RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 ETV2O00321 342 aaPredicted RBP16.67■□□□□ 0.26
USP39-209ENST00000458268 CASKO14936 926 aa16.67■□□□□ 0.26
USP39-209ENST00000458268 PRKD3O94806 890 aa16.67■□□□□ 0.26
USP39-209ENST00000458268 THBS1P07996 1170 aa16.67■□□□□ 0.26
USP39-209ENST00000458268 CD8BP10966 210 aa16.67■□□□□ 0.26
USP39-209ENST00000458268 SLC6A2P23975 617 aa16.67■□□□□ 0.26
USP39-209ENST00000458268 CXCR1P25024 350 aa16.67■□□□□ 0.26
USP39-209ENST00000458268 HTR3AP46098 478 aa16.67■□□□□ 0.26
USP39-209ENST00000458268 RAC3P60763 192 aa16.67■□□□□ 0.26
USP39-209ENST00000458268 CSNK2A1P68400 391 aaPredicted RBP16.67■□□□□ 0.26
USP39-209ENST00000458268 RASGEF1BQ0VAM2 473 aa16.67■□□□□ 0.26
USP39-209ENST00000458268 KLF10Q13118 480 aa16.67■□□□□ 0.26
USP39-209ENST00000458268 RNPS1Q15287 305 aaKnown RBP16.67■□□□□ 0.26
USP39-209ENST00000458268 RUNDC3AQ59EK9 446 aa16.67■□□□□ 0.26
USP39-209ENST00000458268 RNF220Q5VTB9 566 aa16.67■□□□□ 0.26
USP39-209ENST00000458268 REEP3Q6NUK4 255 aa16.67■□□□□ 0.26
USP39-209ENST00000458268 NUFIP2Q7Z417 695 aaKnown RBP16.67■□□□□ 0.26
USP39-209ENST00000458268 STK32CQ86UX6 486 aa16.67■□□□□ 0.26
USP39-209ENST00000458268 ADGRG3Q86Y34 549 aa16.67■□□□□ 0.26
USP39-209ENST00000458268 KRT73Q86Y46 540 aa16.67■□□□□ 0.26
USP39-209ENST00000458268 RNF217Q8TC41 542 aa16.67■□□□□ 0.26
USP39-209ENST00000458268 DDIT4LQ96D03 193 aa16.67■□□□□ 0.26
USP39-209ENST00000458268 ZHX1-C8orf76Q96EF9 292 aa16.67■□□□□ 0.26
USP39-209ENST00000458268 MED18Q9BUE0 208 aa16.67■□□□□ 0.26
USP39-209ENST00000458268 GLRX2Q9NS18 164 aa16.67■□□□□ 0.26
USP39-209ENST00000458268 KLHL13Q9P2N7 655 aa16.67■□□□□ 0.26
USP39-209ENST00000458268 NDRG3Q9UGV2 375 aa16.67■□□□□ 0.26
USP39-209ENST00000458268 OSGIN1Q9UJX0 560 aa16.67■□□□□ 0.26
USP39-209ENST00000458268 SLC13A4Q9UKG4 626 aa16.67■□□□□ 0.26
USP39-209ENST00000458268 ANGPT4Q9Y264 503 aa16.67■□□□□ 0.26
USP39-209ENST00000458268 APCP25054 2843 aa16.67■□□□□ 0.26
USP39-209ENST00000458268 A6NNC1 897 aa16.66■□□□□ 0.26
USP39-209ENST00000458268 SMAD9O15198 467 aaKnown RBP16.66■□□□□ 0.26
USP39-209ENST00000458268 CGAP01215 116 aa16.66■□□□□ 0.26
USP39-209ENST00000458268 EPXP11678 715 aa16.66■□□□□ 0.26
USP39-209ENST00000458268 BMP2P12643 396 aa16.66■□□□□ 0.26
USP39-209ENST00000458268 FBN2P35556 2912 aa16.66■□□□□ 0.26
USP39-209ENST00000458268 SLC1A3P43003 542 aa16.66■□□□□ 0.26
USP39-209ENST00000458268 BNIP2Q12982 314 aa16.66■□□□□ 0.26
USP39-209ENST00000458268 GUSBP1Q15486 140 aa16.66■□□□□ 0.26
USP39-209ENST00000458268 TMPPEQ6ZT21 453 aa16.66■□□□□ 0.26
USP39-209ENST00000458268 CDH24Q86UP0 819 aa16.66■□□□□ 0.26
USP39-209ENST00000458268 SNX32Q86XE0 403 aa16.66■□□□□ 0.26
USP39-209ENST00000458268 ANKRD27Q96NW4 1050 aa16.66■□□□□ 0.26
USP39-209ENST00000458268 CLEC4MQ9H2X3 399 aaPredicted RBP16.66■□□□□ 0.26
USP39-209ENST00000458268 ARMCX1Q9P291 453 aa16.66■□□□□ 0.26
USP39-209ENST00000458268 KLHL9Q9P2J3 617 aa16.66■□□□□ 0.26
USP39-209ENST00000458268 RPS6KB2Q9UBS0 482 aa16.66■□□□□ 0.26
USP39-209ENST00000458268 DCHS2Q6V1P9 2916 aa16.66■□□□□ 0.26
USP39-209ENST00000458268 LOC100653049A0A140TA62 436 aa16.65■□□□□ 0.26
USP39-209ENST00000458268 MRASO14807 208 aa16.65■□□□□ 0.26
USP39-209ENST00000458268 ATP8B1O43520 1251 aa16.65■□□□□ 0.26
USP39-209ENST00000458268 KRT34O76011 436 aa16.65■□□□□ 0.26
USP39-209ENST00000458268 OPN1SWP03999 348 aa16.65■□□□□ 0.26
USP39-209ENST00000458268 PRAMEF8Q5VWM4 474 aa16.65■□□□□ 0.26
USP39-209ENST00000458268 PRAMEF7Q5VXH5 474 aa16.65■□□□□ 0.26
USP39-209ENST00000458268 AP1ARQ63HQ0 302 aa16.65■□□□□ 0.26
USP39-209ENST00000458268 REP15Q6BDI9 236 aa16.65■□□□□ 0.26
USP39-209ENST00000458268 WBP2NLQ6ICG8 309 aa16.65■□□□□ 0.26
USP39-209ENST00000458268 DPP10Q8N608 796 aa16.65■□□□□ 0.26
USP39-209ENST00000458268 ZNF300Q96RE9 604 aaPredicted RBP16.65■□□□□ 0.26
USP39-209ENST00000458268 ZNF607Q96SK3 696 aa16.65■□□□□ 0.26
USP39-209ENST00000458268 SPATA5L1Q9BVQ7 753 aa16.65■□□□□ 0.26
USP39-209ENST00000458268 CCDC134Q9H6E4 229 aa16.65■□□□□ 0.26
USP39-209ENST00000458268 BCL2L10Q9HD36 194 aa16.65■□□□□ 0.26
USP39-209ENST00000458268 SAR1AQ9NR31 198 aa16.65■□□□□ 0.26
USP39-209ENST00000458268 KLHL14Q9P2G3 628 aa16.65■□□□□ 0.26
USP39-209ENST00000458268 CAPN7Q9Y6W3 813 aa16.65■□□□□ 0.26
USP39-209ENST00000458268 CREBBPQ92793 2442 aa16.65■□□□□ 0.26
USP39-209ENST00000458268 POLQO75417 2590 aa16.64■□□□□ 0.25
USP39-209ENST00000458268 ZC3H12DA2A288 527 aaKnown RBP16.64■□□□□ 0.25
USP39-209ENST00000458268 C16orf97H3BN30 126 aa16.64■□□□□ 0.25
USP39-209ENST00000458268 FBP2O00757 339 aa16.64■□□□□ 0.25
USP39-209ENST00000458268 CTAG2O75638 210 aa16.64■□□□□ 0.25
USP39-209ENST00000458268 YES1P07947 543 aa16.64■□□□□ 0.25
USP39-209ENST00000458268 GPX2P18283 190 aa16.64■□□□□ 0.25
USP39-209ENST00000458268 UGT2B10P36537 528 aa16.64■□□□□ 0.25
USP39-209ENST00000458268 ACAA2P42765 397 aaKnown RBP16.64■□□□□ 0.25
USP39-209ENST00000458268 NCALDP61601 193 aa16.64■□□□□ 0.25
USP39-209ENST00000458268 MAPRE2Q15555 327 aa16.64■□□□□ 0.25
USP39-209ENST00000458268 TRMT5Q32P41 509 aaKnown RBP16.64■□□□□ 0.25
USP39-209ENST00000458268 GLIPR1L2Q4G1C9 344 aa16.64■□□□□ 0.25
USP39-209ENST00000458268 ARMC8Q8IUR7 673 aa16.64■□□□□ 0.25
USP39-209ENST00000458268 SLC43A2Q8N370 569 aa16.64■□□□□ 0.25
USP39-209ENST00000458268 POU5F2Q8N7G0 328 aa16.64■□□□□ 0.25
USP39-209ENST00000458268 SMYD1Q8NB12 490 aa16.64■□□□□ 0.25
USP39-209ENST00000458268 C11orf65Q8NCR3 313 aa16.64■□□□□ 0.25
USP39-209ENST00000458268 HIPK4Q8NE63 616 aa16.64■□□□□ 0.25
USP39-209ENST00000458268 C10orf82Q8WW14 230 aa16.64■□□□□ 0.25
USP39-209ENST00000458268 WFIKKN1Q96NZ8 548 aa16.64■□□□□ 0.25
USP39-209ENST00000458268 PLSCR4Q9NRQ2 329 aa16.64■□□□□ 0.25
USP39-209ENST00000458268 ELOVL5Q9NYP7 299 aa16.64■□□□□ 0.25
USP39-209ENST00000458268 CHST2Q9Y4C5 530 aa16.64■□□□□ 0.25
USP39-209ENST00000458268 FREM1Q5H8C1 2179 aa16.63■□□□□ 0.25
USP39-209ENST00000458268 TPST1O60507 370 aa16.63■□□□□ 0.25
USP39-209ENST00000458268 ETS2P15036 469 aa16.63■□□□□ 0.25
USP39-209ENST00000458268 CCKARP32238 428 aa16.63■□□□□ 0.25
USP39-209ENST00000458268 RGS8P57771 180 aaPredicted RBP16.63■□□□□ 0.25
USP39-209ENST00000458268 CYLC2Q14093 348 aaPredicted RBP16.63■□□□□ 0.25
USP39-209ENST00000458268 TSC22D1Q15714 1073 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms