RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 BBS1Q8NFJ9 593 aa9.83□□□□□ -0.84
PKP4-206ENST00000452162 C16orf52Q8NHV5 167 aa9.83□□□□□ -0.84
PKP4-206ENST00000452162 SNIP1Q8TAD8 396 aaKnown RBP9.83□□□□□ -0.84
PKP4-206ENST00000452162 ABTB1Q969K4 478 aaPredicted RBP9.83□□□□□ -0.84
PKP4-206ENST00000452162 SLC35B4Q969S0 331 aa9.83□□□□□ -0.84
PKP4-206ENST00000452162 ZNF426Q9BUY5 554 aa9.83□□□□□ -0.84
PKP4-206ENST00000452162 CNPPD1Q9BV87 410 aa9.83□□□□□ -0.84
PKP4-206ENST00000452162 SPRY4Q9C004 299 aa9.83□□□□□ -0.84
PKP4-206ENST00000452162 B3GNT4Q9C0J1 378 aa9.83□□□□□ -0.84
PKP4-206ENST00000452162 ENKD1Q9H0I2 346 aa9.83□□□□□ -0.84
PKP4-206ENST00000452162 OR10A5Q9H207 317 aa9.83□□□□□ -0.84
PKP4-206ENST00000452162 ISYNA1Q9NPH2 558 aa9.83□□□□□ -0.84
PKP4-206ENST00000452162 MEPEQ9NQ76 525 aaPredicted RBP9.83□□□□□ -0.84
PKP4-206ENST00000452162 HINT3Q9NQE9 182 aaKnown RBP9.83□□□□□ -0.84
PKP4-206ENST00000452162 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.83□□□□□ -0.84
PKP4-206ENST00000452162 CBLCQ9ULV8 474 aa9.83□□□□□ -0.84
PKP4-206ENST00000452162 EXOGQ9Y2C4 368 aaKnown RBP9.83□□□□□ -0.84
PKP4-206ENST00000452162 TMEM8BA6NDV4 472 aa9.83□□□□□ -0.84
PKP4-206ENST00000452162 KPNA4O00629 521 aaPredicted RBP9.83□□□□□ -0.84
PKP4-206ENST00000452162 PFDN1O60925 122 aa9.83□□□□□ -0.84
PKP4-206ENST00000452162 MSL3P1P0C860 447 aa9.83□□□□□ -0.84
PKP4-206ENST00000452162 PSMA1P25786 263 aaKnown RBP9.83□□□□□ -0.84
PKP4-206ENST00000452162 PPP5CP53041 499 aa9.83□□□□□ -0.84
PKP4-206ENST00000452162 OR2G6Q5TZ20 316 aa9.83□□□□□ -0.84
PKP4-206ENST00000452162 LIPKQ5VXJ0 399 aa9.83□□□□□ -0.84
PKP4-206ENST00000452162 TUBA3EQ6PEY2 450 aa9.83□□□□□ -0.84
PKP4-206ENST00000452162 SHFQ7M4L6 423 aa9.83□□□□□ -0.84
PKP4-206ENST00000452162 ZNF614Q8N883 585 aa9.83□□□□□ -0.84
PKP4-206ENST00000452162 GRHL3Q8TE85 626 aa9.83□□□□□ -0.84
PKP4-206ENST00000452162 TM9SF4Q92544 642 aa9.83□□□□□ -0.84
PKP4-206ENST00000452162 BPIFA2Q96DR5 249 aa9.83□□□□□ -0.84
PKP4-206ENST00000452162 PTCHD1Q96NR3 888 aa9.83□□□□□ -0.84
PKP4-206ENST00000452162 DCBLD2Q96PD2 775 aa9.83□□□□□ -0.84
PKP4-206ENST00000452162 PELOQ9BRX2 385 aaKnown RBP9.83□□□□□ -0.84
PKP4-206ENST00000452162 ZPBPQ9BS86 351 aa9.83□□□□□ -0.84
PKP4-206ENST00000452162 MROQ9BYG7 248 aa9.83□□□□□ -0.84
PKP4-206ENST00000452162 ULBP3Q9BZM4 244 aa9.83□□□□□ -0.84
PKP4-206ENST00000452162 TRIM2Q9C040 744 aa9.83□□□□□ -0.84
PKP4-206ENST00000452162 C6orf62Q9GZU0 229 aaPredicted RBP9.83□□□□□ -0.84
PKP4-206ENST00000452162 Q9N2J8 555 aa9.83□□□□□ -0.84
PKP4-206ENST00000452162 LANCL2Q9NS86 450 aa9.83□□□□□ -0.84
PKP4-206ENST00000452162 ZMIZ1Q9ULJ6 1067 aa9.83□□□□□ -0.84
PKP4-206ENST00000452162 MED31Q9Y3C7 131 aa9.83□□□□□ -0.84
PKP4-206ENST00000452162 MGAQ8IWI9 3026 aa9.83□□□□□ -0.84
PKP4-206ENST00000452162 STK17BO94768 372 aa9.82□□□□□ -0.84
PKP4-206ENST00000452162 IGHA1P01876 353 aa9.82□□□□□ -0.84
PKP4-206ENST00000452162 OCM2P0CE71 109 aa9.82□□□□□ -0.84
PKP4-206ENST00000452162 OCMP0CE72 109 aaPredicted RBP9.82□□□□□ -0.84
PKP4-206ENST00000452162 CD40LGP29965 261 aa9.82□□□□□ -0.84
PKP4-206ENST00000452162 CD79BP40259 229 aa9.82□□□□□ -0.84
PKP4-206ENST00000452162 EIF2S3P41091 472 aaKnown RBP9.82□□□□□ -0.84
PKP4-206ENST00000452162 RBM34P42696 430 aaKnown RBP9.82□□□□□ -0.84
PKP4-206ENST00000452162 PGDP52209 483 aa9.82□□□□□ -0.84
PKP4-206ENST00000452162 ATP12AP54707 1039 aa9.82□□□□□ -0.84
PKP4-206ENST00000452162 PSMD4P55036 377 aaKnown RBP9.82□□□□□ -0.84
PKP4-206ENST00000452162 SERTAD2Q14140 314 aa9.82□□□□□ -0.84
PKP4-206ENST00000452162 ZSWIM7Q19AV6 140 aa9.82□□□□□ -0.84
PKP4-206ENST00000452162 RPL13AP3Q6NVV1 102 aa9.82□□□□□ -0.84
PKP4-206ENST00000452162 MED25Q71SY5 747 aa9.82□□□□□ -0.84
PKP4-206ENST00000452162 TIPARPQ7Z3E1 657 aaKnown RBP9.82□□□□□ -0.84
PKP4-206ENST00000452162 SNX29P2Q8IUI4 249 aa9.82□□□□□ -0.84
PKP4-206ENST00000452162 LNX2Q8N448 690 aa9.82□□□□□ -0.84
PKP4-206ENST00000452162 BCORP1Q8N888 145 aa9.82□□□□□ -0.84
PKP4-206ENST00000452162 LSMEM1Q8N8F7 131 aa9.82□□□□□ -0.84
PKP4-206ENST00000452162 ZSCAN1Q8NBB4 408 aa9.82□□□□□ -0.84
PKP4-206ENST00000452162 OR52L1Q8NGH7 329 aa9.82□□□□□ -0.84
PKP4-206ENST00000452162 OR9Q1Q8NGQ5 310 aa9.82□□□□□ -0.84
PKP4-206ENST00000452162 OR13C2Q8NGS9 318 aa9.82□□□□□ -0.84
PKP4-206ENST00000452162 ZNF649Q9BS31 505 aa9.82□□□□□ -0.84
PKP4-206ENST00000452162 G6PC3Q9BUM1 346 aa9.82□□□□□ -0.84
PKP4-206ENST00000452162 ASPNQ9BXN1 380 aa9.82□□□□□ -0.84
PKP4-206ENST00000452162 EXOSC4Q9NPD3 245 aaKnown RBP9.82□□□□□ -0.84
PKP4-206ENST00000452162 CHCHD3Q9NX63 227 aaKnown RBP9.82□□□□□ -0.84
PKP4-206ENST00000452162 SIGLEC7Q9Y286 467 aa9.82□□□□□ -0.84
PKP4-206ENST00000452162 ZNF670-ZNF695F2Z2N8 137 aa9.82□□□□□ -0.84
PKP4-206ENST00000452162 STMND1H3BQB6 276 aa9.82□□□□□ -0.84
PKP4-206ENST00000452162 SOCS6O14544 535 aa9.82□□□□□ -0.84
PKP4-206ENST00000452162 SCRG1O75711 98 aa9.82□□□□□ -0.84
PKP4-206ENST00000452162 RCBTB2O95199 551 aa9.82□□□□□ -0.84
PKP4-206ENST00000452162 DLGAP3O95886 979 aa9.82□□□□□ -0.84
PKP4-206ENST00000452162 SOX6P35712 828 aa9.82□□□□□ -0.84
PKP4-206ENST00000452162 SLC1A3P43003 542 aa9.82□□□□□ -0.84
PKP4-206ENST00000452162 TPBGQ13641 420 aa9.82□□□□□ -0.84
PKP4-206ENST00000452162 OXA1LQ15070 435 aa9.82□□□□□ -0.84
PKP4-206ENST00000452162 NNATQ16517 81 aa9.82□□□□□ -0.84
PKP4-206ENST00000452162 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.82□□□□□ -0.84
PKP4-206ENST00000452162 NIPAL3Q6P499 406 aa9.82□□□□□ -0.84
PKP4-206ENST00000452162 LINC00114Q6XXX2 140 aa9.82□□□□□ -0.84
PKP4-206ENST00000452162 THSD4Q6ZMP0 1018 aa9.82□□□□□ -0.84
PKP4-206ENST00000452162 CXXC5Q7LFL8 322 aaKnown RBP9.82□□□□□ -0.84
PKP4-206ENST00000452162 BPHLQ86WA6 291 aaPredicted RBP9.82□□□□□ -0.84
PKP4-206ENST00000452162 DTX1Q86Y01 620 aa9.82□□□□□ -0.84
PKP4-206ENST00000452162 CPOQ8IVL8 374 aa9.82□□□□□ -0.84
PKP4-206ENST00000452162 CMIPQ8IY22 773 aa9.82□□□□□ -0.84
PKP4-206ENST00000452162 SLC38A9Q8NBW4 561 aa9.82□□□□□ -0.84
PKP4-206ENST00000452162 ZNF248Q8NDW4 579 aa9.82□□□□□ -0.84
PKP4-206ENST00000452162 OR4F15Q8NGB8 312 aa9.82□□□□□ -0.84
PKP4-206ENST00000452162 JAM3Q9BX67 310 aa9.82□□□□□ -0.84
PKP4-206ENST00000452162 FN3KQ9H479 309 aa9.82□□□□□ -0.84
PKP4-206ENST00000452162 SIAEQ9HAT2 523 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms