RNA–Protein interactions for RNA: ENST00000460194.1

SRRT-206, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-206ENST00000460194 PRR14Q9BWN1 585 aa11.56□□□□□ -0.56
SRRT-206ENST00000460194 C1QTNF6Q9BXI9 259 aa11.56□□□□□ -0.56
SRRT-206ENST00000460194 BHLHE41Q9C0J9 482 aaPredicted RBP11.56□□□□□ -0.56
SRRT-206ENST00000460194 CTPS2Q9NRF8 586 aa11.56□□□□□ -0.56
SRRT-206ENST00000460194 ASB6Q9NWX5 421 aa11.56□□□□□ -0.56
SRRT-206ENST00000460194 EMC3Q9P0I2 261 aa11.56□□□□□ -0.56
SRRT-206ENST00000460194 MKLN1Q9UL63 735 aa11.56□□□□□ -0.56
SRRT-206ENST00000460194 NOSIPQ9Y314 301 aaKnown RBP11.56□□□□□ -0.56
SRRT-206ENST00000460194 DNPH1O43598 174 aa11.55□□□□□ -0.56
SRRT-206ENST00000460194 NPHS1O60500 1241 aa11.55□□□□□ -0.56
SRRT-206ENST00000460194 PEX11AO75192 247 aa11.55□□□□□ -0.56
SRRT-206ENST00000460194 STX11O75558 287 aa11.55□□□□□ -0.56
SRRT-206ENST00000460194 LYPLA1O75608 230 aaPredicted RBP11.55□□□□□ -0.56
SRRT-206ENST00000460194 CSTAP01040 98 aa11.55□□□□□ -0.56
SRRT-206ENST00000460194 CSF3P09919 207 aa11.55□□□□□ -0.56
SRRT-206ENST00000460194 ALDH3A1P30838 453 aa11.55□□□□□ -0.56
SRRT-206ENST00000460194 APOBEC3AP31941 199 aaPredicted RBP11.55□□□□□ -0.56
SRRT-206ENST00000460194 CCR4P51679 360 aa11.55□□□□□ -0.56
SRRT-206ENST00000460194 CHRNEQ04844 493 aa11.55□□□□□ -0.56
SRRT-206ENST00000460194 LSM12Q3MHD2 195 aaKnown RBP11.55□□□□□ -0.56
SRRT-206ENST00000460194 IL23RQ5VWK5 629 aa11.55□□□□□ -0.56
SRRT-206ENST00000460194 TYW3Q6IPR3 259 aaKnown RBP11.55□□□□□ -0.56
SRRT-206ENST00000460194 KLHL17Q6TDP4 642 aa11.55□□□□□ -0.56
SRRT-206ENST00000460194 C6orf120Q7Z4R8 191 aa11.55□□□□□ -0.56
SRRT-206ENST00000460194 HOMEZQ8IX15 550 aa11.55□□□□□ -0.56
SRRT-206ENST00000460194 DDIASQ8IXT1 998 aa11.55□□□□□ -0.56
SRRT-206ENST00000460194 CLEC4FQ8N1N0 589 aa11.55□□□□□ -0.56
SRRT-206ENST00000460194 TMCO5AQ8N6Q1 288 aa11.55□□□□□ -0.56
SRRT-206ENST00000460194 C1orf162Q8NEQ5 155 aaPredicted RBP11.55□□□□□ -0.56
SRRT-206ENST00000460194 TMEM234Q8WY98 164 aa11.55□□□□□ -0.56
SRRT-206ENST00000460194 MSI2Q96DH6 328 aaKnown RBP11.55□□□□□ -0.56
SRRT-206ENST00000460194 SOX7Q9BT81 388 aa11.55□□□□□ -0.56
SRRT-206ENST00000460194 C1orf50Q9BV19 199 aa11.55□□□□□ -0.56
SRRT-206ENST00000460194 OR11A1Q9GZK7 315 aa11.55□□□□□ -0.56
SRRT-206ENST00000460194 SHARPINQ9H0F6 387 aa11.55□□□□□ -0.56
SRRT-206ENST00000460194 SLC17A5Q9NRA2 495 aa11.55□□□□□ -0.56
SRRT-206ENST00000460194 SERINC1Q9NRX5 453 aa11.55□□□□□ -0.56
SRRT-206ENST00000460194 MKS1Q9NXB0 559 aa11.55□□□□□ -0.56
SRRT-206ENST00000460194 CHRNA9Q9UGM1 479 aa11.55□□□□□ -0.56
SRRT-206ENST00000460194 DCTN4Q9UJW0 460 aa11.55□□□□□ -0.56
SRRT-206ENST00000460194 HDGFL3Q9Y3E1 203 aa11.55□□□□□ -0.56
SRRT-206ENST00000460194 FLVCR1Q9Y5Y0 555 aa11.55□□□□□ -0.56
SRRT-206ENST00000460194 CIB4A0PJX0 185 aa11.54□□□□□ -0.56
SRRT-206ENST00000460194 PRAMEF27A3QJZ7 478 aa11.54□□□□□ -0.56
SRRT-206ENST00000460194 M0R1B8 84 aa11.54□□□□□ -0.56
SRRT-206ENST00000460194 COPEO14579 308 aa11.54□□□□□ -0.56
SRRT-206ENST00000460194 GPR171O14626 319 aa11.54□□□□□ -0.56
SRRT-206ENST00000460194 KIAA0513O60268 411 aa11.54□□□□□ -0.56
SRRT-206ENST00000460194 CHEK2O96017 543 aa11.54□□□□□ -0.56
SRRT-206ENST00000460194 AK1P00568 194 aa11.54□□□□□ -0.56
SRRT-206ENST00000460194 UBTFL6P0CB48 400 aaPredicted RBP11.54□□□□□ -0.56
SRRT-206ENST00000460194 IMPDH2P12268 514 aa11.54□□□□□ -0.56
SRRT-206ENST00000460194 DDX5P17844 614 aaKnown RBP11.54□□□□□ -0.56
SRRT-206ENST00000460194 PGCP20142 388 aa11.54□□□□□ -0.56
SRRT-206ENST00000460194 PRPS1L1P21108 318 aa11.54□□□□□ -0.56
SRRT-206ENST00000460194 MATN1P21941 496 aa11.54□□□□□ -0.56
SRRT-206ENST00000460194 MAPK1P28482 360 aa11.54□□□□□ -0.56
SRRT-206ENST00000460194 NR4A2P43354 598 aa11.54□□□□□ -0.56
SRRT-206ENST00000460194 CLK1P49759 484 aaKnown RBP11.54□□□□□ -0.56
SRRT-206ENST00000460194 PHC1P78364 1004 aa11.54□□□□□ -0.56
SRRT-206ENST00000460194 SLC17A1Q14916 467 aa11.54□□□□□ -0.56
SRRT-206ENST00000460194 FAM120AOSQ5T036 256 aa11.54□□□□□ -0.56
SRRT-206ENST00000460194 C1QTNF12Q5T7M4 302 aa11.54□□□□□ -0.56
SRRT-206ENST00000460194 EMBQ6PCB8 327 aa11.54□□□□□ -0.56
SRRT-206ENST00000460194 IL17RELQ6ZVW7 336 aa11.54□□□□□ -0.56
SRRT-206ENST00000460194 IFT20Q8IY31 132 aa11.54□□□□□ -0.56
SRRT-206ENST00000460194 CLECL1Q8IZS7 167 aa11.54□□□□□ -0.56
SRRT-206ENST00000460194 C4orf33Q8N1A6 199 aa11.54□□□□□ -0.56
SRRT-206ENST00000460194 UBE2J2Q8N2K1 259 aa11.54□□□□□ -0.56
SRRT-206ENST00000460194 C17orf78Q8N4C9 275 aa11.54□□□□□ -0.56
SRRT-206ENST00000460194 ZIC4Q8N9L1 334 aa11.54□□□□□ -0.56
SRRT-206ENST00000460194 CCDC63Q8NA47 563 aa11.54□□□□□ -0.56
SRRT-206ENST00000460194 PIGXQ8TBF5 258 aa11.54□□□□□ -0.56
SRRT-206ENST00000460194 EPS8L3Q8TE67 593 aaKnown RBP11.54□□□□□ -0.56
SRRT-206ENST00000460194 OIT3Q8WWZ8 545 aa11.54□□□□□ -0.56
SRRT-206ENST00000460194 ANP32BQ92688 251 aaKnown RBP11.54□□□□□ -0.56
SRRT-206ENST00000460194 DNAJA3Q96EY1 480 aa11.54□□□□□ -0.56
SRRT-206ENST00000460194 SORCS2Q96PQ0 1159 aa11.54□□□□□ -0.56
SRRT-206ENST00000460194 DUSP26Q9BV47 211 aa11.54□□□□□ -0.56
SRRT-206ENST00000460194 MECRQ9BV79 373 aa11.54□□□□□ -0.56
SRRT-206ENST00000460194 SLC7A10Q9NS82 523 aa11.54□□□□□ -0.56
SRRT-206ENST00000460194 ATAD3AQ9NVI7 634 aa11.54□□□□□ -0.56
SRRT-206ENST00000460194 POU2F3Q9UKI9 436 aa11.54□□□□□ -0.56
SRRT-206ENST00000460194 TRAPPC4Q9Y296 219 aa11.54□□□□□ -0.56
SRRT-206ENST00000460194 IGHV4-61A0A0C4DH41 118 aa11.53□□□□□ -0.56
SRRT-206ENST00000460194 DUXAA6NLW8 204 aa11.53□□□□□ -0.56
SRRT-206ENST00000460194 CCT8L1PA6NM43 557 aa11.53□□□□□ -0.56
SRRT-206ENST00000460194 CLDN24A6NM45 220 aa11.53□□□□□ -0.56
SRRT-206ENST00000460194 ATP6V1G2-DDX39BF2Z307 99 aa11.53□□□□□ -0.56
SRRT-206ENST00000460194 MRPL33O75394 65 aaKnown RBP11.53□□□□□ -0.56
SRRT-206ENST00000460194 CYP7B1O75881 506 aa11.53□□□□□ -0.56
SRRT-206ENST00000460194 SLU7O95391 586 aaKnown RBP11.53□□□□□ -0.56
SRRT-206ENST00000460194 G6PDP11413 515 aa11.53□□□□□ -0.56
SRRT-206ENST00000460194 FKBP2P26885 142 aaKnown RBP11.53□□□□□ -0.56
SRRT-206ENST00000460194 GZMKP49863 264 aa11.53□□□□□ -0.56
SRRT-206ENST00000460194 CLDN8P56748 225 aa11.53□□□□□ -0.56
SRRT-206ENST00000460194 TSPO2Q5TGU0 170 aa11.53□□□□□ -0.56
SRRT-206ENST00000460194 FRRS1Q6ZNA5 592 aa11.53□□□□□ -0.56
SRRT-206ENST00000460194 EIF3MQ7L2H7 374 aaKnown RBP11.53□□□□□ -0.56
SRRT-206ENST00000460194 GRINAQ7Z429 371 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms