RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 RHOXF2Q9BQY4 288 aa2.44□□□□□ -2.02
HPS3-203ENST00000460822 FEM1AQ9BSK4 669 aa2.44□□□□□ -2.02
HPS3-203ENST00000460822 RBM4Q9BWF3 364 aaKnown RBP2.44□□□□□ -2.02
HPS3-203ENST00000460822 IQCGQ9H095 443 aaKnown RBP2.44□□□□□ -2.02
HPS3-203ENST00000460822 NXF5Q9H1B4 397 aaKnown RBP2.44□□□□□ -2.02
HPS3-203ENST00000460822 XKR8Q9H6D3 395 aa2.44□□□□□ -2.02
HPS3-203ENST00000460822 MOB1AQ9H8S9 216 aa2.44□□□□□ -2.02
HPS3-203ENST00000460822 SP140LQ9H930 580 aa2.44□□□□□ -2.02
HPS3-203ENST00000460822 SLC17A5Q9NRA2 495 aa2.44□□□□□ -2.02
HPS3-203ENST00000460822 MGAT4AQ9UM21 535 aa2.44□□□□□ -2.02
HPS3-203ENST00000460822 POLDIP2Q9Y2S7 368 aa2.44□□□□□ -2.02
HPS3-203ENST00000460822 CPS1P31327 1500 aa2.44□□□□□ -2.02
HPS3-203ENST00000460822 DDX60Q8IY21 1712 aaKnown RBP2.44□□□□□ -2.02
HPS3-203ENST00000460822 EDC4Q6P2E9 1401 aaKnown RBP2.44□□□□□ -2.02
HPS3-203ENST00000460822 SALL1Q9NSC2 1324 aa2.44□□□□□ -2.02
HPS3-203ENST00000460822 AGLP35573 1532 aa2.43□□□□□ -2.02
HPS3-203ENST00000460822 PPIAL4EA0A075B759 164 aa2.43□□□□□ -2.02
HPS3-203ENST00000460822 NPIPA7E9PJI5 369 aa2.43□□□□□ -2.02
HPS3-203ENST00000460822 C11orf98E9PRG8 122 aa2.43□□□□□ -2.02
HPS3-203ENST00000460822 H3BQF6 201 aa2.43□□□□□ -2.02
HPS3-203ENST00000460822 K7EQG2 157 aa2.43□□□□□ -2.02
HPS3-203ENST00000460822 TRAFD1O14545 582 aaPredicted RBP2.43□□□□□ -2.02
HPS3-203ENST00000460822 TFECO14948 347 aaPredicted RBP2.43□□□□□ -2.02
HPS3-203ENST00000460822 LRATO95237 230 aa2.43□□□□□ -2.02
HPS3-203ENST00000460822 F10P00742 488 aa2.43□□□□□ -2.02
HPS3-203ENST00000460822 CST1P01037 141 aa2.43□□□□□ -2.02
HPS3-203ENST00000460822 SP1P08047 785 aa2.43□□□□□ -2.02
HPS3-203ENST00000460822 IGFBP1P08833 259 aaPredicted RBP2.43□□□□□ -2.02
HPS3-203ENST00000460822 NPIPA8P0DM63 369 aa2.43□□□□□ -2.02
HPS3-203ENST00000460822 PPIAL4FP0DN26 164 aa2.43□□□□□ -2.02
HPS3-203ENST00000460822 HSD17B1P14061 328 aa2.43□□□□□ -2.02
HPS3-203ENST00000460822 CPN2P22792 545 aa2.43□□□□□ -2.02
HPS3-203ENST00000460822 HNRNPH3P31942 346 aaKnown RBP2.43□□□□□ -2.02
HPS3-203ENST00000460822 CASP14P31944 242 aa2.43□□□□□ -2.02
HPS3-203ENST00000460822 RPL4P36578 427 aaKnown RBP2.43□□□□□ -2.02
HPS3-203ENST00000460822 SLC1A4P43007 532 aa2.43□□□□□ -2.02
HPS3-203ENST00000460822 MAGEA9P43362 315 aa2.43□□□□□ -2.02
HPS3-203ENST00000460822 P2RY1P47900 373 aa2.43□□□□□ -2.02
HPS3-203ENST00000460822 EFNB2P52799 333 aa2.43□□□□□ -2.02
HPS3-203ENST00000460822 FKBP3Q00688 224 aaKnown RBP2.43□□□□□ -2.02
HPS3-203ENST00000460822 ACY1Q03154 408 aa2.43□□□□□ -2.02
HPS3-203ENST00000460822 BST2Q10589 180 aaKnown RBP2.43□□□□□ -2.02
HPS3-203ENST00000460822 SLC5A12Q1EHB4 618 aa2.43□□□□□ -2.02
HPS3-203ENST00000460822 MTHFSDQ2M296 383 aaKnown RBP2.43□□□□□ -2.02
HPS3-203ENST00000460822 SNAI3Q3KNW1 292 aa2.43□□□□□ -2.02
HPS3-203ENST00000460822 ARMCX5Q6P1M9 558 aa2.43□□□□□ -2.02
HPS3-203ENST00000460822 TMEM107Q6UX40 140 aa2.43□□□□□ -2.02
HPS3-203ENST00000460822 GCNT7Q6ZNI0 430 aa2.43□□□□□ -2.02
HPS3-203ENST00000460822 GDPGP1Q6ZNW5 385 aa2.43□□□□□ -2.02
HPS3-203ENST00000460822 ZFAND4Q86XD8 727 aa2.43□□□□□ -2.02
HPS3-203ENST00000460822 IQCF2Q8IXL9 164 aa2.43□□□□□ -2.02
HPS3-203ENST00000460822 GTPBP8Q8N3Z3 284 aaPredicted RBP2.43□□□□□ -2.02
HPS3-203ENST00000460822 ZNF491Q8N8L2 437 aa2.43□□□□□ -2.02
HPS3-203ENST00000460822 ZSCAN4Q8NAM6 433 aaPredicted RBP2.43□□□□□ -2.02
HPS3-203ENST00000460822 DRAXINQ8NBI3 349 aaPredicted RBP2.43□□□□□ -2.02
HPS3-203ENST00000460822 MNS1Q8NEH6 495 aa2.43□□□□□ -2.02
HPS3-203ENST00000460822 OR5L2Q8NGL0 311 aa2.43□□□□□ -2.02
HPS3-203ENST00000460822 OR2T6Q8NHC8 308 aa2.43□□□□□ -2.02
HPS3-203ENST00000460822 SSC4DQ8WTU2 575 aa2.43□□□□□ -2.02
HPS3-203ENST00000460822 TSEN15Q8WW01 171 aaKnown RBP2.43□□□□□ -2.02
HPS3-203ENST00000460822 HAVCR1Q96D42 359 aa2.43□□□□□ -2.02
HPS3-203ENST00000460822 TM4SF19Q96DZ7 209 aa2.43□□□□□ -2.02
HPS3-203ENST00000460822 PGLYRP2Q96PD5 576 aa2.43□□□□□ -2.02
HPS3-203ENST00000460822 TECTBQ96PL2 329 aa2.43□□□□□ -2.02
HPS3-203ENST00000460822 F2RL3Q96RI0 385 aa2.43□□□□□ -2.02
HPS3-203ENST00000460822 CCT8L2Q96SF2 557 aa2.43□□□□□ -2.02
HPS3-203ENST00000460822 LGMNQ99538 433 aa2.43□□□□□ -2.02
HPS3-203ENST00000460822 SLC6A7Q99884 636 aa2.43□□□□□ -2.02
HPS3-203ENST00000460822 SIKE1Q9BRV8 207 aa2.43□□□□□ -2.02
HPS3-203ENST00000460822 TRIM62Q9BVG3 475 aa2.43□□□□□ -2.02
HPS3-203ENST00000460822 IKZF5Q9H5V7 419 aa2.43□□□□□ -2.02
HPS3-203ENST00000460822 GEMIN7Q9H840 131 aaKnown RBP2.43□□□□□ -2.02
HPS3-203ENST00000460822 CYP3A43Q9HB55 503 aa2.43□□□□□ -2.02
HPS3-203ENST00000460822 KLHL28Q9NXS3 571 aa2.43□□□□□ -2.02
HPS3-203ENST00000460822 IL36GQ9NZH8 169 aa2.43□□□□□ -2.02
HPS3-203ENST00000460822 PDP1Q9P0J1 537 aaPredicted RBP2.43□□□□□ -2.02
HPS3-203ENST00000460822 GALPQ9UBC7 116 aa2.43□□□□□ -2.02
HPS3-203ENST00000460822 CIDEBQ9UHD4 219 aa2.43□□□□□ -2.02
HPS3-203ENST00000460822 NPIPA1Q9UND3 350 aa2.43□□□□□ -2.02
HPS3-203ENST00000460822 PACSIN2Q9UNF0 486 aaPredicted RBP2.43□□□□□ -2.02
HPS3-203ENST00000460822 PPIAL4AQ9Y536 164 aa2.43□□□□□ -2.02
HPS3-203ENST00000460822 ALG6Q9Y672 507 aa2.43□□□□□ -2.02
HPS3-203ENST00000460822 MYH13Q9UKX3 1938 aa2.43□□□□□ -2.02
HPS3-203ENST00000460822 TOPAZ1Q8N9V7 1692 aa2.43□□□□□ -2.02
HPS3-203ENST00000460822 NPHP4O75161 1426 aaPredicted RBP2.43□□□□□ -2.02
HPS3-203ENST00000460822 SCN5AQ14524 2016 aa2.43□□□□□ -2.02
HPS3-203ENST00000460822 METP08581 1390 aa2.43□□□□□ -2.02
HPS3-203ENST00000460822 MAP3K5Q99683 1374 aa2.43□□□□□ -2.02
HPS3-203ENST00000460822 KDM3BQ7LBC6 1761 aa2.43□□□□□ -2.02
HPS3-203ENST00000460822 USP42Q9H9J4 1324 aaKnown RBP2.43□□□□□ -2.02
HPS3-203ENST00000460822 TSPOAP1O95153 1857 aa2.43□□□□□ -2.02
HPS3-203ENST00000460822 A0A087WWV3 80 aa2.43□□□□□ -2.02
HPS3-203ENST00000460822 TEX48A0A1B0GUV7 120 aa2.43□□□□□ -2.02
HPS3-203ENST00000460822 MPTX1A8MV57 137 aa2.43□□□□□ -2.02
HPS3-203ENST00000460822 C9JVG2 144 aa2.43□□□□□ -2.02
HPS3-203ENST00000460822 HAS3O00219 553 aa2.43□□□□□ -2.02
HPS3-203ENST00000460822 TAPBPO15533 448 aa2.43□□□□□ -2.02
HPS3-203ENST00000460822 NUDT14O95848 222 aa2.43□□□□□ -2.02
HPS3-203ENST00000460822 IVLP07476 585 aa2.43□□□□□ -2.02
HPS3-203ENST00000460822 H2BFMP0C1H6 154 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms