RNA–Protein interactions for RNA: ENST00000466159.6

SYNE1-217, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYNE1, Length 2,610 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-217ENST00000466159 ZMYND19Q96E35 227 aaPredicted RBP8.22□□□□□ -1.09
SYNE1-217ENST00000466159 NECTIN4Q96NY8 510 aa8.22□□□□□ -1.09
SYNE1-217ENST00000466159 DGAT2Q96PD7 388 aa8.22□□□□□ -1.09
SYNE1-217ENST00000466159 ORAI3Q9BRQ5 295 aa8.22□□□□□ -1.09
SYNE1-217ENST00000466159 CCDC86Q9H6F5 360 aaKnown RBP8.22□□□□□ -1.09
SYNE1-217ENST00000466159 RNF121Q9H920 327 aa8.22□□□□□ -1.09
SYNE1-217ENST00000466159 INPP5EQ9NRR6 644 aa8.22□□□□□ -1.09
SYNE1-217ENST00000466159 DDX28Q9NUL7 540 aaKnown RBP8.22□□□□□ -1.09
SYNE1-217ENST00000466159 NUFIP1Q9UHK0 495 aaKnown RBP8.22□□□□□ -1.09
SYNE1-217ENST00000466159 ADAM18Q9Y3Q7 739 aa8.22□□□□□ -1.09
SYNE1-217ENST00000466159 TMEM184BQ9Y519 407 aaPredicted RBP8.22□□□□□ -1.09
SYNE1-217ENST00000466159 CACNA1IQ9P0X4 2223 aa8.22□□□□□ -1.09
SYNE1-217ENST00000466159 A0A0G2JMP0 313 aa8.22□□□□□ -1.09
SYNE1-217ENST00000466159 A0A0X1KG70 313 aa8.22□□□□□ -1.09
SYNE1-217ENST00000466159 HMX3A6NHT5 357 aa8.22□□□□□ -1.09
SYNE1-217ENST00000466159 MCIDASD6RGH6 385 aa8.22□□□□□ -1.09
SYNE1-217ENST00000466159 IMPA2O14732 288 aa8.22□□□□□ -1.09
SYNE1-217ENST00000466159 IGLV3-19P01714 112 aa8.22□□□□□ -1.09
SYNE1-217ENST00000466159 HLA-DQB1P01920 261 aa8.22□□□□□ -1.09
SYNE1-217ENST00000466159 CFL1P23528 166 aaKnown RBP8.22□□□□□ -1.09
SYNE1-217ENST00000466159 F8A1P23610 371 aa8.22□□□□□ -1.09
SYNE1-217ENST00000466159 PPM1FP49593 454 aaPredicted RBP8.22□□□□□ -1.09
SYNE1-217ENST00000466159 ATP12AP54707 1039 aa8.22□□□□□ -1.09
SYNE1-217ENST00000466159 ZNF141Q15928 474 aa8.22□□□□□ -1.09
SYNE1-217ENST00000466159 BCORP1Q8N888 145 aa8.22□□□□□ -1.09
SYNE1-217ENST00000466159 FAM98AQ8NCA5 519 aaKnown RBP8.22□□□□□ -1.09
SYNE1-217ENST00000466159 OR4M2Q8NGB6 313 aa8.22□□□□□ -1.09
SYNE1-217ENST00000466159 ZNRF4Q8WWF5 429 aa8.22□□□□□ -1.09
SYNE1-217ENST00000466159 MMABQ96EY8 250 aaPredicted RBP8.22□□□□□ -1.09
SYNE1-217ENST00000466159 PGLYRP3Q96LB9 341 aa8.22□□□□□ -1.09
SYNE1-217ENST00000466159 FRMD6Q96NE9 622 aa8.22□□□□□ -1.09
SYNE1-217ENST00000466159 LMF1Q96S06 567 aa8.22□□□□□ -1.09
SYNE1-217ENST00000466159 TMEM43Q9BTV4 400 aa8.22□□□□□ -1.09
SYNE1-217ENST00000466159 TPSD1Q9BZJ3 242 aa8.22□□□□□ -1.09
SYNE1-217ENST00000466159 MOV10Q9HCE1 1003 aaKnown RBP8.22□□□□□ -1.09
SYNE1-217ENST00000466159 Q9N2J8 555 aa8.22□□□□□ -1.09
SYNE1-217ENST00000466159 HAO2Q9NYQ3 351 aa8.22□□□□□ -1.09
SYNE1-217ENST00000466159 EXTL2Q9UBQ6 330 aa8.22□□□□□ -1.09
SYNE1-217ENST00000466159 RPS6KB2Q9UBS0 482 aa8.22□□□□□ -1.09
SYNE1-217ENST00000466159 CHRNA9Q9UGM1 479 aa8.22□□□□□ -1.09
SYNE1-217ENST00000466159 BAIAP2Q9UQB8 552 aa8.22□□□□□ -1.09
SYNE1-217ENST00000466159 OR10H1Q9Y4A9 318 aa8.22□□□□□ -1.09
SYNE1-217ENST00000466159 PCDHGB7Q9Y5F8 929 aa8.22□□□□□ -1.09
SYNE1-217ENST00000466159 IER3IP1Q9Y5U9 82 aa8.22□□□□□ -1.09
SYNE1-217ENST00000466159 SRPX2O60687 465 aaPredicted RBP8.21□□□□□ -1.09
SYNE1-217ENST00000466159 PRAMEF2O60811 474 aa8.21□□□□□ -1.09
SYNE1-217ENST00000466159 SOX30O94993 753 aa8.21□□□□□ -1.09
SYNE1-217ENST00000466159 CSTAP01040 98 aa8.21□□□□□ -1.09
SYNE1-217ENST00000466159 IFNGP01579 166 aa8.21□□□□□ -1.09
SYNE1-217ENST00000466159 TFP02787 698 aa8.21□□□□□ -1.09
SYNE1-217ENST00000466159 IFNA16P05015 189 aa8.21□□□□□ -1.09
SYNE1-217ENST00000466159 PSKH1P11801 424 aa8.21□□□□□ -1.09
SYNE1-217ENST00000466159 THBS2P35442 1172 aa8.21□□□□□ -1.09
SYNE1-217ENST00000466159 DDOSTP39656 456 aa8.21□□□□□ -1.09
SYNE1-217ENST00000466159 MAP2K3P46734 347 aa8.21□□□□□ -1.09
SYNE1-217ENST00000466159 BLKP51451 505 aa8.21□□□□□ -1.09
SYNE1-217ENST00000466159 IGLV3-21P80748 117 aaPredicted RBP8.21□□□□□ -1.09
SYNE1-217ENST00000466159 QPRTQ15274 297 aa8.21□□□□□ -1.09
SYNE1-217ENST00000466159 BCL2A1Q16548 175 aa8.21□□□□□ -1.09
SYNE1-217ENST00000466159 TP53I3Q53FA7 332 aa8.21□□□□□ -1.09
SYNE1-217ENST00000466159 HBMQ6B0K9 141 aa8.21□□□□□ -1.09
SYNE1-217ENST00000466159 ARHGAP11AQ6P4F7 1023 aa8.21□□□□□ -1.09
SYNE1-217ENST00000466159 ZNF550Q7Z398 422 aa8.21□□□□□ -1.09
SYNE1-217ENST00000466159 GPALPP1Q8IXQ4 340 aa8.21□□□□□ -1.09
SYNE1-217ENST00000466159 ZNF595Q8IYB9 648 aa8.21□□□□□ -1.09
SYNE1-217ENST00000466159 GATSQ8NAP1 163 aa8.21□□□□□ -1.09
SYNE1-217ENST00000466159 UBASH3BQ8TF42 649 aa8.21□□□□□ -1.09
SYNE1-217ENST00000466159 GHSRQ92847 366 aa8.21□□□□□ -1.09
SYNE1-217ENST00000466159 SMAD5Q99717 465 aaKnown RBP8.21□□□□□ -1.09
SYNE1-217ENST00000466159 BEX2Q9BXY8 128 aa8.21□□□□□ -1.09
SYNE1-217ENST00000466159 OR10A5Q9H207 317 aa8.21□□□□□ -1.09
SYNE1-217ENST00000466159 SERTAD3Q9UJW9 196 aa8.21□□□□□ -1.09
SYNE1-217ENST00000466159 RASD1Q9Y272 281 aa8.21□□□□□ -1.09
SYNE1-217ENST00000466159 MRPS33Q9Y291 106 aaKnown RBP8.21□□□□□ -1.09
SYNE1-217ENST00000466159 SEC16AO15027 2179 aa8.21□□□□□ -1.09
SYNE1-217ENST00000466159 A0A1W2PPK0 400 aa8.21□□□□□ -1.1
SYNE1-217ENST00000466159 A0A1W2PRG6 482 aa8.21□□□□□ -1.1
SYNE1-217ENST00000466159 CLDN4O14493 209 aa8.21□□□□□ -1.1
SYNE1-217ENST00000466159 LYRM1O43325 122 aa8.21□□□□□ -1.1
SYNE1-217ENST00000466159 IDH3BO43837 385 aa8.21□□□□□ -1.1
SYNE1-217ENST00000466159 SLC19A2O60779 497 aa8.21□□□□□ -1.1
SYNE1-217ENST00000466159 NDUFB2O95178 105 aa8.21□□□□□ -1.1
SYNE1-217ENST00000466159 PAHP00439 452 aa8.21□□□□□ -1.1
SYNE1-217ENST00000466159 WNT1P04628 370 aa8.21□□□□□ -1.1
SYNE1-217ENST00000466159 EIF4EP06730 217 aaKnown RBP8.21□□□□□ -1.1
SYNE1-217ENST00000466159 NAA10P41227 235 aaPredicted RBP8.21□□□□□ -1.1
SYNE1-217ENST00000466159 RIN1Q13671 783 aa8.21□□□□□ -1.1
SYNE1-217ENST00000466159 ZFP69Q49AA0 526 aa8.21□□□□□ -1.1
SYNE1-217ENST00000466159 ACSM3Q53FZ2 586 aa8.21□□□□□ -1.1
SYNE1-217ENST00000466159 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.21□□□□□ -1.1
SYNE1-217ENST00000466159 DMKNQ6E0U4 476 aaPredicted RBP8.21□□□□□ -1.1
SYNE1-217ENST00000466159 SFXN4Q6P4A7 337 aa8.21□□□□□ -1.1
SYNE1-217ENST00000466159 PLET1Q6UQ28 207 aa8.21□□□□□ -1.1
SYNE1-217ENST00000466159 TRILQ7L0X0 811 aa8.21□□□□□ -1.1
SYNE1-217ENST00000466159 ACOT12Q8WYK0 555 aa8.21□□□□□ -1.1
SYNE1-217ENST00000466159 SLC7A6Q92536 515 aa8.21□□□□□ -1.1
SYNE1-217ENST00000466159 SGTBQ96EQ0 304 aa8.21□□□□□ -1.1
SYNE1-217ENST00000466159 FYTTD1Q96QD9 318 aaKnown RBP8.21□□□□□ -1.1
SYNE1-217ENST00000466159 KCNJ15Q99712 375 aa8.21□□□□□ -1.1
SYNE1-217ENST00000466159 WACQ9BTA9 647 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms