RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 NEDD8Q15843 81 aa15.41■□□□□ 0.06
EXOSC3-203ENST00000465229 ZSWIM7Q19AV6 140 aa15.41■□□□□ 0.06
EXOSC3-203ENST00000465229 OR5M10Q6IEU7 315 aa15.41■□□□□ 0.06
EXOSC3-203ENST00000465229 CBLN3Q6UW01 205 aa15.41■□□□□ 0.06
EXOSC3-203ENST00000465229 RBM45Q8IUH3 476 aaKnown RBP15.41■□□□□ 0.06
EXOSC3-203ENST00000465229 LACC1Q8IV20 430 aa15.41■□□□□ 0.06
EXOSC3-203ENST00000465229 FAM71CQ8NEG0 241 aa15.41■□□□□ 0.06
EXOSC3-203ENST00000465229 VANGL1Q8TAA9 524 aaPredicted RBP15.41■□□□□ 0.06
EXOSC3-203ENST00000465229 ISOC1Q96CN7 298 aa15.41■□□□□ 0.06
EXOSC3-203ENST00000465229 ARMC7Q9H6L4 198 aa15.41■□□□□ 0.06
EXOSC3-203ENST00000465229 KLHL1Q9NR64 748 aa15.41■□□□□ 0.06
EXOSC3-203ENST00000465229 PAK1IP1Q9NWT1 392 aaPredicted RBP15.41■□□□□ 0.06
EXOSC3-203ENST00000465229 DNAJB12Q9NXW2 375 aaKnown RBP15.41■□□□□ 0.06
EXOSC3-203ENST00000465229 RNF6Q9Y252 685 aa15.41■□□□□ 0.06
EXOSC3-203ENST00000465229 CARD8Q9Y2G2 431 aa15.41■□□□□ 0.06
EXOSC3-203ENST00000465229 HRH3Q9Y5N1 445 aa15.41■□□□□ 0.06
EXOSC3-203ENST00000465229 WIF1Q9Y5W5 379 aa15.41■□□□□ 0.06
EXOSC3-203ENST00000465229 PRRC2CQ9Y520 2896 aaKnown RBP15.41■□□□□ 0.06
EXOSC3-203ENST00000465229 SPTA1P02549 2419 aa15.4■□□□□ 0.06
EXOSC3-203ENST00000465229 EML6Q6ZMW3 1958 aa15.4■□□□□ 0.06
EXOSC3-203ENST00000465229 SH3PXD2BA1X283 911 aa15.4■□□□□ 0.06
EXOSC3-203ENST00000465229 TRIM64BA6NI03 449 aa15.4■□□□□ 0.06
EXOSC3-203ENST00000465229 B4DXG7 233 aa15.4■□□□□ 0.06
EXOSC3-203ENST00000465229 NME2P1O60361 137 aa15.4■□□□□ 0.06
EXOSC3-203ENST00000465229 MPZL2O60487 215 aa15.4■□□□□ 0.06
EXOSC3-203ENST00000465229 TRMUO75648 421 aaKnown RBP15.4■□□□□ 0.06
EXOSC3-203ENST00000465229 SNX4O95219 450 aa15.4■□□□□ 0.06
EXOSC3-203ENST00000465229 GASTP01350 101 aa15.4■□□□□ 0.06
EXOSC3-203ENST00000465229 UBL4AP11441 157 aa15.4■□□□□ 0.06
EXOSC3-203ENST00000465229 CD46P15529 392 aa15.4■□□□□ 0.06
EXOSC3-203ENST00000465229 ENDOUP21128 410 aaKnown RBP15.4■□□□□ 0.06
EXOSC3-203ENST00000465229 PCMT1P22061 227 aa15.4■□□□□ 0.06
EXOSC3-203ENST00000465229 NME2P22392 152 aa15.4■□□□□ 0.06
EXOSC3-203ENST00000465229 DNASE1L1P49184 302 aa15.4■□□□□ 0.06
EXOSC3-203ENST00000465229 GPR85P60893 370 aa15.4■□□□□ 0.06
EXOSC3-203ENST00000465229 ROR2Q01974 943 aaKnown RBP15.4■□□□□ 0.06
EXOSC3-203ENST00000465229 SKP2Q13309 424 aa15.4■□□□□ 0.06
EXOSC3-203ENST00000465229 COL28A1Q2UY09 1125 aa15.4■□□□□ 0.06
EXOSC3-203ENST00000465229 EIPR1Q53HC9 387 aa15.4■□□□□ 0.06
EXOSC3-203ENST00000465229 ZNF766Q5HY98 468 aa15.4■□□□□ 0.06
EXOSC3-203ENST00000465229 FGD3Q5JSP0 725 aa15.4■□□□□ 0.06
EXOSC3-203ENST00000465229 KLHL17Q6TDP4 642 aa15.4■□□□□ 0.06
EXOSC3-203ENST00000465229 CD300LDQ6UXZ3 194 aa15.4■□□□□ 0.06
EXOSC3-203ENST00000465229 GRAMD2AQ8IUY3 354 aa15.4■□□□□ 0.06
EXOSC3-203ENST00000465229 MISPQ8IVT2 679 aa15.4■□□□□ 0.06
EXOSC3-203ENST00000465229 WDSUB1Q8N9V3 476 aa15.4■□□□□ 0.06
EXOSC3-203ENST00000465229 MUL1Q969V5 352 aa15.4■□□□□ 0.06
EXOSC3-203ENST00000465229 SCMH1Q96GD3 660 aa15.4■□□□□ 0.06
EXOSC3-203ENST00000465229 ARHGAP9Q9BRR9 750 aa15.4■□□□□ 0.06
EXOSC3-203ENST00000465229 FNDC11Q9BVV2 318 aa15.4■□□□□ 0.06
EXOSC3-203ENST00000465229 LAT2Q9GZY6 243 aa15.4■□□□□ 0.06
EXOSC3-203ENST00000465229 ANKRD19PQ9H560 264 aa15.4■□□□□ 0.06
EXOSC3-203ENST00000465229 SDHAF3Q9NRP4 125 aa15.4■□□□□ 0.06
EXOSC3-203ENST00000465229 KLHL28Q9NXS3 571 aa15.4■□□□□ 0.06
EXOSC3-203ENST00000465229 RHCGQ9UBD6 479 aa15.4■□□□□ 0.06
EXOSC3-203ENST00000465229 SLC13A4Q9UKG4 626 aa15.4■□□□□ 0.06
EXOSC3-203ENST00000465229 TP53TG5Q9Y2B4 290 aa15.4■□□□□ 0.06
EXOSC3-203ENST00000465229 TNRC6AQ8NDV7 1962 aaKnown RBP15.4■□□□□ 0.06
EXOSC3-203ENST00000465229 ZAR1LA6NP61 321 aa15.39■□□□□ 0.05
EXOSC3-203ENST00000465229 PTGES3LE9PB15 166 aa15.39■□□□□ 0.05
EXOSC3-203ENST00000465229 M0R3H8 397 aa15.39■□□□□ 0.05
EXOSC3-203ENST00000465229 ZNF264O43296 627 aa15.39■□□□□ 0.05
EXOSC3-203ENST00000465229 FRS3O43559 492 aa15.39■□□□□ 0.05
EXOSC3-203ENST00000465229 HCRTR2O43614 444 aa15.39■□□□□ 0.05
EXOSC3-203ENST00000465229 XPNPEP2O43895 674 aa15.39■□□□□ 0.05
EXOSC3-203ENST00000465229 ADAM11O75078 769 aa15.39■□□□□ 0.05
EXOSC3-203ENST00000465229 TRIM3O75382 744 aaPredicted RBP15.39■□□□□ 0.05
EXOSC3-203ENST00000465229 FMO3P31513 532 aa15.39■□□□□ 0.05
EXOSC3-203ENST00000465229 CRISP1P54107 249 aa15.39■□□□□ 0.05
EXOSC3-203ENST00000465229 TMBIM6P55061 237 aa15.39■□□□□ 0.05
EXOSC3-203ENST00000465229 MVKQ03426 396 aa15.39■□□□□ 0.05
EXOSC3-203ENST00000465229 ZNF117Q03924 483 aa15.39■□□□□ 0.05
EXOSC3-203ENST00000465229 COX10Q12887 443 aa15.39■□□□□ 0.05
EXOSC3-203ENST00000465229 SEC23BQ15437 767 aa15.39■□□□□ 0.05
EXOSC3-203ENST00000465229 GALNTL5Q7Z4T8 443 aa15.39■□□□□ 0.05
EXOSC3-203ENST00000465229 SULF2Q8IWU5 870 aa15.39■□□□□ 0.05
EXOSC3-203ENST00000465229 SVOPQ8N4V2 548 aa15.39■□□□□ 0.05
EXOSC3-203ENST00000465229 RBMXL3Q8N7X1 1067 aaKnown RBP15.39■□□□□ 0.05
EXOSC3-203ENST00000465229 OR6T1Q8NGN1 323 aa15.39■□□□□ 0.05
EXOSC3-203ENST00000465229 SLC7A13Q8TCU3 470 aa15.39■□□□□ 0.05
EXOSC3-203ENST00000465229 APH1BQ8WW43 257 aa15.39■□□□□ 0.05
EXOSC3-203ENST00000465229 SGCDQ92629 289 aa15.39■□□□□ 0.05
EXOSC3-203ENST00000465229 SH3YL1Q96HL8 342 aaPredicted RBP15.39■□□□□ 0.05
EXOSC3-203ENST00000465229 C5orf34Q96MH7 638 aa15.39■□□□□ 0.05
EXOSC3-203ENST00000465229 SIGLEC11Q96RL6 698 aa15.39■□□□□ 0.05
EXOSC3-203ENST00000465229 UCK2Q9BZX2 261 aa15.39■□□□□ 0.05
EXOSC3-203ENST00000465229 TUBD1Q9UJT1 453 aa15.39■□□□□ 0.05
EXOSC3-203ENST00000465229 ATRXP46100 2492 aa15.39■□□□□ 0.05
EXOSC3-203ENST00000465229 NBEAQ8NFP9 2946 aa15.39■□□□□ 0.05
EXOSC3-203ENST00000465229 CACNA1BQ00975 2339 aa15.39■□□□□ 0.05
EXOSC3-203ENST00000465229 IGLV3-32A0A0A0MS00 114 aa15.39■□□□□ 0.05
EXOSC3-203ENST00000465229 TRAV17A0A0B4J275 112 aa15.39■□□□□ 0.05
EXOSC3-203ENST00000465229 PINLYPA6NC86 204 aa15.39■□□□□ 0.05
EXOSC3-203ENST00000465229 EIF4E2O60573 245 aaKnown RBP15.39■□□□□ 0.05
EXOSC3-203ENST00000465229 CYP7B1O75881 506 aa15.39■□□□□ 0.05
EXOSC3-203ENST00000465229 GKN3PP0CG01 181 aa15.39■□□□□ 0.05
EXOSC3-203ENST00000465229 OSMP13725 252 aa15.39■□□□□ 0.05
EXOSC3-203ENST00000465229 PRG2P13727 222 aa15.39■□□□□ 0.05
EXOSC3-203ENST00000465229 GABRB1P18505 474 aa15.39■□□□□ 0.05
EXOSC3-203ENST00000465229 FUT4P22083 530 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms