RNA–Protein interactions for RNA: ENST00000461578.1

PABPC4-208, Transcript of poly(A) binding protein cytoplasmic 4, human

TSL 5

Gene PABPC4, Length 193 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC4-208	ENST00000461578	TRIP10	Q15642	601 aa		11.97	□□□□□ -0.49
PABPC4-208	ENST00000461578	SPDYE7P	Q495Y7	208 aa		11.97	□□□□□ -0.49
PABPC4-208	ENST00000461578	HIKESHI	Q53FT3	197 aa		11.97	□□□□□ -0.49
PABPC4-208	ENST00000461578	TSPO2	Q5TGU0	170 aa		11.97	□□□□□ -0.49
PABPC4-208	ENST00000461578	FRMD7	Q6ZUT3	714 aa		11.97	□□□□□ -0.49
PABPC4-208	ENST00000461578	RELL1	Q8IUW5	271 aa		11.97	□□□□□ -0.49
PABPC4-208	ENST00000461578	ZCCHC24	Q8N2G6	241 aa	Known RBP	11.97	□□□□□ -0.49
PABPC4-208	ENST00000461578	C1orf162	Q8NEQ5	155 aa	Predicted RBP	11.97	□□□□□ -0.49
PABPC4-208	ENST00000461578	OR7A2P	Q8NGA2	310 aa		11.97	□□□□□ -0.49
PABPC4-208	ENST00000461578	OR5D16	Q8NGK9	328 aa		11.97	□□□□□ -0.49
PABPC4-208	ENST00000461578	OR2T11	Q8NH01	316 aa		11.97	□□□□□ -0.49
PABPC4-208	ENST00000461578	SLC25A43	Q8WUT9	341 aa	Predicted RBP	11.97	□□□□□ -0.49
PABPC4-208	ENST00000461578	TMEM234	Q8WY98	164 aa		11.97	□□□□□ -0.49
PABPC4-208	ENST00000461578	GCDH	Q92947	438 aa	Predicted RBP	11.97	□□□□□ -0.49
PABPC4-208	ENST00000461578	OR11A1	Q9GZK7	315 aa		11.97	□□□□□ -0.49
PABPC4-208	ENST00000461578	RAB1B	Q9H0U4	201 aa		11.97	□□□□□ -0.49
PABPC4-208	ENST00000461578		A0A087WUV0	522 aa	Predicted RBP	11.96	□□□□□ -0.49
PABPC4-208	ENST00000461578	IGHV1-18	A0A0C4DH31	117 aa		11.96	□□□□□ -0.49
PABPC4-208	ENST00000461578	SLC28A1	O00337	649 aa		11.96	□□□□□ -0.49
PABPC4-208	ENST00000461578	PMS2P2	O95744	297 aa		11.96	□□□□□ -0.49
PABPC4-208	ENST00000461578	CSTA	P01040	98 aa		11.96	□□□□□ -0.49
PABPC4-208	ENST00000461578	TACSTD2	P09758	323 aa		11.96	□□□□□ -0.49
PABPC4-208	ENST00000461578	UROS	P10746	265 aa		11.96	□□□□□ -0.49
PABPC4-208	ENST00000461578	MYL2	P10916	166 aa		11.96	□□□□□ -0.49
PABPC4-208	ENST00000461578	PGC	P20142	388 aa		11.96	□□□□□ -0.49
PABPC4-208	ENST00000461578	PRPH2	P23942	346 aa		11.96	□□□□□ -0.49
PABPC4-208	ENST00000461578	IDH3G	P51553	393 aa	Predicted RBP	11.96	□□□□□ -0.49
PABPC4-208	ENST00000461578	SLC16A1	P53985	500 aa		11.96	□□□□□ -0.49
PABPC4-208	ENST00000461578	TGFBR3	Q03167	851 aa		11.96	□□□□□ -0.49
PABPC4-208	ENST00000461578	ADIPOQ	Q15848	244 aa		11.96	□□□□□ -0.49
PABPC4-208	ENST00000461578	GALNTL6	Q49A17	601 aa		11.96	□□□□□ -0.49
PABPC4-208	ENST00000461578	RFTN2	Q52LD8	501 aa	Predicted RBP	11.96	□□□□□ -0.49
PABPC4-208	ENST00000461578	CFAP157	Q5JU67	520 aa		11.96	□□□□□ -0.49
PABPC4-208	ENST00000461578	LIPM	Q5VYY2	423 aa		11.96	□□□□□ -0.49
PABPC4-208	ENST00000461578	TIFAB	Q6ZNK6	161 aa		11.96	□□□□□ -0.49
PABPC4-208	ENST00000461578	OR56A1	Q8NGH5	318 aa		11.96	□□□□□ -0.49
PABPC4-208	ENST00000461578	OR5AK3P	Q8NH89	298 aa		11.96	□□□□□ -0.49
PABPC4-208	ENST00000461578	ZNF563	Q8TA94	476 aa		11.96	□□□□□ -0.49
PABPC4-208	ENST00000461578	ZFAND2B	Q8WV99	257 aa		11.96	□□□□□ -0.49
PABPC4-208	ENST00000461578	HPS1	Q92902	700 aa		11.96	□□□□□ -0.49
PABPC4-208	ENST00000461578	METTL2A	Q96IZ6	378 aa	Known RBP	11.96	□□□□□ -0.49
PABPC4-208	ENST00000461578	FCRL1	Q96LA6	429 aa		11.96	□□□□□ -0.49
PABPC4-208	ENST00000461578	SLC38A2	Q96QD8	506 aa		11.96	□□□□□ -0.49
PABPC4-208	ENST00000461578	OR7D2	Q96RA2	312 aa		11.96	□□□□□ -0.49
PABPC4-208	ENST00000461578	SDF2	Q99470	211 aa		11.96	□□□□□ -0.49
PABPC4-208	ENST00000461578	ACER3	Q9NUN7	267 aa		11.96	□□□□□ -0.49
PABPC4-208	ENST00000461578	GPATCH2	Q9NW75	528 aa		11.96	□□□□□ -0.49
PABPC4-208	ENST00000461578	CHRNA9	Q9UGM1	479 aa		11.96	□□□□□ -0.49
PABPC4-208	ENST00000461578	KCNE5	Q9UJ90	142 aa		11.96	□□□□□ -0.49
PABPC4-208	ENST00000461578	FLVCR1	Q9Y5Y0	555 aa		11.96	□□□□□ -0.49
PABPC4-208	ENST00000461578	SPIN1	Q9Y657	262 aa	Predicted RBP	11.96	□□□□□ -0.49
PABPC4-208	ENST00000461578	MGAM2	Q2M2H8	2515 aa		11.95	□□□□□ -0.5
PABPC4-208	ENST00000461578	NUP214	P35658	2090 aa	Predicted RBP	11.95	□□□□□ -0.5
PABPC4-208	ENST00000461578		A0A0A6YYJ9	748 aa		11.95	□□□□□ -0.5
PABPC4-208	ENST00000461578	SLCO1B7	G3V0H7	640 aa		11.95	□□□□□ -0.5
PABPC4-208	ENST00000461578		G3V2L1	256 aa		11.95	□□□□□ -0.5
PABPC4-208	ENST00000461578	C6orf47	O95873	294 aa		11.95	□□□□□ -0.5
PABPC4-208	ENST00000461578	KRT16	P08779	473 aa		11.95	□□□□□ -0.5
PABPC4-208	ENST00000461578	LINC00032	P0C843	101 aa		11.95	□□□□□ -0.5
PABPC4-208	ENST00000461578	LAMP1	P11279	417 aa		11.95	□□□□□ -0.5
PABPC4-208	ENST00000461578	GIF	P27352	417 aa		11.95	□□□□□ -0.5
PABPC4-208	ENST00000461578	GCA	P28676	217 aa		11.95	□□□□□ -0.5
PABPC4-208	ENST00000461578	MPG	P29372	298 aa		11.95	□□□□□ -0.5
PABPC4-208	ENST00000461578	RYK	P34925	604 aa		11.95	□□□□□ -0.5
PABPC4-208	ENST00000461578	COMP	P49747	757 aa	Predicted RBP	11.95	□□□□□ -0.5
PABPC4-208	ENST00000461578	PPOX	P50336	477 aa		11.95	□□□□□ -0.5
PABPC4-208	ENST00000461578	DVL1P1	P54792	670 aa	Predicted RBP	11.95	□□□□□ -0.5
PABPC4-208	ENST00000461578	RPS26	P62854	115 aa	Known RBP	11.95	□□□□□ -0.5
PABPC4-208	ENST00000461578	LGALS3BP	Q08380	585 aa		11.95	□□□□□ -0.5
PABPC4-208	ENST00000461578	THSD4	Q6ZMP0	1018 aa		11.95	□□□□□ -0.5
PABPC4-208	ENST00000461578	R3HCC1L	Q7Z5L2	792 aa	Known RBP	11.95	□□□□□ -0.5
PABPC4-208	ENST00000461578	LCA5	Q86VQ0	697 aa		11.95	□□□□□ -0.5
PABPC4-208	ENST00000461578	CCDC106	Q9BWC9	280 aa		11.95	□□□□□ -0.5
PABPC4-208	ENST00000461578	PLK3	Q9H4B4	646 aa		11.95	□□□□□ -0.5
PABPC4-208	ENST00000461578	PARPBP	Q9NWS1	579 aa		11.95	□□□□□ -0.5
PABPC4-208	ENST00000461578	MKLN1	Q9UL63	735 aa		11.95	□□□□□ -0.5
PABPC4-208	ENST00000461578	EMCN	Q9ULC0	261 aa		11.95	□□□□□ -0.5
PABPC4-208	ENST00000461578	PYCARD	Q9ULZ3	195 aa		11.95	□□□□□ -0.5
PABPC4-208	ENST00000461578	SLC9A8	Q9Y2E8	581 aa		11.95	□□□□□ -0.5
PABPC4-208	ENST00000461578	HDGFL3	Q9Y3E1	203 aa		11.95	□□□□□ -0.5
PABPC4-208	ENST00000461578	SH3PXD2B	A1X283	911 aa		11.94	□□□□□ -0.5
PABPC4-208	ENST00000461578	LYNX1	G3V0Z9	82 aa		11.94	□□□□□ -0.5
PABPC4-208	ENST00000461578	SCAMP2	O15127	329 aa	Known RBP	11.94	□□□□□ -0.5
PABPC4-208	ENST00000461578	FCMR	O60667	390 aa		11.94	□□□□□ -0.5
PABPC4-208	ENST00000461578	DNAJA2	O60884	412 aa		11.94	□□□□□ -0.5
PABPC4-208	ENST00000461578	BCAS1	O75363	584 aa	Predicted RBP	11.94	□□□□□ -0.5
PABPC4-208	ENST00000461578	CRYAA	P02489	173 aa		11.94	□□□□□ -0.5
PABPC4-208	ENST00000461578	LYNX1	P0DP58	116 aa		11.94	□□□□□ -0.5
PABPC4-208	ENST00000461578	BCKDHA	P12694	445 aa		11.94	□□□□□ -0.5
PABPC4-208	ENST00000461578	IFNGR1	P15260	489 aa		11.94	□□□□□ -0.5
PABPC4-208	ENST00000461578	CREB1	P16220	341 aa		11.94	□□□□□ -0.5
PABPC4-208	ENST00000461578	CASQ1	P31415	396 aa		11.94	□□□□□ -0.5
PABPC4-208	ENST00000461578	SOAT1	P35610	550 aa		11.94	□□□□□ -0.5
PABPC4-208	ENST00000461578	HPCAL1	P37235	193 aa		11.94	□□□□□ -0.5
PABPC4-208	ENST00000461578	APOBEC1	P41238	236 aa	Known RBP	11.94	□□□□□ -0.5
PABPC4-208	ENST00000461578	ASMT	P46597	345 aa		11.94	□□□□□ -0.5
PABPC4-208	ENST00000461578	TUBA1B	P68363	451 aa		11.94	□□□□□ -0.5
PABPC4-208	ENST00000461578	TUBA4A	P68366	448 aa		11.94	□□□□□ -0.5
PABPC4-208	ENST00000461578	ZYG11A	Q6WRX3	759 aa		11.94	□□□□□ -0.5
PABPC4-208	ENST00000461578	TUBA1A	Q71U36	451 aa		11.94	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 38 ms