RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 RPS4XP62701 263 aaKnown RBP13.95□□□□□ -0.18
CHCHD3-204ENST00000457942 CHRNEQ04844 493 aa13.95□□□□□ -0.18
CHCHD3-204ENST00000457942 TNK1Q13470 666 aa13.95□□□□□ -0.18
CHCHD3-204ENST00000457942 OGFOD2Q6N063 350 aa13.95□□□□□ -0.18
CHCHD3-204ENST00000457942 ZNF621Q6ZSS3 439 aa13.95□□□□□ -0.18
CHCHD3-204ENST00000457942 GRINAQ7Z429 371 aa13.95□□□□□ -0.18
CHCHD3-204ENST00000457942 SPATA19Q7Z5L4 167 aa13.95□□□□□ -0.18
CHCHD3-204ENST00000457942 FAM71CQ8NEG0 241 aa13.95□□□□□ -0.18
CHCHD3-204ENST00000457942 PNPT1Q8TCS8 783 aaKnown RBP13.95□□□□□ -0.18
CHCHD3-204ENST00000457942 OIT3Q8WWZ8 545 aa13.95□□□□□ -0.18
CHCHD3-204ENST00000457942 FBXW5Q969U6 566 aa13.95□□□□□ -0.18
CHCHD3-204ENST00000457942 GTPBP3Q969Y2 492 aaKnown RBP13.95□□□□□ -0.18
CHCHD3-204ENST00000457942 OR52E6Q96RD3 313 aa13.95□□□□□ -0.18
CHCHD3-204ENST00000457942 USB1Q9BQ65 265 aaKnown RBP13.95□□□□□ -0.18
CHCHD3-204ENST00000457942 TMEM204Q9BSN7 226 aa13.95□□□□□ -0.18
CHCHD3-204ENST00000457942 TMBIM4Q9HC24 238 aa13.95□□□□□ -0.18
CHCHD3-204ENST00000457942 AIG1Q9NVV5 245 aa13.95□□□□□ -0.18
CHCHD3-204ENST00000457942 BTNL2Q9UIR0 455 aa13.95□□□□□ -0.18
CHCHD3-204ENST00000457942 TMEM120BA0PK00 339 aa13.94□□□□□ -0.18
CHCHD3-204ENST00000457942 CLDN24A6NM45 220 aa13.94□□□□□ -0.18
CHCHD3-204ENST00000457942 TRPC5OSA6NMA1 111 aa13.94□□□□□ -0.18
CHCHD3-204ENST00000457942 ZNF724A8MTY0 619 aa13.94□□□□□ -0.18
CHCHD3-204ENST00000457942 ZNF814B7Z6K7 855 aa13.94□□□□□ -0.18
CHCHD3-204ENST00000457942 RNF223E7ERA6 249 aa13.94□□□□□ -0.18
CHCHD3-204ENST00000457942 HMGN4O00479 90 aa13.94□□□□□ -0.18
CHCHD3-204ENST00000457942 SDHDO14521 159 aa13.94□□□□□ -0.18
CHCHD3-204ENST00000457942 DNAJA2O60884 412 aa13.94□□□□□ -0.18
CHCHD3-204ENST00000457942 BCAS1O75363 584 aaPredicted RBP13.94□□□□□ -0.18
CHCHD3-204ENST00000457942 GSNP06396 782 aa13.94□□□□□ -0.18
CHCHD3-204ENST00000457942 PGRP06401 933 aa13.94□□□□□ -0.18
CHCHD3-204ENST00000457942 UQCRBP14927 111 aa13.94□□□□□ -0.18
CHCHD3-204ENST00000457942 EPHA3P29320 983 aa13.94□□□□□ -0.18
CHCHD3-204ENST00000457942 OR2B6P58173 313 aa13.94□□□□□ -0.18
CHCHD3-204ENST00000457942 MAGOHP61326 146 aaKnown RBP13.94□□□□□ -0.18
CHCHD3-204ENST00000457942 KCNJ10P78508 379 aa13.94□□□□□ -0.18
CHCHD3-204ENST00000457942 BSPH1Q075Z2 132 aa13.94□□□□□ -0.18
CHCHD3-204ENST00000457942 VEZF1Q14119 521 aa13.94□□□□□ -0.18
CHCHD3-204ENST00000457942 GNA13Q14344 377 aa13.94□□□□□ -0.18
CHCHD3-204ENST00000457942 PPA1Q15181 289 aa13.94□□□□□ -0.18
CHCHD3-204ENST00000457942 NCMAPQ5T1S8 102 aa13.94□□□□□ -0.18
CHCHD3-204ENST00000457942 ADAM5Q6NVV9 412 aa13.94□□□□□ -0.18
CHCHD3-204ENST00000457942 DNAJC14Q6Y2X3 702 aaPredicted RBP13.94□□□□□ -0.18
CHCHD3-204ENST00000457942 ANKFN1Q8N957 763 aa13.94□□□□□ -0.18
CHCHD3-204ENST00000457942 WDR60Q8WVS4 1066 aa13.94□□□□□ -0.18
CHCHD3-204ENST00000457942 MUCL1Q96DR8 90 aa13.94□□□□□ -0.18
CHCHD3-204ENST00000457942 TEX37Q96LM6 180 aa13.94□□□□□ -0.18
CHCHD3-204ENST00000457942 INPP5KQ9BT40 448 aa13.94□□□□□ -0.18
CHCHD3-204ENST00000457942 SAP130Q9H0E3 1048 aa13.94□□□□□ -0.18
CHCHD3-204ENST00000457942 WDR55Q9H6Y2 383 aaPredicted RBP13.94□□□□□ -0.18
CHCHD3-204ENST00000457942 ING1Q9UK53 422 aaPredicted RBP13.94□□□□□ -0.18
CHCHD3-204ENST00000457942 NOSIPQ9Y314 301 aaKnown RBP13.94□□□□□ -0.18
CHCHD3-204ENST00000457942 ANK2Q01484 3957 aa13.94□□□□□ -0.18
CHCHD3-204ENST00000457942 A0A1W2PP18 115 aa13.93□□□□□ -0.18
CHCHD3-204ENST00000457942 HDAC3O15379 428 aa13.93□□□□□ -0.18
CHCHD3-204ENST00000457942 TMCC2O75069 709 aa13.93□□□□□ -0.18
CHCHD3-204ENST00000457942 IGHV3-9P01782 118 aa13.93□□□□□ -0.18
CHCHD3-204ENST00000457942 GUSBP08236 651 aa13.93□□□□□ -0.18
CHCHD3-204ENST00000457942 NR2F1P10589 423 aa13.93□□□□□ -0.18
CHCHD3-204ENST00000457942 IL7RP16871 459 aa13.93□□□□□ -0.18
CHCHD3-204ENST00000457942 GGT1P19440 569 aa13.93□□□□□ -0.18
CHCHD3-204ENST00000457942 CDKN2CP42773 168 aa13.93□□□□□ -0.18
CHCHD3-204ENST00000457942 IDH2P48735 452 aaKnown RBP13.93□□□□□ -0.18
CHCHD3-204ENST00000457942 LRRC74AQ0VAA2 488 aa13.93□□□□□ -0.18
CHCHD3-204ENST00000457942 SYPL1Q16563 259 aa13.93□□□□□ -0.18
CHCHD3-204ENST00000457942 ATG16L1Q676U5 607 aa13.93□□□□□ -0.18
CHCHD3-204ENST00000457942 ABLIM2Q6H8Q1 611 aa13.93□□□□□ -0.18
CHCHD3-204ENST00000457942 MTDHQ86UE4 582 aaKnown RBP13.93□□□□□ -0.18
CHCHD3-204ENST00000457942 KBTBD8Q8NFY9 601 aa13.93□□□□□ -0.18
CHCHD3-204ENST00000457942 PIGXQ8TBF5 258 aa13.93□□□□□ -0.18
CHCHD3-204ENST00000457942 CNOT9Q92600 299 aaKnown RBP13.93□□□□□ -0.18
CHCHD3-204ENST00000457942 APH1AQ96BI3 265 aa13.93□□□□□ -0.18
CHCHD3-204ENST00000457942 ZG16BQ96DA0 208 aa13.93□□□□□ -0.18
CHCHD3-204ENST00000457942 TRNT1Q96Q11 434 aaKnown RBP13.93□□□□□ -0.18
CHCHD3-204ENST00000457942 CCDC106Q9BWC9 280 aa13.93□□□□□ -0.18
CHCHD3-204ENST00000457942 OR11A1Q9GZK7 315 aa13.93□□□□□ -0.18
CHCHD3-204ENST00000457942 EXOSC3Q9NQT5 275 aaKnown RBP13.93□□□□□ -0.18
CHCHD3-204ENST00000457942 THAP1Q9NVV9 213 aa13.93□□□□□ -0.18
CHCHD3-204ENST00000457942 NKIRAS1Q9NYS0 192 aa13.93□□□□□ -0.18
CHCHD3-204ENST00000457942 LIPT1Q9Y234 373 aa13.93□□□□□ -0.18
CHCHD3-204ENST00000457942 HDGFL3Q9Y3E1 203 aa13.93□□□□□ -0.18
CHCHD3-204ENST00000457942 CIB4A0PJX0 185 aa13.92□□□□□ -0.18
CHCHD3-204ENST00000457942 PRAMEF27A3QJZ7 478 aa13.92□□□□□ -0.18
CHCHD3-204ENST00000457942 RFXANKO14593 260 aa13.92□□□□□ -0.18
CHCHD3-204ENST00000457942 AP3D1O14617 1153 aa13.92□□□□□ -0.18
CHCHD3-204ENST00000457942 RAD51DO75771 328 aa13.92□□□□□ -0.18
CHCHD3-204ENST00000457942 ANP32DO95626 131 aa13.92□□□□□ -0.18
CHCHD3-204ENST00000457942 KRT75O95678 551 aa13.92□□□□□ -0.18
CHCHD3-204ENST00000457942 PMS2P2O95744 297 aa13.92□□□□□ -0.18
CHCHD3-204ENST00000457942 C1QCP02747 245 aa13.92□□□□□ -0.18
CHCHD3-204ENST00000457942 IGHV1-2P23083 117 aa13.92□□□□□ -0.18
CHCHD3-204ENST00000457942 EDNRAP25101 427 aa13.92□□□□□ -0.18
CHCHD3-204ENST00000457942 HTR3AP46098 478 aa13.92□□□□□ -0.18
CHCHD3-204ENST00000457942 TXNL4AP83876 142 aaKnown RBP13.92□□□□□ -0.18
CHCHD3-204ENST00000457942 FAPQ12884 760 aa13.92□□□□□ -0.18
CHCHD3-204ENST00000457942 LRRC74BQ6ZQY2 392 aa13.92□□□□□ -0.18
CHCHD3-204ENST00000457942 ATG4DQ86TL0 474 aaPredicted RBP13.92□□□□□ -0.18
CHCHD3-204ENST00000457942 CMIPQ8IY22 773 aa13.92□□□□□ -0.18
CHCHD3-204ENST00000457942 PIWIL2Q8TC59 973 aaKnown RBP13.92□□□□□ -0.18
CHCHD3-204ENST00000457942 NEUROG1Q92886 237 aa13.92□□□□□ -0.18
CHCHD3-204ENST00000457942 DDIT4LQ96D03 193 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms