RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 GATA5Q9BWX5 397 aaPredicted RBP5.24□□□□□ -1.57
HLA-DPA3-207ENST00000454398 ACTRT3Q9BYD9 372 aa5.24□□□□□ -1.57
HLA-DPA3-207ENST00000454398 NARFLQ9H6Q4 476 aa5.24□□□□□ -1.57
HLA-DPA3-207ENST00000454398 LPAR2Q9HBW0 351 aa5.24□□□□□ -1.57
HLA-DPA3-207ENST00000454398 SLC7A10Q9NS82 523 aa5.24□□□□□ -1.57
HLA-DPA3-207ENST00000454398 ACSS1Q9NUB1 689 aaPredicted RBP5.24□□□□□ -1.57
HLA-DPA3-207ENST00000454398 ASB6Q9NWX5 421 aa5.24□□□□□ -1.57
HLA-DPA3-207ENST00000454398 TAS2R16Q9NYV7 291 aa5.24□□□□□ -1.57
HLA-DPA3-207ENST00000454398 EMC3Q9P0I2 261 aa5.24□□□□□ -1.57
HLA-DPA3-207ENST00000454398 DTNAQ9Y4J8 743 aa5.24□□□□□ -1.57
HLA-DPA3-207ENST00000454398 ACTL7BQ9Y614 415 aa5.24□□□□□ -1.57
HLA-DPA3-207ENST00000454398 PKD1L1Q8TDX9 2849 aa5.23□□□□□ -1.57
HLA-DPA3-207ENST00000454398 IGKV3D-15A0A087WSY6 115 aa5.23□□□□□ -1.57
HLA-DPA3-207ENST00000454398 IGHV1-18A0A0C4DH31 117 aa5.23□□□□□ -1.57
HLA-DPA3-207ENST00000454398 GOLGA8QA0A0J9YX86 632 aa5.23□□□□□ -1.57
HLA-DPA3-207ENST00000454398 GOLGA8OA6NCC3 632 aa5.23□□□□□ -1.57
HLA-DPA3-207ENST00000454398 TTC36A6NLP5 189 aa5.23□□□□□ -1.57
HLA-DPA3-207ENST00000454398 ZNF724A8MTY0 619 aa5.23□□□□□ -1.57
HLA-DPA3-207ENST00000454398 VWC2LB2RUY7 222 aa5.23□□□□□ -1.57
HLA-DPA3-207ENST00000454398 GOLGA8NF8WBI6 632 aa5.23□□□□□ -1.57
HLA-DPA3-207ENST00000454398 LYNX1G3V0Z9 82 aa5.23□□□□□ -1.57
HLA-DPA3-207ENST00000454398 SLC28A1O00337 649 aa5.23□□□□□ -1.57
HLA-DPA3-207ENST00000454398 NR5A2O00482 541 aa5.23□□□□□ -1.57
HLA-DPA3-207ENST00000454398 UGT2B17O75795 530 aa5.23□□□□□ -1.57
HLA-DPA3-207ENST00000454398 PGM3O95394 542 aa5.23□□□□□ -1.57
HLA-DPA3-207ENST00000454398 LGI1O95970 557 aa5.23□□□□□ -1.57
HLA-DPA3-207ENST00000454398 TGFAP01135 160 aa5.23□□□□□ -1.57
HLA-DPA3-207ENST00000454398 IFI6P09912 130 aa5.23□□□□□ -1.57
HLA-DPA3-207ENST00000454398 LYNX1P0DP58 116 aa5.23□□□□□ -1.57
HLA-DPA3-207ENST00000454398 CPA3P15088 417 aa5.23□□□□□ -1.57
HLA-DPA3-207ENST00000454398 PRPH2P23942 346 aa5.23□□□□□ -1.57
HLA-DPA3-207ENST00000454398 PTAFRP25105 342 aa5.23□□□□□ -1.57
HLA-DPA3-207ENST00000454398 ASMTP46597 345 aa5.23□□□□□ -1.57
HLA-DPA3-207ENST00000454398 EFNA4P52798 201 aa5.23□□□□□ -1.57
HLA-DPA3-207ENST00000454398 ATP12AP54707 1039 aa5.23□□□□□ -1.57
HLA-DPA3-207ENST00000454398 OR2B6P58173 313 aa5.23□□□□□ -1.57
HLA-DPA3-207ENST00000454398 PHC1P78364 1004 aa5.23□□□□□ -1.57
HLA-DPA3-207ENST00000454398 LSM11P83369 360 aaKnown RBP eCLIP5.23□□□□□ -1.57
HLA-DPA3-207ENST00000454398 GABRA6Q16445 453 aa5.23□□□□□ -1.57
HLA-DPA3-207ENST00000454398 WHAMMP3Q1A5X7 153 aa5.23□□□□□ -1.57
HLA-DPA3-207ENST00000454398 MST1LQ2TV78 715 aa5.23□□□□□ -1.57
HLA-DPA3-207ENST00000454398 PGS1Q32NB8 556 aa5.23□□□□□ -1.57
HLA-DPA3-207ENST00000454398 IQCCQ4KMZ1 466 aa5.23□□□□□ -1.57
HLA-DPA3-207ENST00000454398 XKR7Q5GH72 579 aa5.23□□□□□ -1.57
HLA-DPA3-207ENST00000454398 SLC25A53Q5H9E4 307 aa5.23□□□□□ -1.57
HLA-DPA3-207ENST00000454398 OR4F3Q6IEY1 312 aa5.23□□□□□ -1.57
HLA-DPA3-207ENST00000454398 EMBQ6PCB8 327 aa5.23□□□□□ -1.57
HLA-DPA3-207ENST00000454398 KLHL17Q6TDP4 642 aa5.23□□□□□ -1.57
HLA-DPA3-207ENST00000454398 DNAJC14Q6Y2X3 702 aaPredicted RBP5.23□□□□□ -1.57
HLA-DPA3-207ENST00000454398 TMPPEQ6ZT21 453 aa5.23□□□□□ -1.57
HLA-DPA3-207ENST00000454398 LINGO2Q7L985 606 aa5.23□□□□□ -1.57
HLA-DPA3-207ENST00000454398 C16orf62Q7Z3J2 963 aa5.23□□□□□ -1.57
HLA-DPA3-207ENST00000454398 MTERF4Q7Z6M4 381 aaKnown RBP5.23□□□□□ -1.57
HLA-DPA3-207ENST00000454398 ZNF563Q8TA94 476 aa5.23□□□□□ -1.57
HLA-DPA3-207ENST00000454398 CNOT9Q92600 299 aaKnown RBP5.23□□□□□ -1.57
HLA-DPA3-207ENST00000454398 SLC35G5Q96KT7 338 aa5.23□□□□□ -1.57
HLA-DPA3-207ENST00000454398 ZNF385AQ96PM9 386 aaKnown RBP5.23□□□□□ -1.57
HLA-DPA3-207ENST00000454398 SDF2Q99470 211 aa5.23□□□□□ -1.57
HLA-DPA3-207ENST00000454398 CCDC106Q9BWC9 280 aa5.23□□□□□ -1.57
HLA-DPA3-207ENST00000454398 TXLNGYQ9BZA5 131 aa5.23□□□□□ -1.57
HLA-DPA3-207ENST00000454398 ZNF350Q9GZX5 532 aa5.23□□□□□ -1.57
HLA-DPA3-207ENST00000454398 OR51I1Q9H343 314 aa5.23□□□□□ -1.57
HLA-DPA3-207ENST00000454398 TPK1Q9H3S4 243 aa5.23□□□□□ -1.57
HLA-DPA3-207ENST00000454398 GP6Q9HCN6 339 aa5.23□□□□□ -1.57
HLA-DPA3-207ENST00000454398 SLC17A5Q9NRA2 495 aa5.23□□□□□ -1.57
HLA-DPA3-207ENST00000454398 OXSMQ9NWU1 459 aa5.23□□□□□ -1.57
HLA-DPA3-207ENST00000454398 SLC17A7Q9P2U7 560 aa5.23□□□□□ -1.57
HLA-DPA3-207ENST00000454398 LPAR3Q9UBY5 353 aa5.23□□□□□ -1.57
HLA-DPA3-207ENST00000454398 CHRNA9Q9UGM1 479 aa5.23□□□□□ -1.57
HLA-DPA3-207ENST00000454398 ATP6V1HQ9UI12 483 aa5.23□□□□□ -1.57
HLA-DPA3-207ENST00000454398 FKBP7Q9Y680 259 aa5.23□□□□□ -1.57
HLA-DPA3-207ENST00000454398 WNK2Q9Y3S1 2297 aa5.23□□□□□ -1.57
HLA-DPA3-207ENST00000454398 A0A096LPE4 126 aa5.22□□□□□ -1.57
HLA-DPA3-207ENST00000454398 A0A1W2PPZ6 126 aa5.22□□□□□ -1.57
HLA-DPA3-207ENST00000454398 TMEM72A0PK05 275 aa5.22□□□□□ -1.57
HLA-DPA3-207ENST00000454398 PRAMEF27A3QJZ7 478 aa5.22□□□□□ -1.57
HLA-DPA3-207ENST00000454398 ZNF503-AS2A6NEH8 195 aa5.22□□□□□ -1.57
HLA-DPA3-207ENST00000454398 PDLIM1O00151 329 aa5.22□□□□□ -1.57
HLA-DPA3-207ENST00000454398 ETV2O00321 342 aaPredicted RBP5.22□□□□□ -1.57
HLA-DPA3-207ENST00000454398 COPEO14579 308 aa5.22□□□□□ -1.57
HLA-DPA3-207ENST00000454398 KCNAB3O43448 404 aa5.22□□□□□ -1.57
HLA-DPA3-207ENST00000454398 TBX19O60806 448 aa5.22□□□□□ -1.57
HLA-DPA3-207ENST00000454398 SPAG7O75391 227 aa5.22□□□□□ -1.57
HLA-DPA3-207ENST00000454398 MRPL33O75394 65 aaKnown RBP5.22□□□□□ -1.57
HLA-DPA3-207ENST00000454398 LYPLA1O75608 230 aaPredicted RBP5.22□□□□□ -1.57
HLA-DPA3-207ENST00000454398 AKR7A3O95154 331 aa5.22□□□□□ -1.57
HLA-DPA3-207ENST00000454398 IGFBP1P08833 259 aaPredicted RBP5.22□□□□□ -1.57
HLA-DPA3-207ENST00000454398 OR4A8P0C604 315 aa5.22□□□□□ -1.57
HLA-DPA3-207ENST00000454398 OR12D1P0DN82 309 aa5.22□□□□□ -1.57
HLA-DPA3-207ENST00000454398 G6PDP11413 515 aa5.22□□□□□ -1.57
HLA-DPA3-207ENST00000454398 IMPDH2P12268 514 aa5.22□□□□□ -1.57
HLA-DPA3-207ENST00000454398 KRT4P19013 534 aa5.22□□□□□ -1.57
HLA-DPA3-207ENST00000454398 HNF1AP20823 631 aa5.22□□□□□ -1.57
HLA-DPA3-207ENST00000454398 APEX1P27695 318 aaKnown RBP5.22□□□□□ -1.57
HLA-DPA3-207ENST00000454398 ALDH3A1P30838 453 aa5.22□□□□□ -1.57
HLA-DPA3-207ENST00000454398 CALCRP30988 508 aa5.22□□□□□ -1.57
HLA-DPA3-207ENST00000454398 PGM1P36871 562 aa5.22□□□□□ -1.57
HLA-DPA3-207ENST00000454398 GZMKP49863 264 aa5.22□□□□□ -1.57
HLA-DPA3-207ENST00000454398 PDLIM4P50479 330 aa5.22□□□□□ -1.57
HLA-DPA3-207ENST00000454398 DSCR9P59020 149 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms