RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 HSPB3Q12988 150 aa6.67□□□□□ -1.34
SMC3-202ENST00000462899 CCNIQ14094 377 aa6.67□□□□□ -1.34
SMC3-202ENST00000462899 MLC1Q15049 377 aa6.67□□□□□ -1.34
SMC3-202ENST00000462899 QPRTQ15274 297 aa6.67□□□□□ -1.34
SMC3-202ENST00000462899 UNC50Q53HI1 259 aa6.67□□□□□ -1.34
SMC3-202ENST00000462899 ZNF385BQ569K4 471 aa6.67□□□□□ -1.34
SMC3-202ENST00000462899 ZNF678Q5SXM1 525 aa6.67□□□□□ -1.34
SMC3-202ENST00000462899 ZCCHC12Q6PEW1 402 aa6.67□□□□□ -1.34
SMC3-202ENST00000462899 IKBIPQ70UQ0 350 aa6.67□□□□□ -1.34
SMC3-202ENST00000462899 MTDHQ86UE4 582 aaKnown RBP6.67□□□□□ -1.34
SMC3-202ENST00000462899 GLCCI1Q86VQ1 547 aa6.67□□□□□ -1.34
SMC3-202ENST00000462899 SVOPLQ8N434 492 aa6.67□□□□□ -1.34
SMC3-202ENST00000462899 PHOSPHO1Q8TCT1 267 aa6.67□□□□□ -1.34
SMC3-202ENST00000462899 NEU4Q8WWR8 484 aaPredicted RBP6.67□□□□□ -1.34
SMC3-202ENST00000462899 C16orf58Q96GQ5 468 aa6.67□□□□□ -1.34
SMC3-202ENST00000462899 OR5B2Q96R09 309 aa6.67□□□□□ -1.34
SMC3-202ENST00000462899 DOK1Q99704 481 aa6.67□□□□□ -1.34
SMC3-202ENST00000462899 VRK1Q99986 396 aaPredicted RBP6.67□□□□□ -1.34
SMC3-202ENST00000462899 KATNB1Q9BVA0 655 aa6.67□□□□□ -1.34
SMC3-202ENST00000462899 MIEF1Q9NQG6 463 aa6.67□□□□□ -1.34
SMC3-202ENST00000462899 G6PC2Q9NQR9 355 aa6.67□□□□□ -1.34
SMC3-202ENST00000462899 DUSP22Q9NRW4 184 aa6.67□□□□□ -1.34
SMC3-202ENST00000462899 SLC7A10Q9NS82 523 aa6.67□□□□□ -1.34
SMC3-202ENST00000462899 SIRT3Q9NTG7 399 aaPredicted RBP6.67□□□□□ -1.34
SMC3-202ENST00000462899 HIF1ANQ9NWT6 349 aa6.67□□□□□ -1.34
SMC3-202ENST00000462899 GIN1Q9NXP7 522 aa6.67□□□□□ -1.34
SMC3-202ENST00000462899 USP22Q9UPT9 525 aa6.67□□□□□ -1.34
SMC3-202ENST00000462899 WBP11Q9Y2W2 641 aaKnown RBP6.67□□□□□ -1.34
SMC3-202ENST00000462899 NOSIPQ9Y314 301 aaKnown RBP6.67□□□□□ -1.34
SMC3-202ENST00000462899 TANC2Q9HCD6 1990 aa6.66□□□□□ -1.34
SMC3-202ENST00000462899 COL7A1Q02388 2944 aa6.66□□□□□ -1.34
SMC3-202ENST00000462899 TMEM238LA0A1B0GVL6 79 aa6.66□□□□□ -1.34
SMC3-202ENST00000462899 CCDC188H7C350 402 aa6.66□□□□□ -1.34
SMC3-202ENST00000462899 DNPH1O43598 174 aa6.66□□□□□ -1.34
SMC3-202ENST00000462899 SMIM24O75264 130 aa6.66□□□□□ -1.34
SMC3-202ENST00000462899 URI1O94763 535 aaPredicted RBP6.66□□□□□ -1.34
SMC3-202ENST00000462899 PMS2P2O95744 297 aa6.66□□□□□ -1.34
SMC3-202ENST00000462899 FSHBP01225 129 aa6.66□□□□□ -1.34
SMC3-202ENST00000462899 IGLV1-44P01699 117 aa6.66□□□□□ -1.34
SMC3-202ENST00000462899 MSMBP08118 114 aa6.66□□□□□ -1.34
SMC3-202ENST00000462899 OR4A8P0C604 315 aa6.66□□□□□ -1.34
SMC3-202ENST00000462899 HKR1P10072 659 aa6.66□□□□□ -1.34
SMC3-202ENST00000462899 CREB1P16220 341 aa6.66□□□□□ -1.34
SMC3-202ENST00000462899 TCP1P17987 556 aaKnown RBP6.66□□□□□ -1.34
SMC3-202ENST00000462899 CALCRP30988 508 aa6.66□□□□□ -1.34
SMC3-202ENST00000462899 FOXA1P55317 472 aa6.66□□□□□ -1.34
SMC3-202ENST00000462899 UBA52P62987 128 aaKnown RBP6.66□□□□□ -1.34
SMC3-202ENST00000462899 POU6F2P78424 691 aaPredicted RBP6.66□□□□□ -1.34
SMC3-202ENST00000462899 MRPS25P82663 173 aaKnown RBP6.66□□□□□ -1.34
SMC3-202ENST00000462899 SCGB2A2Q13296 93 aa6.66□□□□□ -1.34
SMC3-202ENST00000462899 SKP2Q13309 424 aa6.66□□□□□ -1.34
SMC3-202ENST00000462899 PDE7AQ13946 482 aa6.66□□□□□ -1.34
SMC3-202ENST00000462899 KIAA0040Q15053 153 aa6.66□□□□□ -1.34
SMC3-202ENST00000462899 C3orf36Q3SXR2 165 aa6.66□□□□□ -1.34
SMC3-202ENST00000462899 TIGD2Q4W5G0 525 aa6.66□□□□□ -1.34
SMC3-202ENST00000462899 SYT14P1Q58G82 188 aa6.66□□□□□ -1.34
SMC3-202ENST00000462899 TSPO2Q5TGU0 170 aa6.66□□□□□ -1.34
SMC3-202ENST00000462899 ZDHHC24Q6UX98 284 aa6.66□□□□□ -1.34
SMC3-202ENST00000462899 HOMEZQ8IX15 550 aa6.66□□□□□ -1.34
SMC3-202ENST00000462899 ZCCHC24Q8N2G6 241 aaKnown RBP6.66□□□□□ -1.34
SMC3-202ENST00000462899 UBE2J2Q8N2K1 259 aa6.66□□□□□ -1.34
SMC3-202ENST00000462899 MMGT1Q8N4V1 131 aa6.66□□□□□ -1.34
SMC3-202ENST00000462899 COX18Q8N8Q8 333 aa6.66□□□□□ -1.34
SMC3-202ENST00000462899 ATP6V1C2Q8NEY4 427 aa6.66□□□□□ -1.34
SMC3-202ENST00000462899 NUP37Q8NFH4 326 aa6.66□□□□□ -1.34
SMC3-202ENST00000462899 TOR1AIP2Q8NFQ8 470 aa6.66□□□□□ -1.34
SMC3-202ENST00000462899 OR5W2Q8NH69 310 aa6.66□□□□□ -1.34
SMC3-202ENST00000462899 CEP70Q8NHQ1 597 aa6.66□□□□□ -1.34
SMC3-202ENST00000462899 CLDND2Q8NHS1 167 aa6.66□□□□□ -1.34
SMC3-202ENST00000462899 FAM76AQ8TAV0 307 aa6.66□□□□□ -1.34
SMC3-202ENST00000462899 MRPL24Q96A35 216 aaKnown RBP6.66□□□□□ -1.34
SMC3-202ENST00000462899 CIDECQ96AQ7 238 aaPredicted RBP6.66□□□□□ -1.34
SMC3-202ENST00000462899 OTUB1Q96FW1 271 aaPredicted RBP6.66□□□□□ -1.34
SMC3-202ENST00000462899 EGLN2Q96KS0 407 aa6.66□□□□□ -1.34
SMC3-202ENST00000462899 TMEM237Q96Q45 408 aa6.66□□□□□ -1.34
SMC3-202ENST00000462899 SLC38A2Q96QD8 506 aa6.66□□□□□ -1.34
SMC3-202ENST00000462899 KCNA7Q96RP8 456 aa6.66□□□□□ -1.34
SMC3-202ENST00000462899 JMJD8Q96S16 334 aa6.66□□□□□ -1.34
SMC3-202ENST00000462899 STACQ99469 402 aa6.66□□□□□ -1.34
SMC3-202ENST00000462899 MRPL57Q9BQC6 102 aaKnown RBP6.66□□□□□ -1.34
SMC3-202ENST00000462899 ERP44Q9BS26 406 aa6.66□□□□□ -1.34
SMC3-202ENST00000462899 BTBD2Q9BX70 525 aa6.66□□□□□ -1.34
SMC3-202ENST00000462899 QRSL1Q9H0R6 528 aaKnown RBP6.66□□□□□ -1.34
SMC3-202ENST00000462899 RAB1BQ9H0U4 201 aa6.66□□□□□ -1.34
SMC3-202ENST00000462899 VPS11Q9H270 941 aa6.66□□□□□ -1.34
SMC3-202ENST00000462899 MRPL46Q9H2W6 279 aaKnown RBP6.66□□□□□ -1.34
SMC3-202ENST00000462899 NELFAQ9H3P2 528 aa6.66□□□□□ -1.34
SMC3-202ENST00000462899 ZNF442Q9H7R0 627 aa6.66□□□□□ -1.34
SMC3-202ENST00000462899 SEC61A2Q9H9S3 476 aa6.66□□□□□ -1.34
SMC3-202ENST00000462899 FBXO9Q9UK97 447 aaPredicted RBP6.66□□□□□ -1.34
SMC3-202ENST00000462899 PCDHB14Q9Y5E9 798 aa6.66□□□□□ -1.34
SMC3-202ENST00000462899 FLVCR1Q9Y5Y0 555 aa6.66□□□□□ -1.34
SMC3-202ENST00000462899 CENPVL1A0A0U1RR11 272 aa6.65□□□□□ -1.34
SMC3-202ENST00000462899 LYNX1G3V0Z9 82 aa6.65□□□□□ -1.34
SMC3-202ENST00000462899 SULT2B1O00204 365 aa6.65□□□□□ -1.34
SMC3-202ENST00000462899 GPR171O14626 319 aa6.65□□□□□ -1.34
SMC3-202ENST00000462899 WNT9BO14905 357 aa6.65□□□□□ -1.34
SMC3-202ENST00000462899 PDPK1O15530 556 aa6.65□□□□□ -1.34
SMC3-202ENST00000462899 EIF4E2O60573 245 aaKnown RBP6.65□□□□□ -1.34
SMC3-202ENST00000462899 MRPL33O75394 65 aaKnown RBP6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms