RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 USP22Q9UPT9 525 aa15.29■□□□□ 0.04
VPS52-215ENST00000464425 ZNF443Q9Y2A4 671 aaPredicted RBP15.29■□□□□ 0.04
VPS52-215ENST00000464425 ZNF175Q9Y473 711 aa15.29■□□□□ 0.04
VPS52-215ENST00000464425 CACNA1DQ01668 2161 aa15.28■□□□□ 0.04
VPS52-215ENST00000464425 MED12LQ86YW9 2145 aa15.28■□□□□ 0.04
VPS52-215ENST00000464425 UNC79Q9P2D8 2635 aa15.28■□□□□ 0.04
VPS52-215ENST00000464425 EEF1E1-BLOC1S5C9J1V9 151 aa15.28■□□□□ 0.04
VPS52-215ENST00000464425 M0QX08 132 aa15.28■□□□□ 0.04
VPS52-215ENST00000464425 EEF1E1O43324 174 aaKnown RBP15.28■□□□□ 0.04
VPS52-215ENST00000464425 AQP8O94778 261 aa15.28■□□□□ 0.04
VPS52-215ENST00000464425 MFN2O95140 757 aa15.28■□□□□ 0.04
VPS52-215ENST00000464425 IL18BPO95998 194 aa15.28■□□□□ 0.04
VPS52-215ENST00000464425 GKN3PP0CG01 181 aa15.28■□□□□ 0.04
VPS52-215ENST00000464425 PRKAR1BP31321 381 aa15.28■□□□□ 0.04
VPS52-215ENST00000464425 UQCRC1P31930 480 aa15.28■□□□□ 0.04
VPS52-215ENST00000464425 CARD18P57730 90 aa15.28■□□□□ 0.04
VPS52-215ENST00000464425 EEF1A1P68104 462 aaKnown RBP15.28■□□□□ 0.04
VPS52-215ENST00000464425 SNTB1Q13884 538 aaKnown RBP15.28■□□□□ 0.04
VPS52-215ENST00000464425 FXNQ16595 210 aa15.28■□□□□ 0.04
VPS52-215ENST00000464425 ZNF311Q5JNZ3 666 aa15.28■□□□□ 0.04
VPS52-215ENST00000464425 PLEKHM3Q6ZWE6 761 aa15.28■□□□□ 0.04
VPS52-215ENST00000464425 ZFP3Q96NJ6 502 aa15.28■□□□□ 0.04
VPS52-215ENST00000464425 SPOCK3Q9BQ16 436 aa15.28■□□□□ 0.04
VPS52-215ENST00000464425 BTBD10Q9BSF8 475 aa15.28■□□□□ 0.04
VPS52-215ENST00000464425 ENKD1Q9H0I2 346 aa15.28■□□□□ 0.04
VPS52-215ENST00000464425 PRPF19Q9UMS4 504 aaKnown RBP15.28■□□□□ 0.04
VPS52-215ENST00000464425 A0A1W2PNV4 684 aa15.27■□□□□ 0.04
VPS52-215ENST00000464425 CDHR4A6H8M9 788 aa15.27■□□□□ 0.04
VPS52-215ENST00000464425 GJE1A6NN92 205 aa15.27■□□□□ 0.04
VPS52-215ENST00000464425 ETV2O00321 342 aaPredicted RBP15.27■□□□□ 0.04
VPS52-215ENST00000464425 GYG2O15488 501 aa15.27■□□□□ 0.04
VPS52-215ENST00000464425 SYNGR4O95473 234 aa15.27■□□□□ 0.04
VPS52-215ENST00000464425 IFNA14P01570 189 aa15.27■□□□□ 0.04
VPS52-215ENST00000464425 AQP1P29972 269 aa15.27■□□□□ 0.04
VPS52-215ENST00000464425 SELENBP1Q13228 472 aa15.27■□□□□ 0.04
VPS52-215ENST00000464425 DNAL1Q4LDG9 190 aa15.27■□□□□ 0.04
VPS52-215ENST00000464425 PDSS1Q5T2R2 415 aa15.27■□□□□ 0.04
VPS52-215ENST00000464425 OR2A2Q6IF42 318 aa15.27■□□□□ 0.04
VPS52-215ENST00000464425 DHRS4L2Q6PKH6 230 aa15.27■□□□□ 0.04
VPS52-215ENST00000464425 LSRQ86X29 649 aaPredicted RBP15.27■□□□□ 0.04
VPS52-215ENST00000464425 ARMC8Q8IUR7 673 aa15.27■□□□□ 0.04
VPS52-215ENST00000464425 CLIP4Q8N3C7 705 aa15.27■□□□□ 0.04
VPS52-215ENST00000464425 CNEP1R1Q8N9A8 125 aa15.27■□□□□ 0.04
VPS52-215ENST00000464425 RASSF5Q8WWW0 418 aa15.27■□□□□ 0.04
VPS52-215ENST00000464425 SLC35B4Q969S0 331 aa15.27■□□□□ 0.04
VPS52-215ENST00000464425 SFXN3Q9BWM7 321 aa15.27■□□□□ 0.04
VPS52-215ENST00000464425 EVA1AQ9H8M9 152 aa15.27■□□□□ 0.04
VPS52-215ENST00000464425 RNF122Q9H9V4 155 aa15.27■□□□□ 0.04
VPS52-215ENST00000464425 CELSR2Q9HCU4 2923 aa15.27■□□□□ 0.03
VPS52-215ENST00000464425 HCFC1P51610 2035 aa15.26■□□□□ 0.03
VPS52-215ENST00000464425 A0A1W2PNR3 127 aa15.26■□□□□ 0.03
VPS52-215ENST00000464425 CFAP73A6NFT4 308 aa15.26■□□□□ 0.03
VPS52-215ENST00000464425 SYT5O00445 386 aa15.26■□□□□ 0.03
VPS52-215ENST00000464425 GSTA4O15217 222 aa15.26■□□□□ 0.03
VPS52-215ENST00000464425 TNFSF13O75888 250 aa15.26■□□□□ 0.03
VPS52-215ENST00000464425 C8BP07358 591 aa15.26■□□□□ 0.03
VPS52-215ENST00000464425 PRF1P14222 555 aa15.26■□□□□ 0.03
VPS52-215ENST00000464425 CCNA2P20248 432 aa15.26■□□□□ 0.03
VPS52-215ENST00000464425 KDELR2P33947 212 aa15.26■□□□□ 0.03
VPS52-215ENST00000464425 ASCL1P50553 236 aa15.26■□□□□ 0.03
VPS52-215ENST00000464425 DLX5P56178 289 aa15.26■□□□□ 0.03
VPS52-215ENST00000464425 SIRPAP78324 504 aa15.26■□□□□ 0.03
VPS52-215ENST00000464425 GABPB1Q06547 395 aaPredicted RBP15.26■□□□□ 0.03
VPS52-215ENST00000464425 CEACAM7Q14002 265 aa15.26■□□□□ 0.03
VPS52-215ENST00000464425 LUZP2Q86TE4 346 aa15.26■□□□□ 0.03
VPS52-215ENST00000464425 MCEMP1Q8IX19 187 aa15.26■□□□□ 0.03
VPS52-215ENST00000464425 ZNF440Q8IYI8 595 aa15.26■□□□□ 0.03
VPS52-215ENST00000464425 ROBO4Q8WZ75 1007 aa15.26■□□□□ 0.03
VPS52-215ENST00000464425 RSPO3Q9BXY4 272 aaPredicted RBP15.26■□□□□ 0.03
VPS52-215ENST00000464425 SRXN1Q9BYN0 137 aa15.26■□□□□ 0.03
VPS52-215ENST00000464425 CTPS2Q9NRF8 586 aa15.26■□□□□ 0.03
VPS52-215ENST00000464425 SERINC1Q9NRX5 453 aa15.26■□□□□ 0.03
VPS52-215ENST00000464425 PAQR5Q9NXK6 330 aaPredicted RBP15.26■□□□□ 0.03
VPS52-215ENST00000464425 GMPR2Q9P2T1 348 aaKnown RBP15.26■□□□□ 0.03
VPS52-215ENST00000464425 MCTS1Q9ULC4 181 aaKnown RBP15.26■□□□□ 0.03
VPS52-215ENST00000464425 CLEC4AQ9UMR7 237 aa15.26■□□□□ 0.03
VPS52-215ENST00000464425 CHST2Q9Y4C5 530 aa15.26■□□□□ 0.03
VPS52-215ENST00000464425 NOTCH2Q04721 2471 aa15.25■□□□□ 0.03
VPS52-215ENST00000464425 CXCR6O00574 342 aa15.25■□□□□ 0.03
VPS52-215ENST00000464425 IGFBP2P18065 325 aa15.25■□□□□ 0.03
VPS52-215ENST00000464425 GGT1P19440 569 aa15.25■□□□□ 0.03
VPS52-215ENST00000464425 SLC7A1P30825 629 aa15.25■□□□□ 0.03
VPS52-215ENST00000464425 APOBEC1P41238 236 aaKnown RBP15.25■□□□□ 0.03
VPS52-215ENST00000464425 KIR2DL2P43627 348 aaPredicted RBP15.25■□□□□ 0.03
VPS52-215ENST00000464425 CRYBA2P53672 197 aa15.25■□□□□ 0.03
VPS52-215ENST00000464425 DMTNQ08495 405 aa15.25■□□□□ 0.03
VPS52-215ENST00000464425 EPS8Q12929 822 aa15.25■□□□□ 0.03
VPS52-215ENST00000464425 VWA1Q6PCB0 445 aa15.25■□□□□ 0.03
VPS52-215ENST00000464425 CCDC121Q6ZUS5 278 aa15.25■□□□□ 0.03
VPS52-215ENST00000464425 GRINAQ7Z429 371 aa15.25■□□□□ 0.03
VPS52-215ENST00000464425 RNF148Q8N7C7 305 aa15.25■□□□□ 0.03
VPS52-215ENST00000464425 ACBD4Q8NC06 268 aa15.25■□□□□ 0.03
VPS52-215ENST00000464425 TAMM41Q96BW9 452 aa15.25■□□□□ 0.03
VPS52-215ENST00000464425 STARD4Q96DR4 205 aa15.25■□□□□ 0.03
VPS52-215ENST00000464425 OR5B2Q96R09 309 aa15.25■□□□□ 0.03
VPS52-215ENST00000464425 COQ10BQ9H8M1 238 aa15.25■□□□□ 0.03
VPS52-215ENST00000464425 GORASP2Q9H8Y8 452 aa15.25■□□□□ 0.03
VPS52-215ENST00000464425 TIGARQ9NQ88 270 aa15.25■□□□□ 0.03
VPS52-215ENST00000464425 FRS3O43559 492 aa15.24■□□□□ 0.03
VPS52-215ENST00000464425 GMNNO75496 209 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms