RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 Q96M66 194 aa8.07□□□□□ -1.12
APP-213ENST00000464867 C1orf147Q96MC9 270 aaPredicted RBP8.07□□□□□ -1.12
APP-213ENST00000464867 SLC30A2Q9BRI3 323 aa8.07□□□□□ -1.12
APP-213ENST00000464867 ZNF442Q9H7R0 627 aa8.07□□□□□ -1.12
APP-213ENST00000464867 COQ10BQ9H8M1 238 aa8.07□□□□□ -1.12
APP-213ENST00000464867 MOV10Q9HCE1 1003 aaKnown RBP8.07□□□□□ -1.12
APP-213ENST00000464867 OBP2BQ9NPH6 170 aa8.07□□□□□ -1.12
APP-213ENST00000464867 FAM53CQ9NYF3 392 aa8.07□□□□□ -1.12
APP-213ENST00000464867 PLEK2Q9NYT0 353 aa8.07□□□□□ -1.12
APP-213ENST00000464867 IGKV3D-15A0A087WSY6 115 aa8.06□□□□□ -1.12
APP-213ENST00000464867 TTC36A6NLP5 189 aa8.06□□□□□ -1.12
APP-213ENST00000464867 KLF11O14901 512 aa8.06□□□□□ -1.12
APP-213ENST00000464867 FSHBP01225 129 aa8.06□□□□□ -1.12
APP-213ENST00000464867 FGGP02679 453 aa8.06□□□□□ -1.12
APP-213ENST00000464867 CDH2P19022 906 aaPredicted RBP8.06□□□□□ -1.12
APP-213ENST00000464867 COL8A2P25067 703 aa8.06□□□□□ -1.12
APP-213ENST00000464867 GABRA3P34903 492 aa8.06□□□□□ -1.12
APP-213ENST00000464867 THBS4P35443 961 aa8.06□□□□□ -1.12
APP-213ENST00000464867 ATP4BP51164 291 aa8.06□□□□□ -1.12
APP-213ENST00000464867 RAG2P55895 527 aa8.06□□□□□ -1.12
APP-213ENST00000464867 TRA2BP62995 288 aaKnown RBP8.06□□□□□ -1.12
APP-213ENST00000464867 CSNK2A1P68400 391 aaPredicted RBP8.06□□□□□ -1.12
APP-213ENST00000464867 SLC25A3Q00325 362 aa8.06□□□□□ -1.12
APP-213ENST00000464867 IFT88Q13099 833 aa8.06□□□□□ -1.12
APP-213ENST00000464867 SELENBP1Q13228 472 aa8.06□□□□□ -1.12
APP-213ENST00000464867 SLC29A2Q14542 456 aa8.06□□□□□ -1.12
APP-213ENST00000464867 PDCD1Q15116 288 aa8.06□□□□□ -1.12
APP-213ENST00000464867 PDK3Q15120 406 aa8.06□□□□□ -1.12
APP-213ENST00000464867 C2orf68Q2NKX9 166 aa8.06□□□□□ -1.12
APP-213ENST00000464867 GLE1Q53GS7 698 aaKnown RBP8.06□□□□□ -1.12
APP-213ENST00000464867 ELFN2Q5R3F8 820 aa8.06□□□□□ -1.12
APP-213ENST00000464867 RELL1Q8IUW5 271 aa8.06□□□□□ -1.12
APP-213ENST00000464867 PPIL6Q8IXY8 311 aa8.06□□□□□ -1.12
APP-213ENST00000464867 METTL4Q8N3J2 472 aa8.06□□□□□ -1.12
APP-213ENST00000464867 OR52E4Q8NGH9 312 aa8.06□□□□□ -1.12
APP-213ENST00000464867 UBTD2Q8WUN7 234 aa8.06□□□□□ -1.12
APP-213ENST00000464867 POP5Q969H6 163 aaKnown RBP8.06□□□□□ -1.12
APP-213ENST00000464867 ATP6V1E2Q96A05 226 aa8.06□□□□□ -1.12
APP-213ENST00000464867 EXOSC8Q96B26 276 aaKnown RBP8.06□□□□□ -1.12
APP-213ENST00000464867 ZHX1-C8orf76Q96EF9 292 aa8.06□□□□□ -1.12
APP-213ENST00000464867 CFAP36Q96G28 342 aa8.06□□□□□ -1.12
APP-213ENST00000464867 MRGPRX4Q96LA9 322 aa8.06□□□□□ -1.12
APP-213ENST00000464867 WWC2-AS2Q96NR7 200 aa8.06□□□□□ -1.12
APP-213ENST00000464867 OR5B2Q96R09 309 aa8.06□□□□□ -1.12
APP-213ENST00000464867 MS4A7Q9GZW8 240 aaPredicted RBP8.06□□□□□ -1.12
APP-213ENST00000464867 ZNF275Q9NSD4 429 aaPredicted RBP8.06□□□□□ -1.12
APP-213ENST00000464867 PARPBPQ9NWS1 579 aa8.06□□□□□ -1.12
APP-213ENST00000464867 NMRK1Q9NWW6 199 aa8.06□□□□□ -1.12
APP-213ENST00000464867 REV1Q9UBZ9 1251 aa8.06□□□□□ -1.12
APP-213ENST00000464867 ICAM5Q9UMF0 924 aa8.06□□□□□ -1.12
APP-213ENST00000464867 ACOT9Q9Y305 439 aa8.06□□□□□ -1.12
APP-213ENST00000464867 A0A087WV62 115 aa8.05□□□□□ -1.12
APP-213ENST00000464867 CLPSL1A2RUU4 121 aa8.05□□□□□ -1.12
APP-213ENST00000464867 M0R233 179 aa8.05□□□□□ -1.12
APP-213ENST00000464867 EFNA2O43921 213 aa8.05□□□□□ -1.12
APP-213ENST00000464867 OXSR1O95747 527 aaPredicted RBP8.05□□□□□ -1.12
APP-213ENST00000464867 TSPAN15O95858 294 aa8.05□□□□□ -1.12
APP-213ENST00000464867 NGFRP08138 427 aa8.05□□□□□ -1.12
APP-213ENST00000464867 PIK3CGP48736 1102 aa8.05□□□□□ -1.12
APP-213ENST00000464867 PRIM2P49643 509 aa8.05□□□□□ -1.12
APP-213ENST00000464867 FOXG1P55316 489 aaPredicted RBP8.05□□□□□ -1.12
APP-213ENST00000464867 UBE2NP61088 152 aaKnown RBP8.05□□□□□ -1.12
APP-213ENST00000464867 MRPS11P82912 194 aaKnown RBP8.05□□□□□ -1.12
APP-213ENST00000464867 NAAAQ02083 359 aa8.05□□□□□ -1.12
APP-213ENST00000464867 POU3F1Q03052 451 aaPredicted RBP8.05□□□□□ -1.12
APP-213ENST00000464867 VPS26BQ4G0F5 336 aa8.05□□□□□ -1.12
APP-213ENST00000464867 OTUD3Q5T2D3 398 aaPredicted RBP8.05□□□□□ -1.12
APP-213ENST00000464867 KPRPQ5T749 579 aaPredicted RBP8.05□□□□□ -1.12
APP-213ENST00000464867 LCE4AQ5TA78 99 aa8.05□□□□□ -1.12
APP-213ENST00000464867 FRG2Q64ET8 278 aa8.05□□□□□ -1.12
APP-213ENST00000464867 ANKRD16Q6P6B7 361 aa8.05□□□□□ -1.12
APP-213ENST00000464867 CASP12Q6UXS9 341 aa8.05□□□□□ -1.12
APP-213ENST00000464867 ADGRG3Q86Y34 549 aa8.05□□□□□ -1.12
APP-213ENST00000464867 CDK20Q8IZL9 346 aa8.05□□□□□ -1.12
APP-213ENST00000464867 NAT8LQ8N9F0 302 aa8.05□□□□□ -1.12
APP-213ENST00000464867 OR4C3Q8NH37 302 aa8.05□□□□□ -1.12
APP-213ENST00000464867 GPR151Q8TDV0 419 aa8.05□□□□□ -1.12
APP-213ENST00000464867 PPP1R14AQ96A00 147 aa8.05□□□□□ -1.12
APP-213ENST00000464867 FRG2BQ96QU4 278 aa8.05□□□□□ -1.12
APP-213ENST00000464867 ALG9Q9H6U8 611 aa8.05□□□□□ -1.12
APP-213ENST00000464867 IPPKQ9H8X2 491 aa8.05□□□□□ -1.12
APP-213ENST00000464867 TCF7L1Q9HCS4 588 aa8.05□□□□□ -1.12
APP-213ENST00000464867 SLC35C2Q9NQQ7 365 aa8.05□□□□□ -1.12
APP-213ENST00000464867 UBQLN4Q9NRR5 601 aa8.05□□□□□ -1.12
APP-213ENST00000464867 DDX18Q9NVP1 670 aaKnown RBP8.05□□□□□ -1.12
APP-213ENST00000464867 NSMCE4AQ9NXX6 385 aa8.05□□□□□ -1.12
APP-213ENST00000464867 SLAMF8Q9P0V8 285 aa8.05□□□□□ -1.12
APP-213ENST00000464867 ZNF69Q9UC07 566 aa8.05□□□□□ -1.12
APP-213ENST00000464867 OPN4Q9UHM6 478 aa8.05□□□□□ -1.12
APP-213ENST00000464867 NFU1Q9UMS0 254 aa8.05□□□□□ -1.12
APP-213ENST00000464867 SLC12A4Q9UP95 1085 aa8.05□□□□□ -1.12
APP-213ENST00000464867 RNF11Q9Y3C5 154 aa8.05□□□□□ -1.12
APP-213ENST00000464867 PSAT1Q9Y617 370 aa8.05□□□□□ -1.12
APP-213ENST00000464867 COL7A1Q02388 2944 aa8.05□□□□□ -1.12
APP-213ENST00000464867 C5orf63A6NC05 138 aa8.04□□□□□ -1.12
APP-213ENST00000464867 OR6C65A6NJZ3 312 aa8.04□□□□□ -1.12
APP-213ENST00000464867 SULT2B1O00204 365 aa8.04□□□□□ -1.12
APP-213ENST00000464867 PLXNB1O43157 2135 aa8.04□□□□□ -1.12
APP-213ENST00000464867 SYNGR3O43761 229 aa8.04□□□□□ -1.12
APP-213ENST00000464867 SEC14L2O76054 403 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms