 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 NAP1L6A6NFF2 107 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 ADAM12O43184 909 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 SLC16A7O60669 478 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 CRYZL1O95825 349 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 PTAFRP25105 342 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 SELENOWP63302 87 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 POU3F1Q03052 451 aaPredicted RBP8.14□□□□□ -1.11
HPS4-209ENST00000466781 ERV3-1Q14264 604 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 HSF5Q4G112 596 aaPredicted RBP8.14□□□□□ -1.11
HPS4-209ENST00000466781 AADACL3Q5VUY0 350 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 OR5M10Q6IEU7 315 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 COMMD7Q86VX2 200 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 STT3BQ8TCJ2 826 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 C17orf50Q8WW18 174 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 LGALS12Q96DT0 336 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 SAT2Q96F10 170 aaPredicted RBP8.14□□□□□ -1.11
HPS4-209ENST00000466781 ZNF597Q96LX8 424 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 PRRC1Q96M27 445 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 OR7D2Q96RA2 312 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 OR2B2Q9GZK3 357 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 OLAHQ9NV23 265 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 COQ3Q9NZJ6 369 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 KCND3Q9UK17 655 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 NME7Q9Y5B8 376 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 NUBP2Q9Y5Y2 271 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 CSNK1G3Q9Y6M4 447 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 APOC3P02656 99 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 BMP1P13497 986 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 FECHP22830 423 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 HABP2Q14520 560 aaPredicted RBP8.14□□□□□ -1.11
HPS4-209ENST00000466781 MPEG1Q2M385 716 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 PDLIM3Q53GG5 364 aaPredicted RBP8.14□□□□□ -1.11
HPS4-209ENST00000466781 METTL11BQ5VVY1 283 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 OCSTAMPQ9BR26 566 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms