RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 TIGARQ9NQ88 270 aa15.31■□□□□ 0.04
CCDC43-202ENST00000457422 KLHL21Q9UJP4 597 aa15.31■□□□□ 0.04
CCDC43-202ENST00000457422 FBXL4Q9UKA2 621 aa15.31■□□□□ 0.04
CCDC43-202ENST00000457422 GMEB2Q9UKD1 530 aa15.31■□□□□ 0.04
CCDC43-202ENST00000457422 GRIP1Q9Y3R0 1128 aa15.31■□□□□ 0.04
CCDC43-202ENST00000457422 A0A1W2PQ09 198 aa15.3■□□□□ 0.04
CCDC43-202ENST00000457422 HTR3EA5X5Y0 456 aa15.3■□□□□ 0.04
CCDC43-202ENST00000457422 RHPN2P1A8MT19 583 aa15.3■□□□□ 0.04
CCDC43-202ENST00000457422 C17orf105B2RV13 164 aa15.3■□□□□ 0.04
CCDC43-202ENST00000457422 IGF2P01344 180 aa15.3■□□□□ 0.04
CCDC43-202ENST00000457422 MTNR1BP49286 362 aa15.3■□□□□ 0.04
CCDC43-202ENST00000457422 ZNF85Q03923 595 aa15.3■□□□□ 0.04
CCDC43-202ENST00000457422 SELENBP1Q13228 472 aa15.3■□□□□ 0.04
CCDC43-202ENST00000457422 ASAH1Q13510 395 aa15.3■□□□□ 0.04
CCDC43-202ENST00000457422 SMAD2Q15796 467 aaKnown RBP15.3■□□□□ 0.04
CCDC43-202ENST00000457422 NRARPQ7Z6K4 114 aa15.3■□□□□ 0.04
CCDC43-202ENST00000457422 OR5M3Q8NGP4 307 aa15.3■□□□□ 0.04
CCDC43-202ENST00000457422 PTPMT1Q8WUK0 201 aaPredicted RBP15.3■□□□□ 0.04
CCDC43-202ENST00000457422 SMPDL3BQ92485 455 aa15.3■□□□□ 0.04
CCDC43-202ENST00000457422 EFHD2Q96C19 240 aaPredicted RBP15.3■□□□□ 0.04
CCDC43-202ENST00000457422 MVB12AQ96EY5 273 aa15.3■□□□□ 0.04
CCDC43-202ENST00000457422 ERMAPQ96PL5 475 aaPredicted RBP15.3■□□□□ 0.04
CCDC43-202ENST00000457422 OR1F2PQ96R84 312 aa15.3■□□□□ 0.04
CCDC43-202ENST00000457422 SACM1LQ9NTJ5 587 aa15.3■□□□□ 0.04
CCDC43-202ENST00000457422 CUTCQ9NTM9 273 aa15.3■□□□□ 0.04
CCDC43-202ENST00000457422 ZMIZ1Q9ULJ6 1067 aa15.3■□□□□ 0.04
CCDC43-202ENST00000457422 RNF215Q9Y6U7 377 aa15.3■□□□□ 0.04
CCDC43-202ENST00000457422 COL5A1P20908 1838 aaPredicted RBP15.3■□□□□ 0.04
CCDC43-202ENST00000457422 C2orf92A0A1B0GVN3 265 aa15.29■□□□□ 0.04
CCDC43-202ENST00000457422 NCR1O76036 304 aa15.29■□□□□ 0.04
CCDC43-202ENST00000457422 CSF3P09919 207 aa15.29■□□□□ 0.04
CCDC43-202ENST00000457422 F8A1P23610 371 aa15.29■□□□□ 0.04
CCDC43-202ENST00000457422 PTBP1P26599 531 aaKnown RBP eCLIP15.29■□□□□ 0.04
CCDC43-202ENST00000457422 RFX2P48378 723 aa15.29■□□□□ 0.04
CCDC43-202ENST00000457422 TPTEP56180 551 aa15.29■□□□□ 0.04
CCDC43-202ENST00000457422 SLC37A1P57057 533 aa15.29■□□□□ 0.04
CCDC43-202ENST00000457422 ISXQ2M1V0 245 aa15.29■□□□□ 0.04
CCDC43-202ENST00000457422 AKAP14Q86UN6 197 aa15.29■□□□□ 0.04
CCDC43-202ENST00000457422 SLITRK4Q8IW52 837 aa15.29■□□□□ 0.04
CCDC43-202ENST00000457422 CELF2-AS1Q8N7Q2 184 aa15.29■□□□□ 0.04
CCDC43-202ENST00000457422 ZNF321PQ8N8H1 164 aa15.29■□□□□ 0.04
CCDC43-202ENST00000457422 SENP5Q96HI0 755 aaPredicted RBP15.29■□□□□ 0.04
CCDC43-202ENST00000457422 YIPF2Q9BWQ6 316 aa15.29■□□□□ 0.04
CCDC43-202ENST00000457422 RNF32Q9H0A6 362 aa15.29■□□□□ 0.04
CCDC43-202ENST00000457422 NPAP1Q9NZP6 1156 aa15.29■□□□□ 0.04
CCDC43-202ENST00000457422 NOX1Q9Y5S8 564 aa15.29■□□□□ 0.04
CCDC43-202ENST00000457422 NUP210LQ5VU65 1888 aa15.29■□□□□ 0.04
CCDC43-202ENST00000457422 DVL2O14641 736 aa15.29■□□□□ 0.04
CCDC43-202ENST00000457422 TMCC2O75069 709 aa15.29■□□□□ 0.04
CCDC43-202ENST00000457422 PIAS2O75928 621 aa15.29■□□□□ 0.04
CCDC43-202ENST00000457422 GYPBP06028 91 aa15.29■□□□□ 0.04
CCDC43-202ENST00000457422 IMPDH2P12268 514 aa15.29■□□□□ 0.04
CCDC43-202ENST00000457422 PPICP45877 212 aa15.29■□□□□ 0.04
CCDC43-202ENST00000457422 GGTLC2Q14390 218 aa15.29■□□□□ 0.04
CCDC43-202ENST00000457422 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.29■□□□□ 0.04
CCDC43-202ENST00000457422 MZT2AQ6P582 158 aa15.29■□□□□ 0.04
CCDC43-202ENST00000457422 DPY19L2P2Q6ZN68 376 aa15.29■□□□□ 0.04
CCDC43-202ENST00000457422 SPATC1Q76KD6 591 aa15.29■□□□□ 0.04
CCDC43-202ENST00000457422 VASH1Q7L8A9 365 aaPredicted RBP15.29■□□□□ 0.04
CCDC43-202ENST00000457422 GATSQ8NAP1 163 aa15.29■□□□□ 0.04
CCDC43-202ENST00000457422 ZNF527Q8NB42 609 aa15.29■□□□□ 0.04
CCDC43-202ENST00000457422 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.29■□□□□ 0.04
CCDC43-202ENST00000457422 SLC46A1Q96NT5 459 aa15.29■□□□□ 0.04
CCDC43-202ENST00000457422 ERVMER34-1Q9H9K5 563 aa15.29■□□□□ 0.04
CCDC43-202ENST00000457422 EXOSC3Q9NQT5 275 aaKnown RBP15.29■□□□□ 0.04
CCDC43-202ENST00000457422 UBQLN4Q9NRR5 601 aa15.29■□□□□ 0.04
CCDC43-202ENST00000457422 PNO1Q9NRX1 252 aaKnown RBP15.29■□□□□ 0.04
CCDC43-202ENST00000457422 COMMD3Q9UBI1 195 aa15.29■□□□□ 0.04
CCDC43-202ENST00000457422 ZNF337Q9Y3M9 751 aa15.29■□□□□ 0.04
CCDC43-202ENST00000457422 IGKV3D-11A0A0A0MRZ8 115 aa15.28■□□□□ 0.04
CCDC43-202ENST00000457422 TMEM150CB9EJG8 249 aa15.28■□□□□ 0.04
CCDC43-202ENST00000457422 MCIDASD6RGH6 385 aa15.28■□□□□ 0.04
CCDC43-202ENST00000457422 LRRN3E7EW58 273 aa15.28■□□□□ 0.04
CCDC43-202ENST00000457422 ARPC3O15145 178 aa15.28■□□□□ 0.04
CCDC43-202ENST00000457422 IL33O95760 270 aa15.28■□□□□ 0.04
CCDC43-202ENST00000457422 HIST1H1CP16403 213 aaKnown RBP15.28■□□□□ 0.04
CCDC43-202ENST00000457422 OR1D4P47884 311 aa15.28■□□□□ 0.04
CCDC43-202ENST00000457422 CSNK1EP49674 416 aaKnown RBP15.28■□□□□ 0.04
CCDC43-202ENST00000457422 OR1D5P58170 312 aa15.28■□□□□ 0.04
CCDC43-202ENST00000457422 RPS4XP62701 263 aaKnown RBP15.28■□□□□ 0.04
CCDC43-202ENST00000457422 RIN1Q13671 783 aa15.28■□□□□ 0.04
CCDC43-202ENST00000457422 CARTPTQ16568 116 aa15.28■□□□□ 0.04
CCDC43-202ENST00000457422 FAAH2Q6GMR7 532 aa15.28■□□□□ 0.04
CCDC43-202ENST00000457422 TTLL10Q6ZVT0 673 aa15.28■□□□□ 0.04
CCDC43-202ENST00000457422 LRRC17Q8N6Y2 441 aa15.28■□□□□ 0.04
CCDC43-202ENST00000457422 POMGNT2Q8NAT1 580 aa15.28■□□□□ 0.04
CCDC43-202ENST00000457422 OR52E2Q8NGJ4 325 aa15.28■□□□□ 0.04
CCDC43-202ENST00000457422 SMAP2Q8WU79 429 aaPredicted RBP15.28■□□□□ 0.04
CCDC43-202ENST00000457422 ACOT12Q8WYK0 555 aa15.28■□□□□ 0.04
CCDC43-202ENST00000457422 CLIP3Q96DZ5 547 aa15.28■□□□□ 0.04
CCDC43-202ENST00000457422 C4orf36Q96KX1 117 aa15.28■□□□□ 0.04
CCDC43-202ENST00000457422 LRRN3Q9H3W5 708 aa15.28■□□□□ 0.04
CCDC43-202ENST00000457422 PPP1R3EQ9H7J1 279 aa15.28■□□□□ 0.04
CCDC43-202ENST00000457422 SPAG17Q6Q759 2223 aa15.28■□□□□ 0.04
CCDC43-202ENST00000457422 TMEM265A0A087WTH1 108 aa15.28■□□□□ 0.04
CCDC43-202ENST00000457422 A8MUA0 341 aa15.28■□□□□ 0.04
CCDC43-202ENST00000457422 SC5DO75845 299 aa15.28■□□□□ 0.04
CCDC43-202ENST00000457422 OR2B3O76000 313 aa15.28■□□□□ 0.04
CCDC43-202ENST00000457422 OR7A10O76100 309 aa15.28■□□□□ 0.04
CCDC43-202ENST00000457422 CASP3P42574 277 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms