RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 LGALS2P05162 132 aa2.93□□□□□ -1.94
CLK1-208ENST00000464454 DBTP11182 482 aaKnown RBP2.93□□□□□ -1.94
CLK1-208ENST00000464454 GCAP28676 217 aa2.93□□□□□ -1.94
CLK1-208ENST00000464454 LEPP41159 167 aa2.93□□□□□ -1.94
CLK1-208ENST00000464454 KLRC3Q07444 240 aa2.93□□□□□ -1.94
CLK1-208ENST00000464454 FGL1Q08830 312 aa2.93□□□□□ -1.94
CLK1-208ENST00000464454 IL24Q13007 206 aa2.93□□□□□ -1.94
CLK1-208ENST00000464454 ARL6IP1Q15041 203 aa2.93□□□□□ -1.94
CLK1-208ENST00000464454 EOGTQ5NDL2 527 aa2.93□□□□□ -1.94
CLK1-208ENST00000464454 CENPPQ6IPU0 288 aa2.93□□□□□ -1.94
CLK1-208ENST00000464454 ZSCAN25Q6NSZ9 544 aa2.93□□□□□ -1.94
CLK1-208ENST00000464454 Q6ZPB1 254 aaPredicted RBP2.93□□□□□ -1.94
CLK1-208ENST00000464454 GDPD3Q7L5L3 318 aa2.93□□□□□ -1.94
CLK1-208ENST00000464454 ZCCHC7Q8N3Z6 543 aaKnown RBP2.93□□□□□ -1.94
CLK1-208ENST00000464454 Q8N7P7 452 aa2.93□□□□□ -1.94
CLK1-208ENST00000464454 OR56B4Q8NH76 319 aa2.93□□□□□ -1.94
CLK1-208ENST00000464454 HTR3CQ8WXA8 447 aa2.93□□□□□ -1.94
CLK1-208ENST00000464454 RAPGEF5Q92565 580 aa2.93□□□□□ -1.94
CLK1-208ENST00000464454 MARC2Q969Z3 335 aa2.93□□□□□ -1.94
CLK1-208ENST00000464454 COQ2Q96H96 371 aa2.93□□□□□ -1.94
CLK1-208ENST00000464454 RBM14Q96PK6 669 aaKnown RBP2.93□□□□□ -1.94
CLK1-208ENST00000464454 CCNL2Q96S94 520 aaPredicted RBP2.93□□□□□ -1.94
CLK1-208ENST00000464454 GAL3ST1Q99999 423 aa2.93□□□□□ -1.94
CLK1-208ENST00000464454 TMEM43Q9BTV4 400 aa2.93□□□□□ -1.94
CLK1-208ENST00000464454 RAB34Q9BZG1 259 aa2.93□□□□□ -1.94
CLK1-208ENST00000464454 POPDC2Q9HBU9 364 aa2.93□□□□□ -1.94
CLK1-208ENST00000464454 SMOXQ9NWM0 555 aa2.93□□□□□ -1.94
CLK1-208ENST00000464454 MARCH5Q9NX47 278 aa2.93□□□□□ -1.94
CLK1-208ENST00000464454 CD274Q9NZQ7 290 aa2.93□□□□□ -1.94
CLK1-208ENST00000464454 PRPF19Q9UMS4 504 aaKnown RBP2.93□□□□□ -1.94
CLK1-208ENST00000464454 ABCG2Q9UNQ0 655 aa2.93□□□□□ -1.94
CLK1-208ENST00000464454 POLDIP2Q9Y2S7 368 aa2.93□□□□□ -1.94
CLK1-208ENST00000464454 MEMO1Q9Y316 297 aa2.93□□□□□ -1.94
CLK1-208ENST00000464454 TIMM10BQ9Y5J6 103 aa2.93□□□□□ -1.94
CLK1-208ENST00000464454 ATP10AO60312 1499 aa2.92□□□□□ -1.94
CLK1-208ENST00000464454 CHD4Q14839 1912 aa2.92□□□□□ -1.94
CLK1-208ENST00000464454 RPAP1Q9BWH6 1393 aaPredicted RBP2.92□□□□□ -1.94
CLK1-208ENST00000464454 VSTM2BA6NLU5 285 aa2.92□□□□□ -1.94
CLK1-208ENST00000464454 K7N7A8 449 aa2.92□□□□□ -1.94
CLK1-208ENST00000464454 HDAC3O15379 428 aa2.92□□□□□ -1.94
CLK1-208ENST00000464454 ZNF208O43345 1280 aa2.92□□□□□ -1.94
CLK1-208ENST00000464454 RIPK2O43353 540 aa2.92□□□□□ -1.94
CLK1-208ENST00000464454 PFKFB2O60825 505 aa2.92□□□□□ -1.94
CLK1-208ENST00000464454 AP2A1O95782 977 aa2.92□□□□□ -1.94
CLK1-208ENST00000464454 CAPN1P07384 714 aa2.92□□□□□ -1.94
CLK1-208ENST00000464454 COX5AP20674 150 aa2.92□□□□□ -1.94
CLK1-208ENST00000464454 AQP1P29972 269 aa2.92□□□□□ -1.94
CLK1-208ENST00000464454 RPL13AP40429 203 aaKnown RBP2.92□□□□□ -1.94
CLK1-208ENST00000464454 CASP4P49662 377 aa2.92□□□□□ -1.94
CLK1-208ENST00000464454 CEBPDP49716 269 aaPredicted RBP2.92□□□□□ -1.94
CLK1-208ENST00000464454 EFNB2P52799 333 aa2.92□□□□□ -1.94
CLK1-208ENST00000464454 AIF1P55008 147 aa2.92□□□□□ -1.94
CLK1-208ENST00000464454 STX17P56962 302 aa2.92□□□□□ -1.94
CLK1-208ENST00000464454 UBE2HP62256 183 aa2.92□□□□□ -1.94
CLK1-208ENST00000464454 EGFEM1PQ0D2K5 195 aa2.92□□□□□ -1.94
CLK1-208ENST00000464454 OR4F3Q6IEY1 312 aa2.92□□□□□ -1.94
CLK1-208ENST00000464454 KDELC1Q6UW63 502 aa2.92□□□□□ -1.94
CLK1-208ENST00000464454 UNQ9370/PRO34162Q6UXP9 181 aa2.92□□□□□ -1.94
CLK1-208ENST00000464454 SCARA5Q6ZMJ2 495 aa2.92□□□□□ -1.94
CLK1-208ENST00000464454 CCDC65Q8IXS2 484 aa2.92□□□□□ -1.94
CLK1-208ENST00000464454 TMEM252Q8N6L7 170 aa2.92□□□□□ -1.94
CLK1-208ENST00000464454 ALLCQ8N6M5 410 aa2.92□□□□□ -1.94
CLK1-208ENST00000464454 CATSPER1Q8NEC5 780 aa2.92□□□□□ -1.94
CLK1-208ENST00000464454 BBS1Q8NFJ9 593 aa2.92□□□□□ -1.94
CLK1-208ENST00000464454 OR2AP1Q8NGE2 309 aa2.92□□□□□ -1.94
CLK1-208ENST00000464454 ZNF564Q8TBZ8 553 aaPredicted RBP2.92□□□□□ -1.94
CLK1-208ENST00000464454 ST8SIA1Q92185 356 aa2.92□□□□□ -1.94
CLK1-208ENST00000464454 SLC41A3Q96GZ6 507 aa2.92□□□□□ -1.94
CLK1-208ENST00000464454 SEC22AQ96IW7 307 aa2.92□□□□□ -1.94
CLK1-208ENST00000464454 PGLYRP4Q96LB8 373 aa2.92□□□□□ -1.94
CLK1-208ENST00000464454 ZIM3Q96PE6 472 aa2.92□□□□□ -1.94
CLK1-208ENST00000464454 PSKH2Q96QS6 385 aa2.92□□□□□ -1.94
CLK1-208ENST00000464454 ANAPC11Q9NYG5 84 aa2.92□□□□□ -1.94
CLK1-208ENST00000464454 IL17CQ9P0M4 197 aa2.92□□□□□ -1.94
CLK1-208ENST00000464454 CDH9Q9ULB4 789 aa2.92□□□□□ -1.94
CLK1-208ENST00000464454 CLEC4AQ9UMR7 237 aa2.92□□□□□ -1.94
CLK1-208ENST00000464454 COPS3Q9UNS2 423 aa2.92□□□□□ -1.94
CLK1-208ENST00000464454 IFT52Q9Y366 437 aa2.92□□□□□ -1.94
CLK1-208ENST00000464454 OBSCNQ5VST9 7968 aa2.91□□□□□ -1.94
CLK1-208ENST00000464454 A0A1B0GUS0 222 aa2.91□□□□□ -1.94
CLK1-208ENST00000464454 HELTA6NFD8 242 aa2.91□□□□□ -1.94
CLK1-208ENST00000464454 IDSB3KWA1 339 aa2.91□□□□□ -1.94
CLK1-208ENST00000464454 POLR2DO15514 142 aaKnown RBP2.91□□□□□ -1.94
CLK1-208ENST00000464454 BBOX1O75936 387 aa2.91□□□□□ -1.94
CLK1-208ENST00000464454 SNAPINO95295 136 aa2.91□□□□□ -1.94
CLK1-208ENST00000464454 IGHV3-48P01763 117 aa2.91□□□□□ -1.94
CLK1-208ENST00000464454 GABRR1P24046 479 aa2.91□□□□□ -1.94
CLK1-208ENST00000464454 PTGDSP41222 190 aa2.91□□□□□ -1.94
CLK1-208ENST00000464454 MAP3K8P41279 467 aa2.91□□□□□ -1.94
CLK1-208ENST00000464454 KRTAP12-2P59991 146 aa2.91□□□□□ -1.94
CLK1-208ENST00000464454 NDPQ00604 133 aa2.91□□□□□ -1.94
CLK1-208ENST00000464454 ORC2Q13416 577 aaPredicted RBP2.91□□□□□ -1.94
CLK1-208ENST00000464454 RIPK1Q13546 671 aa2.91□□□□□ -1.94
CLK1-208ENST00000464454 ZNF79Q15937 498 aa2.91□□□□□ -1.94
CLK1-208ENST00000464454 SFT2D3Q587I9 215 aa2.91□□□□□ -1.94
CLK1-208ENST00000464454 LCE3EQ5T5B0 92 aa2.91□□□□□ -1.94
CLK1-208ENST00000464454 ZNF544Q6NX49 715 aa2.91□□□□□ -1.94
CLK1-208ENST00000464454 VRK2Q86Y07 508 aa2.91□□□□□ -1.94
CLK1-208ENST00000464454 ZNF679Q8IYX0 411 aa2.91□□□□□ -1.94
CLK1-208ENST00000464454 EIF1ADQ8N9N8 165 aaKnown RBP2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms