RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 FGFR1OP2Q9NVK5 253 aa7.06□□□□□ -1.28
CDC42BPA-210ENST00000462553 CCDC167Q9P0B6 97 aa7.06□□□□□ -1.28
CDC42BPA-210ENST00000462553 SLAMF8Q9P0V8 285 aa7.06□□□□□ -1.28
CDC42BPA-210ENST00000462553 CLEC4AQ9UMR7 237 aa7.06□□□□□ -1.28
CDC42BPA-210ENST00000462553 CARD8Q9Y2G2 431 aa7.06□□□□□ -1.28
CDC42BPA-210ENST00000462553 WDR45Q9Y484 360 aa7.06□□□□□ -1.28
CDC42BPA-210ENST00000462553 PCDHB14Q9Y5E9 798 aa7.06□□□□□ -1.28
CDC42BPA-210ENST00000462553 AP4B1Q9Y6B7 739 aa7.06□□□□□ -1.28
CDC42BPA-210ENST00000462553 TENM1Q9UKZ4 2725 aa7.06□□□□□ -1.28
CDC42BPA-210ENST00000462553 CLDN24A6NM45 220 aa7.05□□□□□ -1.28
CDC42BPA-210ENST00000462553 OVOL3O00110 214 aa7.05□□□□□ -1.28
CDC42BPA-210ENST00000462553 ZNF264O43296 627 aa7.05□□□□□ -1.28
CDC42BPA-210ENST00000462553 EFNA2O43921 213 aa7.05□□□□□ -1.28
CDC42BPA-210ENST00000462553 EIF4E2O60573 245 aaKnown RBP7.05□□□□□ -1.28
CDC42BPA-210ENST00000462553 TMCC2O75069 709 aa7.05□□□□□ -1.28
CDC42BPA-210ENST00000462553 KRT75O95678 551 aa7.05□□□□□ -1.28
CDC42BPA-210ENST00000462553 THBS1P07996 1170 aa7.05□□□□□ -1.28
CDC42BPA-210ENST00000462553 UBL4AP11441 157 aa7.05□□□□□ -1.28
CDC42BPA-210ENST00000462553 FCGR2AP12318 317 aa7.05□□□□□ -1.28
CDC42BPA-210ENST00000462553 BMP2P12643 396 aa7.05□□□□□ -1.28
CDC42BPA-210ENST00000462553 HPGDP15428 266 aa7.05□□□□□ -1.28
CDC42BPA-210ENST00000462553 PRKCAP17252 672 aa7.05□□□□□ -1.28
CDC42BPA-210ENST00000462553 MAGEA8P43361 318 aa7.05□□□□□ -1.28
CDC42BPA-210ENST00000462553 EEFSECP57772 596 aaKnown RBP7.05□□□□□ -1.28
CDC42BPA-210ENST00000462553 IRX1P78414 480 aaPredicted RBP7.05□□□□□ -1.28
CDC42BPA-210ENST00000462553 TXNL4AP83876 142 aaKnown RBP7.05□□□□□ -1.28
CDC42BPA-210ENST00000462553 GUCY1A3Q02108 690 aa7.05□□□□□ -1.28
CDC42BPA-210ENST00000462553 EXOC3L2Q2M3D2 409 aa7.05□□□□□ -1.28
CDC42BPA-210ENST00000462553 AGKQ53H12 422 aa7.05□□□□□ -1.28
CDC42BPA-210ENST00000462553 SLC25A53Q5H9E4 307 aa7.05□□□□□ -1.28
CDC42BPA-210ENST00000462553 C6orf10Q5SRN2 563 aa7.05□□□□□ -1.28
CDC42BPA-210ENST00000462553 ATAD3BQ5T9A4 648 aa7.05□□□□□ -1.28
CDC42BPA-210ENST00000462553 SEZ6L2Q6UXD5 910 aa7.05□□□□□ -1.28
CDC42BPA-210ENST00000462553 LRRC74BQ6ZQY2 392 aa7.05□□□□□ -1.28
CDC42BPA-210ENST00000462553 RETREG3Q86VR2 466 aa7.05□□□□□ -1.28
CDC42BPA-210ENST00000462553 ZNF611Q8N823 705 aa7.05□□□□□ -1.28
CDC42BPA-210ENST00000462553 MAPK1IP1LQ8NDC0 245 aa7.05□□□□□ -1.28
CDC42BPA-210ENST00000462553 OR5W2Q8NH69 310 aa7.05□□□□□ -1.28
CDC42BPA-210ENST00000462553 LILRB1Q8NHL6 650 aaPredicted RBP7.05□□□□□ -1.28
CDC42BPA-210ENST00000462553 TMEM171Q8WVE6 324 aa7.05□□□□□ -1.28
CDC42BPA-210ENST00000462553 OIT3Q8WWZ8 545 aa7.05□□□□□ -1.28
CDC42BPA-210ENST00000462553 ZBTB8AQ96BR9 441 aa7.05□□□□□ -1.28
CDC42BPA-210ENST00000462553 PLPPR2Q96GM1 343 aa7.05□□□□□ -1.28
CDC42BPA-210ENST00000462553 GMPPAQ96IJ6 420 aaPredicted RBP7.05□□□□□ -1.28
CDC42BPA-210ENST00000462553 ZNF317Q96PQ6 595 aaPredicted RBP7.05□□□□□ -1.28
CDC42BPA-210ENST00000462553 TRNT1Q96Q11 434 aaKnown RBP7.05□□□□□ -1.28
CDC42BPA-210ENST00000462553 CPPED1Q9BRF8 314 aaPredicted RBP7.05□□□□□ -1.28
CDC42BPA-210ENST00000462553 SIKE1Q9BRV8 207 aa7.05□□□□□ -1.28
CDC42BPA-210ENST00000462553 RSPO3Q9BXY4 272 aaPredicted RBP7.05□□□□□ -1.28
CDC42BPA-210ENST00000462553 LAT2Q9GZY6 243 aa7.05□□□□□ -1.28
CDC42BPA-210ENST00000462553 IKZF5Q9H5V7 419 aa7.05□□□□□ -1.28
CDC42BPA-210ENST00000462553 CXorf56Q9H5V9 222 aa7.05□□□□□ -1.28
CDC42BPA-210ENST00000462553 RMND5AQ9H871 391 aa7.05□□□□□ -1.28
CDC42BPA-210ENST00000462553 MED4Q9NPJ6 270 aa7.05□□□□□ -1.28
CDC42BPA-210ENST00000462553 PLSCR4Q9NRQ2 329 aa7.05□□□□□ -1.28
CDC42BPA-210ENST00000462553 TMEM45AQ9NWC5 275 aa7.05□□□□□ -1.28
CDC42BPA-210ENST00000462553 VAPAQ9P0L0 249 aa7.05□□□□□ -1.28
CDC42BPA-210ENST00000462553 GMEB1Q9Y692 573 aa7.05□□□□□ -1.28
CDC42BPA-210ENST00000462553 A0A0G2JND7 137 aa7.04□□□□□ -1.28
CDC42BPA-210ENST00000462553 A0A0J9YW62 118 aa7.04□□□□□ -1.28
CDC42BPA-210ENST00000462553 H3BNH8 94 aa7.04□□□□□ -1.28
CDC42BPA-210ENST00000462553 EIF1AYO14602 144 aaKnown RBP7.04□□□□□ -1.28
CDC42BPA-210ENST00000462553 ATP8B1O43520 1251 aa7.04□□□□□ -1.28
CDC42BPA-210ENST00000462553 GCM2O75603 506 aaPredicted RBP7.04□□□□□ -1.28
CDC42BPA-210ENST00000462553 SOD3P08294 240 aa7.04□□□□□ -1.28
CDC42BPA-210ENST00000462553 TFPTP0C1Z6 253 aa7.04□□□□□ -1.28
CDC42BPA-210ENST00000462553 DANCRP0C864 163 aa7.04□□□□□ -1.28
CDC42BPA-210ENST00000462553 UBTFL6P0CB48 400 aaPredicted RBP7.04□□□□□ -1.28
CDC42BPA-210ENST00000462553 PPP3CBP16298 524 aa7.04□□□□□ -1.28
CDC42BPA-210ENST00000462553 PSMB1P20618 241 aaKnown RBP7.04□□□□□ -1.28
CDC42BPA-210ENST00000462553 ELK4P28324 431 aa7.04□□□□□ -1.28
CDC42BPA-210ENST00000462553 AGTR1P30556 359 aa7.04□□□□□ -1.28
CDC42BPA-210ENST00000462553 EIF1AXP47813 144 aaKnown RBP7.04□□□□□ -1.28
CDC42BPA-210ENST00000462553 ZNF41P51814 821 aaPredicted RBP7.04□□□□□ -1.28
CDC42BPA-210ENST00000462553 ATP5J2P56134 94 aa7.04□□□□□ -1.28
CDC42BPA-210ENST00000462553 DSTNP60981 165 aa7.04□□□□□ -1.28
CDC42BPA-210ENST00000462553 RPS3AP61247 264 aaKnown RBP7.04□□□□□ -1.28
CDC42BPA-210ENST00000462553 RAC1P63000 192 aa7.04□□□□□ -1.28
CDC42BPA-210ENST00000462553 DMTNQ08495 405 aa7.04□□□□□ -1.28
CDC42BPA-210ENST00000462553 GPAT3Q53EU6 434 aa7.04□□□□□ -1.28
CDC42BPA-210ENST00000462553 RPS26P11Q5JNZ5 115 aaPredicted RBP7.04□□□□□ -1.28
CDC42BPA-210ENST00000462553 DLEU7Q6UYE1 221 aa7.04□□□□□ -1.28
CDC42BPA-210ENST00000462553 DNM1P46Q6ZS02 220 aa7.04□□□□□ -1.28
CDC42BPA-210ENST00000462553 ATG4DQ86TL0 474 aaPredicted RBP7.04□□□□□ -1.28
CDC42BPA-210ENST00000462553 WFDC8Q8IUA0 241 aa7.04□□□□□ -1.28
CDC42BPA-210ENST00000462553 ARFGAP2Q8N6H7 521 aa7.04□□□□□ -1.28
CDC42BPA-210ENST00000462553 TOR1AIP2Q8NFQ8 470 aa7.04□□□□□ -1.28
CDC42BPA-210ENST00000462553 OR10D3Q8NH80 312 aa7.04□□□□□ -1.28
CDC42BPA-210ENST00000462553 FBXO27Q8NI29 283 aa7.04□□□□□ -1.28
CDC42BPA-210ENST00000462553 C10orf82Q8WW14 230 aa7.04□□□□□ -1.28
CDC42BPA-210ENST00000462553 CNOT9Q92600 299 aaKnown RBP7.04□□□□□ -1.28
CDC42BPA-210ENST00000462553 AKAP1Q92667 903 aaKnown RBP eCLIP7.04□□□□□ -1.28
CDC42BPA-210ENST00000462553 TMEM19Q96HH6 336 aa7.04□□□□□ -1.28
CDC42BPA-210ENST00000462553 ACTR6Q9GZN1 396 aa7.04□□□□□ -1.28
CDC42BPA-210ENST00000462553 OR10A4Q9H209 315 aa7.04□□□□□ -1.28
CDC42BPA-210ENST00000462553 TMEM185BQ9H7F4 350 aa7.04□□□□□ -1.28
CDC42BPA-210ENST00000462553 COQ10BQ9H8M1 238 aa7.04□□□□□ -1.28
CDC42BPA-210ENST00000462553 HHATLQ9HCP6 504 aa7.04□□□□□ -1.28
CDC42BPA-210ENST00000462553 P2RX2Q9UBL9 471 aa7.04□□□□□ -1.28
CDC42BPA-210ENST00000462553 LIPT1Q9Y234 373 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms