RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 PRSS50Q9UI38 385 aa12.71□□□□□ -0.37
SNRNP40-203ENST00000463988 LAMP3Q9UQV4 416 aa12.71□□□□□ -0.37
SNRNP40-203ENST00000463988 TRAPPC4Q9Y296 219 aa12.71□□□□□ -0.37
SNRNP40-203ENST00000463988 PLCE1Q9P212 2302 aa12.7□□□□□ -0.38
SNRNP40-203ENST00000463988 GOLGA8QA0A0J9YX86 632 aa12.7□□□□□ -0.38
SNRNP40-203ENST00000463988 GOLGA8OA6NCC3 632 aa12.7□□□□□ -0.38
SNRNP40-203ENST00000463988 DPRXA6NFQ7 191 aa12.7□□□□□ -0.38
SNRNP40-203ENST00000463988 AGAP5A6NIR3 686 aa12.7□□□□□ -0.38
SNRNP40-203ENST00000463988 TRPC5OSA6NMA1 111 aa12.7□□□□□ -0.38
SNRNP40-203ENST00000463988 C9JVG2 144 aa12.7□□□□□ -0.38
SNRNP40-203ENST00000463988 GOLGA8NF8WBI6 632 aa12.7□□□□□ -0.38
SNRNP40-203ENST00000463988 FAAHO00519 579 aa12.7□□□□□ -0.38
SNRNP40-203ENST00000463988 SDHDO14521 159 aa12.7□□□□□ -0.38
SNRNP40-203ENST00000463988 GPR171O14626 319 aa12.7□□□□□ -0.38
SNRNP40-203ENST00000463988 HDAC3O15379 428 aa12.7□□□□□ -0.38
SNRNP40-203ENST00000463988 CLOCKO15516 846 aa12.7□□□□□ -0.38
SNRNP40-203ENST00000463988 ZNF500O60304 480 aaPredicted RBP12.7□□□□□ -0.38
SNRNP40-203ENST00000463988 PGM3O95394 542 aa12.7□□□□□ -0.38
SNRNP40-203ENST00000463988 PGRP06401 933 aa12.7□□□□□ -0.38
SNRNP40-203ENST00000463988 ALDOCP09972 364 aaKnown RBP12.7□□□□□ -0.38
SNRNP40-203ENST00000463988 DANCRP0C864 163 aa12.7□□□□□ -0.38
SNRNP40-203ENST00000463988 TFPIP10646 304 aa12.7□□□□□ -0.38
SNRNP40-203ENST00000463988 EDNRAP25101 427 aa12.7□□□□□ -0.38
SNRNP40-203ENST00000463988 RYKP34925 604 aa12.7□□□□□ -0.38
SNRNP40-203ENST00000463988 MAP2K6P52564 334 aa12.7□□□□□ -0.38
SNRNP40-203ENST00000463988 SLC16A1P53985 500 aa12.7□□□□□ -0.38
SNRNP40-203ENST00000463988 UFM1P61960 85 aa12.7□□□□□ -0.38
SNRNP40-203ENST00000463988 PLAURQ03405 335 aa12.7□□□□□ -0.38
SNRNP40-203ENST00000463988 BSPH1Q075Z2 132 aa12.7□□□□□ -0.38
SNRNP40-203ENST00000463988 PPA1Q15181 289 aa12.7□□□□□ -0.38
SNRNP40-203ENST00000463988 HHATQ5VTY9 493 aa12.7□□□□□ -0.38
SNRNP40-203ENST00000463988 FBXW9Q5XUX1 488 aa12.7□□□□□ -0.38
SNRNP40-203ENST00000463988 LRRC74BQ6ZQY2 392 aa12.7□□□□□ -0.38
SNRNP40-203ENST00000463988 RNF130Q86XS8 419 aa12.7□□□□□ -0.38
SNRNP40-203ENST00000463988 ADGRG3Q86Y34 549 aa12.7□□□□□ -0.38
SNRNP40-203ENST00000463988 GLB1L3Q8NCI6 653 aaPredicted RBP12.7□□□□□ -0.38
SNRNP40-203ENST00000463988 PIGXQ8TBF5 258 aa12.7□□□□□ -0.38
SNRNP40-203ENST00000463988 SMAP2Q8WU79 429 aaPredicted RBP12.7□□□□□ -0.38
SNRNP40-203ENST00000463988 ZNF775Q96BV0 537 aaPredicted RBP12.7□□□□□ -0.38
SNRNP40-203ENST00000463988 MUCL1Q96DR8 90 aa12.7□□□□□ -0.38
SNRNP40-203ENST00000463988 TRMT61AQ96FX7 289 aaKnown RBP12.7□□□□□ -0.38
SNRNP40-203ENST00000463988 OR52E6Q96RD3 313 aa12.7□□□□□ -0.38
SNRNP40-203ENST00000463988 PANX1Q96RD7 426 aa12.7□□□□□ -0.38
SNRNP40-203ENST00000463988 ZBTB18Q99592 522 aa12.7□□□□□ -0.38
SNRNP40-203ENST00000463988 TRIM2Q9C040 744 aa12.7□□□□□ -0.38
SNRNP40-203ENST00000463988 SLC38A1Q9H2H9 487 aa12.7□□□□□ -0.38
SNRNP40-203ENST00000463988 THAP1Q9NVV9 213 aa12.7□□□□□ -0.38
SNRNP40-203ENST00000463988 GPR45Q9Y5Y3 372 aa12.7□□□□□ -0.38
SNRNP40-203ENST00000463988 OR5H1A6NKK0 313 aa12.69□□□□□ -0.38
SNRNP40-203ENST00000463988 ZNF716A6NP11 495 aa12.69□□□□□ -0.38
SNRNP40-203ENST00000463988 SLCO1B7G3V0H7 640 aa12.69□□□□□ -0.38
SNRNP40-203ENST00000463988 SMAD7O15105 426 aaKnown RBP12.69□□□□□ -0.38
SNRNP40-203ENST00000463988 ZNF208O43345 1280 aa12.69□□□□□ -0.38
SNRNP40-203ENST00000463988 SNNO75324 88 aaPredicted RBP12.69□□□□□ -0.38
SNRNP40-203ENST00000463988 LYZL6O75951 148 aa12.69□□□□□ -0.38
SNRNP40-203ENST00000463988 SOD3P08294 240 aa12.69□□□□□ -0.38
SNRNP40-203ENST00000463988 GGT1P19440 569 aa12.69□□□□□ -0.38
SNRNP40-203ENST00000463988 IGHV1-2P23083 117 aa12.69□□□□□ -0.38
SNRNP40-203ENST00000463988 IL12AP29459 219 aa12.69□□□□□ -0.38
SNRNP40-203ENST00000463988 IDH2P48735 452 aaKnown RBP12.69□□□□□ -0.38
SNRNP40-203ENST00000463988 SLC18A1P54219 525 aa12.69□□□□□ -0.38
SNRNP40-203ENST00000463988 H3F3AP84243 136 aa12.69□□□□□ -0.38
SNRNP40-203ENST00000463988 GNA13Q14344 377 aa12.69□□□□□ -0.38
SNRNP40-203ENST00000463988 SYPL1Q16563 259 aa12.69□□□□□ -0.38
SNRNP40-203ENST00000463988 ZNF433Q8N7K0 673 aaPredicted RBP12.69□□□□□ -0.38
SNRNP40-203ENST00000463988 ANKFN1Q8N957 763 aa12.69□□□□□ -0.38
SNRNP40-203ENST00000463988 CNOT9Q92600 299 aaKnown RBP12.69□□□□□ -0.38
SNRNP40-203ENST00000463988 APH1AQ96BI3 265 aa12.69□□□□□ -0.38
SNRNP40-203ENST00000463988 RADILQ96JH8 1075 aa12.69□□□□□ -0.38
SNRNP40-203ENST00000463988 ARL5BQ96KC2 179 aa12.69□□□□□ -0.38
SNRNP40-203ENST00000463988 PAIP2Q9BPZ3 127 aaKnown RBP12.69□□□□□ -0.38
SNRNP40-203ENST00000463988 GRIP2Q9C0E4 1043 aa12.69□□□□□ -0.38
SNRNP40-203ENST00000463988 TMEM181Q9P2C4 612 aa12.69□□□□□ -0.38
SNRNP40-203ENST00000463988 NOSIPQ9Y314 301 aaKnown RBP12.69□□□□□ -0.38
SNRNP40-203ENST00000463988 CLDN24A6NM45 220 aa12.68□□□□□ -0.38
SNRNP40-203ENST00000463988 EIF1BO60739 113 aaKnown RBP12.68□□□□□ -0.38
SNRNP40-203ENST00000463988 ADAM11O75078 769 aa12.68□□□□□ -0.38
SNRNP40-203ENST00000463988 KRT75O95678 551 aa12.68□□□□□ -0.38
SNRNP40-203ENST00000463988 IL6P05231 212 aa12.68□□□□□ -0.38
SNRNP40-203ENST00000463988 DBIP07108 87 aaKnown RBP12.68□□□□□ -0.38
SNRNP40-203ENST00000463988 THBS1P07996 1170 aa12.68□□□□□ -0.38
SNRNP40-203ENST00000463988 CHRM4P08173 479 aa12.68□□□□□ -0.38
SNRNP40-203ENST00000463988 RPS4Y1P22090 263 aaKnown RBP12.68□□□□□ -0.38
SNRNP40-203ENST00000463988 EPHA3P29320 983 aa12.68□□□□□ -0.38
SNRNP40-203ENST00000463988 SLC1A3P43003 542 aa12.68□□□□□ -0.38
SNRNP40-203ENST00000463988 POLR2HP52434 150 aaKnown RBP12.68□□□□□ -0.38
SNRNP40-203ENST00000463988 NME5P56597 212 aa12.68□□□□□ -0.38
SNRNP40-203ENST00000463988 WDR4P57081 412 aaKnown RBP12.68□□□□□ -0.38
SNRNP40-203ENST00000463988 STK11Q15831 433 aa12.68□□□□□ -0.38
SNRNP40-203ENST00000463988 ZNF621Q6ZSS3 439 aa12.68□□□□□ -0.38
SNRNP40-203ENST00000463988 INPP5KQ9BT40 448 aa12.68□□□□□ -0.38
SNRNP40-203ENST00000463988 OR11A1Q9GZK7 315 aa12.68□□□□□ -0.38
SNRNP40-203ENST00000463988 MALT1Q9UDY8 824 aa12.68□□□□□ -0.38
SNRNP40-203ENST00000463988 SONP18583 2426 aaKnown RBP12.67□□□□□ -0.38
SNRNP40-203ENST00000463988 TMED7-TICAM2A0A0A6YYA0 188 aa12.67□□□□□ -0.38
SNRNP40-203ENST00000463988 A0A1W2PP18 115 aa12.67□□□□□ -0.38
SNRNP40-203ENST00000463988 TMEM120BA0PK00 339 aa12.67□□□□□ -0.38
SNRNP40-203ENST00000463988 MRPL33O75394 65 aaKnown RBP12.67□□□□□ -0.38
SNRNP40-203ENST00000463988 C1QCP02747 245 aa12.67□□□□□ -0.38
SNRNP40-203ENST00000463988 IDO1P14902 403 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms