RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 NOSIPQ9Y314 301 aaKnown RBP9.6□□□□□ -0.87
USP1-204ENST00000452143 HDGFL3Q9Y3E1 203 aa9.6□□□□□ -0.87
USP1-204ENST00000452143 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.6□□□□□ -0.875e-6■■■□□ 15.2
USP1-204ENST00000452143 ALPK2Q86TB3 2170 aa9.6□□□□□ -0.87
USP1-204ENST00000452143 IGHV4-30-2A0A087WSY4 118 aa9.59□□□□□ -0.87
USP1-204ENST00000452143 A0A096LNT2 108 aa9.59□□□□□ -0.87
USP1-204ENST00000452143 CENPVL1A0A0U1RR11 272 aa9.59□□□□□ -0.87
USP1-204ENST00000452143 CIB4A0PJX0 185 aa9.59□□□□□ -0.87
USP1-204ENST00000452143 ELOA3DA6NLF2 546 aaPredicted RBP9.59□□□□□ -0.87
USP1-204ENST00000452143 H7C417 338 aa9.59□□□□□ -0.87
USP1-204ENST00000452143 FCMRO60667 390 aa9.59□□□□□ -0.87
USP1-204ENST00000452143 SKAP2O75563 359 aaPredicted RBP9.59□□□□□ -0.87
USP1-204ENST00000452143 RAD51DO75771 328 aa9.59□□□□□ -0.87
USP1-204ENST00000452143 SLU7O95391 586 aaKnown RBP9.59□□□□□ -0.87
USP1-204ENST00000452143 PMS2P2O95744 297 aa9.59□□□□□ -0.87
USP1-204ENST00000452143 FAM157CP0CG43 387 aa9.59□□□□□ -0.87
USP1-204ENST00000452143 G6PDP11413 515 aa9.59□□□□□ -0.87
USP1-204ENST00000452143 SLC25A16P16260 332 aa9.59□□□□□ -0.87
USP1-204ENST00000452143 MATN1P21941 496 aa9.59□□□□□ -0.87
USP1-204ENST00000452143 PGM1P36871 562 aa9.59□□□□□ -0.87
USP1-204ENST00000452143 CLK1P49759 484 aaKnown RBP9.59□□□□□ -0.87
USP1-204ENST00000452143 CLDN8P56748 225 aa9.59□□□□□ -0.87
USP1-204ENST00000452143 IRX1P78414 480 aaPredicted RBP9.59□□□□□ -0.87
USP1-204ENST00000452143 VLDLRP98155 873 aa9.59□□□□□ -0.87
USP1-204ENST00000452143 LOXL1Q08397 574 aaPredicted RBP9.59□□□□□ -0.87
USP1-204ENST00000452143 TMEM249Q2WGJ8 235 aa9.59□□□□□ -0.87
USP1-204ENST00000452143 ELOA3BQ3SY89 546 aa9.59□□□□□ -0.87
USP1-204ENST00000452143 ATAD3BQ5T9A4 648 aa9.59□□□□□ -0.87
USP1-204ENST00000452143 OR7E24Q6IFN5 339 aa9.59□□□□□ -0.87
USP1-204ENST00000452143 ZNF544Q6NX49 715 aa9.59□□□□□ -0.87
USP1-204ENST00000452143 SLC22A25Q6T423 547 aa9.59□□□□□ -0.87
USP1-204ENST00000452143 GRINAQ7Z429 371 aa9.59□□□□□ -0.87
USP1-204ENST00000452143 C6orf120Q7Z4R8 191 aa9.59□□□□□ -0.87
USP1-204ENST00000452143 DEPDC4Q8N2C3 294 aa9.59□□□□□ -0.87
USP1-204ENST00000452143 UBE2J2Q8N2K1 259 aa9.59□□□□□ -0.87
USP1-204ENST00000452143 MUC15Q8N387 334 aa9.59□□□□□ -0.87
USP1-204ENST00000452143 C17orf78Q8N4C9 275 aa9.59□□□□□ -0.87
USP1-204ENST00000452143 ELOA3Q8NG57 546 aa9.59□□□□□ -0.87
USP1-204ENST00000452143 OR10H5Q8NGA6 315 aa9.59□□□□□ -0.87
USP1-204ENST00000452143 OR8J2Q8NGG1 315 aa9.59□□□□□ -0.87
USP1-204ENST00000452143 OR2W6PQ8NHA6 318 aa9.59□□□□□ -0.87
USP1-204ENST00000452143 TMEM158Q8WZ71 300 aa9.59□□□□□ -0.87
USP1-204ENST00000452143 TUBGCP3Q96CW5 907 aa9.59□□□□□ -0.87
USP1-204ENST00000452143 CCDC106Q9BWC9 280 aa9.59□□□□□ -0.87
USP1-204ENST00000452143 EXOSC3Q9NQT5 275 aaKnown RBP9.59□□□□□ -0.87
USP1-204ENST00000452143 TMEM160Q9NX00 188 aa9.59□□□□□ -0.87
USP1-204ENST00000452143 SLC17A7Q9P2U7 560 aa9.59□□□□□ -0.87
USP1-204ENST00000452143 POU2F3Q9UKI9 436 aa9.59□□□□□ -0.87
USP1-204ENST00000452143 MKLN1Q9UL63 735 aa9.59□□□□□ -0.87
USP1-204ENST00000452143 SLC25A15Q9Y619 301 aa9.59□□□□□ -0.87
USP1-204ENST00000452143 CCT8L1PA6NM43 557 aa9.58□□□□□ -0.88
USP1-204ENST00000452143 C9JVG2 144 aa9.58□□□□□ -0.88
USP1-204ENST00000452143 E7EQL1 145 aa9.58□□□□□ -0.88
USP1-204ENST00000452143 MRPL33O75394 65 aaKnown RBP9.58□□□□□ -0.88
USP1-204ENST00000452143 CSF3P09919 207 aa9.58□□□□□ -0.88
USP1-204ENST00000452143 NUDT17P0C025 328 aa9.58□□□□□ -0.88
USP1-204ENST00000452143 TFPIP10646 304 aa9.58□□□□□ -0.88
USP1-204ENST00000452143 BMP4P12644 408 aa9.58□□□□□ -0.88
USP1-204ENST00000452143 CD40P25942 277 aa9.58□□□□□ -0.88
USP1-204ENST00000452143 ARRB2P32121 409 aa9.58□□□□□ -0.88
USP1-204ENST00000452143 HTR3AP46098 478 aa9.58□□□□□ -0.88
USP1-204ENST00000452143 EMX2Q04743 252 aa9.58□□□□□ -0.88
USP1-204ENST00000452143 SPOCK1Q08629 439 aa9.58□□□□□ -0.88
USP1-204ENST00000452143 AP1ARQ63HQ0 302 aa9.58□□□□□ -0.88
USP1-204ENST00000452143 TYW3Q6IPR3 259 aaKnown RBP9.58□□□□□ -0.88
USP1-204ENST00000452143 ZCCHC23Q6ZST2 131 aa9.58□□□□□ -0.88
USP1-204ENST00000452143 PHC2Q8IXK0 858 aa9.58□□□□□ -0.88
USP1-204ENST00000452143 CLECL1Q8IZS7 167 aa9.58□□□□□ -0.88
USP1-204ENST00000452143 FBXL14Q8N1E6 418 aa9.58□□□□□ -0.88
USP1-204ENST00000452143 C1orf162Q8NEQ5 155 aaPredicted RBP9.58□□□□□ -0.88
USP1-204ENST00000452143 OR52N5Q8NH56 324 aa9.58□□□□□ -0.88
USP1-204ENST00000452143 ZNF563Q8TA94 476 aa9.58□□□□□ -0.88
USP1-204ENST00000452143 TCP10LQ8TDR4 215 aa9.58□□□□□ -0.88
USP1-204ENST00000452143 MUS81Q96NY9 551 aa9.58□□□□□ -0.88
USP1-204ENST00000452143 TNFRSF13CQ96RJ3 184 aa9.58□□□□□ -0.88
USP1-204ENST00000452143 INPP5KQ9BT40 448 aa9.58□□□□□ -0.88
USP1-204ENST00000452143 AMBRA1Q9C0C7 1298 aa9.58□□□□□ -0.88
USP1-204ENST00000452143 SAP130Q9H0E3 1048 aa9.58□□□□□ -0.88
USP1-204ENST00000452143 OR51I1Q9H343 314 aa9.58□□□□□ -0.88
USP1-204ENST00000452143 LPAR3Q9UBY5 353 aa9.58□□□□□ -0.88
USP1-204ENST00000452143 LGALS13Q9UHV8 139 aa9.58□□□□□ -0.88
USP1-204ENST00000452143 ZDHHC2Q9UIJ5 367 aa9.58□□□□□ -0.88
USP1-204ENST00000452143 PCDHGB4Q9UN71 923 aa9.58□□□□□ -0.88
USP1-204ENST00000452143 WDR45Q9Y484 360 aa9.58□□□□□ -0.88
USP1-204ENST00000452143 ARFGEF3Q5TH69 2177 aa9.58□□□□□ -0.88
USP1-204ENST00000452143 FAM234BA2RU67 622 aa9.57□□□□□ -0.88
USP1-204ENST00000452143 EIF1BO60739 113 aaKnown RBP9.57□□□□□ -0.88
USP1-204ENST00000452143 IGHV3-9P01782 118 aa9.57□□□□□ -0.88
USP1-204ENST00000452143 MAGEA8P43361 318 aa9.57□□□□□ -0.88
USP1-204ENST00000452143 KHKP50053 298 aa9.57□□□□□ -0.88
USP1-204ENST00000452143 ZNF83P51522 516 aa9.57□□□□□ -0.88
USP1-204ENST00000452143 MAP2K6P52564 334 aa9.57□□□□□ -0.88
USP1-204ENST00000452143 HPCAP84074 193 aa9.57□□□□□ -0.88
USP1-204ENST00000452143 H3F3AP84243 136 aa9.57□□□□□ -0.88
USP1-204ENST00000452143 TGFBR3Q03167 851 aa9.57□□□□□ -0.88
USP1-204ENST00000452143 RAB35Q15286 201 aa9.57□□□□□ -0.88
USP1-204ENST00000452143 GABRA6Q16445 453 aa9.57□□□□□ -0.88
USP1-204ENST00000452143 MAPK14Q16539 360 aa9.57□□□□□ -0.88
USP1-204ENST00000452143 DPY19L1Q2PZI1 675 aa9.57□□□□□ -0.88
USP1-204ENST00000452143 PGS1Q32NB8 556 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms