RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 OR4D2P58180 307 aa4.26□□□□□ -1.73
COPS3-204ENST00000462236 SNRPEP62304 92 aaKnown RBP4.26□□□□□ -1.73
COPS3-204ENST00000462236 DYNLT1P63172 113 aa4.26□□□□□ -1.73
COPS3-204ENST00000462236 RUNX1T1Q06455 604 aa4.26□□□□□ -1.73
COPS3-204ENST00000462236 HSPA14Q0VDF9 509 aa4.26□□□□□ -1.73
COPS3-204ENST00000462236 UBE2V1Q13404 147 aa4.26□□□□□ -1.73
COPS3-204ENST00000462236 MELKQ14680 651 aa4.26□□□□□ -1.73
COPS3-204ENST00000462236 ARHGAP19Q14CB8 494 aa4.26□□□□□ -1.73
COPS3-204ENST00000462236 NSDHLQ15738 373 aa4.26□□□□□ -1.73
COPS3-204ENST00000462236 IZUMO4Q1ZYL8 232 aa4.26□□□□□ -1.73
COPS3-204ENST00000462236 TYSND1Q2T9J0 566 aa4.26□□□□□ -1.73
COPS3-204ENST00000462236 FAM98BQ52LJ0 330 aaKnown RBP4.26□□□□□ -1.73
COPS3-204ENST00000462236 ZNF585BQ52M93 769 aa4.26□□□□□ -1.73
COPS3-204ENST00000462236 ANKRD20A2Q5SQ80 823 aa4.26□□□□□ -1.73
COPS3-204ENST00000462236 NDUFAF5Q5TEU4 345 aa4.26□□□□□ -1.73
COPS3-204ENST00000462236 ANKRD20A1Q5TYW2 823 aa4.26□□□□□ -1.73
COPS3-204ENST00000462236 ANKRD20A3Q5VUR7 823 aa4.26□□□□□ -1.73
COPS3-204ENST00000462236 WBP2NLQ6ICG8 309 aa4.26□□□□□ -1.73
COPS3-204ENST00000462236 SLC22A16Q86VW1 577 aa4.26□□□□□ -1.73
COPS3-204ENST00000462236 CTAGE4Q8IX94 777 aa4.26□□□□□ -1.73
COPS3-204ENST00000462236 ODF3L1Q8IXM7 274 aa4.26□□□□□ -1.73
COPS3-204ENST00000462236 GPALPP1Q8IXQ4 340 aa4.26□□□□□ -1.73
COPS3-204ENST00000462236 OR10S1Q8NGN2 331 aa4.26□□□□□ -1.73
COPS3-204ENST00000462236 OR9A1PQ8NGU1 263 aa4.26□□□□□ -1.73
COPS3-204ENST00000462236 CFAP61Q8NHU2 1237 aa4.26□□□□□ -1.73
COPS3-204ENST00000462236 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.26□□□□□ -1.73
COPS3-204ENST00000462236 SMPDL3AQ92484 453 aa4.26□□□□□ -1.73
COPS3-204ENST00000462236 TBL1YQ9BQ87 522 aa4.26□□□□□ -1.73
COPS3-204ENST00000462236 TXLNGYQ9BZA5 131 aa4.26□□□□□ -1.73
COPS3-204ENST00000462236 IL1RL2Q9HB29 575 aa4.26□□□□□ -1.73
COPS3-204ENST00000462236 SH2D2AQ9NP31 389 aa4.26□□□□□ -1.73
COPS3-204ENST00000462236 ZNF701Q9NV72 531 aaPredicted RBP4.26□□□□□ -1.73
COPS3-204ENST00000462236 MTRF1LQ9UGC7 380 aaKnown RBP4.26□□□□□ -1.73
COPS3-204ENST00000462236 PCYOX1Q9UHG3 505 aa4.26□□□□□ -1.73
COPS3-204ENST00000462236 KCNS2Q9ULS6 477 aa4.26□□□□□ -1.73
COPS3-204ENST00000462236 OR2W1Q9Y3N9 320 aa4.26□□□□□ -1.73
COPS3-204ENST00000462236 SLC22A7Q9Y694 548 aa4.26□□□□□ -1.73
COPS3-204ENST00000462236 BZW2Q9Y6E2 419 aaKnown RBP4.26□□□□□ -1.73
COPS3-204ENST00000462236 NBEAL2Q6ZNJ1 2754 aa4.26□□□□□ -1.73
COPS3-204ENST00000462236 VWFP04275 2813 aa4.25□□□□□ -1.73
COPS3-204ENST00000462236 hCG_1818297A0A087WSY0 165 aa4.25□□□□□ -1.73
COPS3-204ENST00000462236 hCG_1809904A0A1W2PP81 198 aa4.25□□□□□ -1.73
COPS3-204ENST00000462236 A0A1W2PPE2 198 aa4.25□□□□□ -1.73
COPS3-204ENST00000462236 A0A1W2PR64 198 aa4.25□□□□□ -1.73
COPS3-204ENST00000462236 APOC4-APOC2K7ER74 178 aa4.25□□□□□ -1.73
COPS3-204ENST00000462236 TLX2O43763 284 aaPredicted RBP4.25□□□□□ -1.73
COPS3-204ENST00000462236 CD5LO43866 347 aa4.25□□□□□ -1.73
COPS3-204ENST00000462236 SSX4O60224 188 aa4.25□□□□□ -1.73
COPS3-204ENST00000462236 ZNF354AO60765 605 aaPredicted RBP4.25□□□□□ -1.73
COPS3-204ENST00000462236 DNAJB6O75190 326 aa4.25□□□□□ -1.73
COPS3-204ENST00000462236 RDH16O75452 317 aa4.25□□□□□ -1.73
COPS3-204ENST00000462236 PSIP1O75475 530 aaKnown RBP4.25□□□□□ -1.73
COPS3-204ENST00000462236 KRT36O76013 467 aa4.25□□□□□ -1.73
COPS3-204ENST00000462236 GOT2P00505 430 aaKnown RBP4.25□□□□□ -1.73
COPS3-204ENST00000462236 APOC2P02655 101 aa4.25□□□□□ -1.73
COPS3-204ENST00000462236 STATHP02808 62 aa4.25□□□□□ -1.73
COPS3-204ENST00000462236 APOA4P06727 396 aa4.25□□□□□ -1.73
COPS3-204ENST00000462236 FHP07954 510 aa4.25□□□□□ -1.73
COPS3-204ENST00000462236 ABCB1P08183 1280 aaPredicted RBP4.25□□□□□ -1.73
COPS3-204ENST00000462236 H2AFZP0C0S5 128 aa4.25□□□□□ -1.73
COPS3-204ENST00000462236 ITGA2P17301 1181 aa4.25□□□□□ -1.73
COPS3-204ENST00000462236 CNR1P21554 472 aa4.25□□□□□ -1.73
COPS3-204ENST00000462236 RPS3P23396 243 aaKnown RBP eCLIP4.25□□□□□ -1.73
COPS3-204ENST00000462236 ATP5DP30049 168 aa4.25□□□□□ -1.73
COPS3-204ENST00000462236 HOXA1P49639 335 aaPredicted RBP4.25□□□□□ -1.73
COPS3-204ENST00000462236 BTG2P78543 158 aa4.25□□□□□ -1.73
COPS3-204ENST00000462236 MYL5Q02045 173 aa4.25□□□□□ -1.73
COPS3-204ENST00000462236 ACTN3Q08043 901 aaPredicted RBP4.25□□□□□ -1.73
COPS3-204ENST00000462236 TFDP2Q14188 446 aa4.25□□□□□ -1.73
COPS3-204ENST00000462236 ACKR1Q16570 336 aa4.25□□□□□ -1.73
COPS3-204ENST00000462236 ACSF3Q4G176 576 aaPredicted RBP4.25□□□□□ -1.73
COPS3-204ENST00000462236 FILIP1LQ4L180 1135 aa4.25□□□□□ -1.73
COPS3-204ENST00000462236 IGSF11Q5DX21 431 aa4.25□□□□□ -1.73
COPS3-204ENST00000462236 XKR6Q5GH73 641 aa4.25□□□□□ -1.73
COPS3-204ENST00000462236 C9orf152Q5JTZ5 239 aa4.25□□□□□ -1.73
COPS3-204ENST00000462236 WLSQ5T9L3 541 aa4.25□□□□□ -1.73
COPS3-204ENST00000462236 SLC30A6Q6NXT4 461 aa4.25□□□□□ -1.73
COPS3-204ENST00000462236 DNM1P46Q6ZS02 220 aa4.25□□□□□ -1.73
COPS3-204ENST00000462236 H2AFVQ71UI9 128 aa4.25□□□□□ -1.73
COPS3-204ENST00000462236 PLD3Q8IV08 490 aa4.25□□□□□ -1.73
COPS3-204ENST00000462236 KRT222Q8N1A0 295 aa4.25□□□□□ -1.73
COPS3-204ENST00000462236 FBXW8Q8N3Y1 598 aa4.25□□□□□ -1.73
COPS3-204ENST00000462236 RFLNBQ8N5W9 214 aa4.25□□□□□ -1.73
COPS3-204ENST00000462236 SECTM1Q8WVN6 248 aa4.25□□□□□ -1.73
COPS3-204ENST00000462236 LPGAT1Q92604 370 aa4.25□□□□□ -1.73
COPS3-204ENST00000462236 RERGQ96A58 199 aaPredicted RBP4.25□□□□□ -1.73
COPS3-204ENST00000462236 DGAT2Q96PD7 388 aa4.25□□□□□ -1.73
COPS3-204ENST00000462236 CDRT15Q96T59 188 aa4.25□□□□□ -1.73
COPS3-204ENST00000462236 FAM173AQ9BQD7 235 aa4.25□□□□□ -1.73
COPS3-204ENST00000462236 ACAT2Q9BWD1 397 aa4.25□□□□□ -1.73
COPS3-204ENST00000462236 DEFB126Q9BYW3 111 aa4.25□□□□□ -1.73
COPS3-204ENST00000462236 ATG10Q9H0Y0 220 aa4.25□□□□□ -1.73
COPS3-204ENST00000462236 P2RY12Q9H244 342 aa4.25□□□□□ -1.73
COPS3-204ENST00000462236 C10orf88Q9H8K7 445 aa4.25□□□□□ -1.73
COPS3-204ENST00000462236 PROK2Q9HC23 129 aa4.25□□□□□ -1.73
COPS3-204ENST00000462236 HHATLQ9HCP6 504 aa4.25□□□□□ -1.73
COPS3-204ENST00000462236 ACKR4Q9NPB9 350 aa4.25□□□□□ -1.73
COPS3-204ENST00000462236 QPCTLQ9NXS2 382 aa4.25□□□□□ -1.73
COPS3-204ENST00000462236 CRNNQ9UBG3 495 aaPredicted RBP4.25□□□□□ -1.73
COPS3-204ENST00000462236 TAC3Q9UHF0 121 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms