RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 RSRC1Q96IZ7 334 aaKnown RBP10.45□□□□□ -0.74
SCN9A-204ENST00000452182 PIP5K1AQ99755 562 aa10.45□□□□□ -0.74
SCN9A-204ENST00000452182 ZNF426Q9BUY5 554 aa10.45□□□□□ -0.74
SCN9A-204ENST00000452182 ANKRD19PQ9H560 264 aa10.45□□□□□ -0.74
SCN9A-204ENST00000452182 YY1AP1Q9H869 796 aa10.45□□□□□ -0.74
SCN9A-204ENST00000452182 CTPS2Q9NRF8 586 aa10.45□□□□□ -0.74
SCN9A-204ENST00000452182 ARMC1Q9NVT9 282 aa10.45□□□□□ -0.74
SCN9A-204ENST00000452182 SELENONQ9NZV5 590 aa10.45□□□□□ -0.74
SCN9A-204ENST00000452182 CHRNA9Q9UGM1 479 aa10.45□□□□□ -0.74
SCN9A-204ENST00000452182 RIMS3Q9UJD0 308 aa10.45□□□□□ -0.74
SCN9A-204ENST00000452182 AURKCQ9UQB9 309 aa10.45□□□□□ -0.74
SCN9A-204ENST00000452182 SLC6A5Q9Y345 797 aa10.45□□□□□ -0.74
SCN9A-204ENST00000452182 TMED7Q9Y3B3 224 aa10.45□□□□□ -0.74
SCN9A-204ENST00000452182 SPIN1Q9Y657 262 aaPredicted RBP10.45□□□□□ -0.74
SCN9A-204ENST00000452182 SPTA1P02549 2419 aa10.45□□□□□ -0.74
SCN9A-204ENST00000452182 ZNF407Q9C0G0 2248 aa10.44□□□□□ -0.74
SCN9A-204ENST00000452182 A0A1B0GTH9 108 aa10.44□□□□□ -0.74
SCN9A-204ENST00000452182 GJE1A6NN92 205 aa10.44□□□□□ -0.74
SCN9A-204ENST00000452182 B8ZZF3 427 aa10.44□□□□□ -0.74
SCN9A-204ENST00000452182 hCG_2039718K7EN88 272 aa10.44□□□□□ -0.74
SCN9A-204ENST00000452182 LYPD3O95274 346 aa10.44□□□□□ -0.74
SCN9A-204ENST00000452182 THY1P04216 161 aa10.44□□□□□ -0.74
SCN9A-204ENST00000452182 PEPDP12955 493 aa10.44□□□□□ -0.74
SCN9A-204ENST00000452182 CPN1P15169 458 aa10.44□□□□□ -0.74
SCN9A-204ENST00000452182 TCEA1P23193 301 aaKnown RBP10.44□□□□□ -0.74
SCN9A-204ENST00000452182 CXCR1P25024 350 aa10.44□□□□□ -0.74
SCN9A-204ENST00000452182 LHX2P50458 406 aa10.44□□□□□ -0.74
SCN9A-204ENST00000452182 CRYZQ08257 329 aaKnown RBP10.44□□□□□ -0.74
SCN9A-204ENST00000452182 C5orf46Q6UWT4 87 aa10.44□□□□□ -0.74
SCN9A-204ENST00000452182 GDF7Q7Z4P5 450 aa10.44□□□□□ -0.74
SCN9A-204ENST00000452182 LILRA2Q8N149 483 aa10.44□□□□□ -0.74
SCN9A-204ENST00000452182 PIK3C3Q8NEB9 887 aa10.44□□□□□ -0.74
SCN9A-204ENST00000452182 OR5M1Q8NGP8 315 aa10.44□□□□□ -0.74
SCN9A-204ENST00000452182 SLCO4A1Q96BD0 722 aa10.44□□□□□ -0.74
SCN9A-204ENST00000452182 DHRS1Q96LJ7 313 aa10.44□□□□□ -0.74
SCN9A-204ENST00000452182 TIMP4Q99727 224 aa10.44□□□□□ -0.74
SCN9A-204ENST00000452182 FNDC11Q9BVV2 318 aa10.44□□□□□ -0.74
SCN9A-204ENST00000452182 CHID1Q9BWS9 393 aa10.44□□□□□ -0.74
SCN9A-204ENST00000452182 EXO5Q9H790 373 aa10.44□□□□□ -0.74
SCN9A-204ENST00000452182 SPRR3Q9UBC9 169 aa10.44□□□□□ -0.74
SCN9A-204ENST00000452182 DNAJC13O75165 2243 aa10.44□□□□□ -0.74
SCN9A-204ENST00000452182 A0A1W2PRQ8 180 aa10.44□□□□□ -0.74
SCN9A-204ENST00000452182 ELOA3DA6NLF2 546 aaPredicted RBP10.44□□□□□ -0.74
SCN9A-204ENST00000452182 H3BML4 177 aa10.44□□□□□ -0.74
SCN9A-204ENST00000452182 J3KTA2 159 aa10.44□□□□□ -0.74
SCN9A-204ENST00000452182 BCKDKO14874 412 aa10.44□□□□□ -0.74
SCN9A-204ENST00000452182 FKBP6O75344 327 aa10.44□□□□□ -0.74
SCN9A-204ENST00000452182 ZNF708P17019 499 aa10.44□□□□□ -0.74
SCN9A-204ENST00000452182 IL11P20809 199 aa10.44□□□□□ -0.74
SCN9A-204ENST00000452182 RBM34P42696 430 aaKnown RBP10.44□□□□□ -0.74
SCN9A-204ENST00000452182 CLDN18P56856 261 aa10.44□□□□□ -0.74
SCN9A-204ENST00000452182 SMIM11AP58511 58 aa10.44□□□□□ -0.74
SCN9A-204ENST00000452182 DGCR6Q14129 220 aa10.44□□□□□ -0.74
SCN9A-204ENST00000452182 ELOA3BQ3SY89 546 aa10.44□□□□□ -0.74
SCN9A-204ENST00000452182 ESPNLQ6ZVH7 1005 aa10.44□□□□□ -0.74
SCN9A-204ENST00000452182 ZNF771Q7L3S4 317 aaPredicted RBP10.44□□□□□ -0.74
SCN9A-204ENST00000452182 ZNF843Q8N446 348 aa10.44□□□□□ -0.74
SCN9A-204ENST00000452182 ST6GALNAC3Q8NDV1 305 aa10.44□□□□□ -0.74
SCN9A-204ENST00000452182 ELOA3Q8NG57 546 aa10.44□□□□□ -0.74
SCN9A-204ENST00000452182 STK35Q8TDR2 534 aa10.44□□□□□ -0.74
SCN9A-204ENST00000452182 PRSS27Q9BQR3 290 aa10.44□□□□□ -0.74
SCN9A-204ENST00000452182 TMEM43Q9BTV4 400 aa10.44□□□□□ -0.74
SCN9A-204ENST00000452182 PRDM14Q9GZV8 571 aa10.44□□□□□ -0.74
SCN9A-204ENST00000452182 NMNAT1Q9HAN9 279 aaPredicted RBP10.44□□□□□ -0.74
SCN9A-204ENST00000452182 MAN2C1Q9NTJ4 1040 aa10.44□□□□□ -0.74
SCN9A-204ENST00000452182 SLC7A7Q9UM01 511 aa10.44□□□□□ -0.74
SCN9A-204ENST00000452182 SHANK1Q9Y566 2161 aa10.43□□□□□ -0.74
SCN9A-204ENST00000452182 TMEM72A0PK05 275 aa10.43□□□□□ -0.74
SCN9A-204ENST00000452182 A8MVM7 634 aa10.43□□□□□ -0.74
SCN9A-204ENST00000452182 ANKRD65E5RJM6 399 aa10.43□□□□□ -0.74
SCN9A-204ENST00000452182 ADAMDEC1O15204 470 aa10.43□□□□□ -0.74
SCN9A-204ENST00000452182 NPIPB7O75200 414 aa10.43□□□□□ -0.74
SCN9A-204ENST00000452182 C1QL1O75973 258 aa10.43□□□□□ -0.74
SCN9A-204ENST00000452182 KRT36O76013 467 aa10.43□□□□□ -0.74
SCN9A-204ENST00000452182 H1F0P07305 194 aaKnown RBP10.43□□□□□ -0.74
SCN9A-204ENST00000452182 POU3F2P20265 443 aaPredicted RBP10.43□□□□□ -0.74
SCN9A-204ENST00000452182 PTGS2P35354 604 aa10.43□□□□□ -0.74
SCN9A-204ENST00000452182 YAP1P46937 504 aaKnown RBP10.43□□□□□ -0.74
SCN9A-204ENST00000452182 HMGA2P52926 109 aa10.43□□□□□ -0.74
SCN9A-204ENST00000452182 HSF1Q00613 529 aa10.43□□□□□ -0.74
SCN9A-204ENST00000452182 GK3PQ14409 553 aa10.43□□□□□ -0.74
SCN9A-204ENST00000452182 TRAM2Q15035 370 aa10.43□□□□□ -0.74
SCN9A-204ENST00000452182 SYT14P1Q58G82 188 aa10.43□□□□□ -0.74
SCN9A-204ENST00000452182 DCST1Q5T197 706 aa10.43□□□□□ -0.74
SCN9A-204ENST00000452182 ZFP1Q6P2D0 407 aa10.43□□□□□ -0.74
SCN9A-204ENST00000452182 FGD2Q7Z6J4 655 aa10.43□□□□□ -0.74
SCN9A-204ENST00000452182 GGNQ86UU5 652 aa10.43□□□□□ -0.74
SCN9A-204ENST00000452182 PM20D2Q8IYS1 436 aa10.43□□□□□ -0.74
SCN9A-204ENST00000452182 DDIT4LQ96D03 193 aa10.43□□□□□ -0.74
SCN9A-204ENST00000452182 WDYHV1Q96HA8 205 aa10.43□□□□□ -0.74
SCN9A-204ENST00000452182 ADGRG7Q96K78 797 aa10.43□□□□□ -0.74
SCN9A-204ENST00000452182 HS6ST2Q96MM7 605 aa10.43□□□□□ -0.74
SCN9A-204ENST00000452182 UCN2Q96RP3 112 aa10.43□□□□□ -0.74
SCN9A-204ENST00000452182 POTEKPQ9BYX7 375 aa10.43□□□□□ -0.74
SCN9A-204ENST00000452182 SLC19A3Q9BZV2 496 aa10.43□□□□□ -0.74
SCN9A-204ENST00000452182 AP4S1Q9Y587 144 aa10.43□□□□□ -0.74
SCN9A-204ENST00000452182 ZFYVE26Q68DK2 2539 aa10.42□□□□□ -0.74
SCN9A-204ENST00000452182 HTR3EA5X5Y0 456 aa10.42□□□□□ -0.74
SCN9A-204ENST00000452182 HNRNPRO43390 633 aaKnown RBP10.42□□□□□ -0.74
SCN9A-204ENST00000452182 DIRAS1O95057 198 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms