RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 TRIM13O60858 407 aa10.88□□□□□ -0.67
AC004540.1-204ENST00000449537 KNG1P01042 644 aa10.88□□□□□ -0.67
AC004540.1-204ENST00000449537 CRYAAP02489 173 aa10.88□□□□□ -0.67
AC004540.1-204ENST00000449537 ITGA5P08648 1049 aa10.88□□□□□ -0.67
AC004540.1-204ENST00000449537 SLC7A1P30825 629 aa10.88□□□□□ -0.67
AC004540.1-204ENST00000449537 MPIP34949 423 aa10.88□□□□□ -0.67
AC004540.1-204ENST00000449537 SERPINB4P48594 390 aa10.88□□□□□ -0.67
AC004540.1-204ENST00000449537 GNGT1P63211 74 aa10.88□□□□□ -0.67
AC004540.1-204ENST00000449537 SLC25A3Q00325 362 aa10.88□□□□□ -0.67
AC004540.1-204ENST00000449537 GALNT1Q10472 559 aaPredicted RBP10.88□□□□□ -0.67
AC004540.1-204ENST00000449537 FOXF1Q12946 379 aa10.88□□□□□ -0.67
AC004540.1-204ENST00000449537 BAMBIQ13145 260 aa10.88□□□□□ -0.67
AC004540.1-204ENST00000449537 PCLAFQ15004 111 aa10.88□□□□□ -0.67
AC004540.1-204ENST00000449537 ZNHIT3Q15649 155 aaPredicted RBP10.88□□□□□ -0.67
AC004540.1-204ENST00000449537 PFKFB4Q16877 469 aa10.88□□□□□ -0.67
AC004540.1-204ENST00000449537 ACSM5Q6NUN0 579 aa10.88□□□□□ -0.67
AC004540.1-204ENST00000449537 IKBIPQ70UQ0 350 aa10.88□□□□□ -0.67
AC004540.1-204ENST00000449537 PTGR2Q8N8N7 351 aaPredicted RBP10.88□□□□□ -0.67
AC004540.1-204ENST00000449537 L3MBTL4Q8NA19 623 aa10.88□□□□□ -0.67
AC004540.1-204ENST00000449537 OR4C3Q8NH37 302 aa10.88□□□□□ -0.67
AC004540.1-204ENST00000449537 B4GALNT2Q8NHY0 566 aa10.88□□□□□ -0.67
AC004540.1-204ENST00000449537 FBXO27Q8NI29 283 aa10.88□□□□□ -0.67
AC004540.1-204ENST00000449537 TAF15Q92804 592 aaKnown RBP eCLIP10.88□□□□□ -0.67
AC004540.1-204ENST00000449537 DVL3Q92997 716 aaPredicted RBP10.88□□□□□ -0.67
AC004540.1-204ENST00000449537 EXOSC8Q96B26 276 aaKnown RBP10.88□□□□□ -0.67
AC004540.1-204ENST00000449537 MRGPRX4Q96LA9 322 aa10.88□□□□□ -0.67
AC004540.1-204ENST00000449537 GPA33Q99795 319 aa10.88□□□□□ -0.67
AC004540.1-204ENST00000449537 KLHDC3Q9BQ90 382 aa10.88□□□□□ -0.67
AC004540.1-204ENST00000449537 DYNLRB1Q9NP97 96 aa10.88□□□□□ -0.67
AC004540.1-204ENST00000449537 GIMAP4Q9NUV9 329 aa10.88□□□□□ -0.67
AC004540.1-204ENST00000449537 ZDHHC2Q9UIJ5 367 aa10.88□□□□□ -0.67
AC004540.1-204ENST00000449537 NOSIPQ9Y314 301 aaKnown RBP10.88□□□□□ -0.67
AC004540.1-204ENST00000449537 A0A1W2PNR3 127 aa10.87□□□□□ -0.67
AC004540.1-204ENST00000449537 TMEM114B3SHH9 223 aa10.87□□□□□ -0.67
AC004540.1-204ENST00000449537 G3V2L1 256 aa10.87□□□□□ -0.67
AC004540.1-204ENST00000449537 KLF11O14901 512 aa10.87□□□□□ -0.67
AC004540.1-204ENST00000449537 NPHS1O60500 1241 aa10.87□□□□□ -0.67
AC004540.1-204ENST00000449537 KCNH1O95259 989 aa10.87□□□□□ -0.67
AC004540.1-204ENST00000449537 MPZL1O95297 269 aa10.87□□□□□ -0.67
AC004540.1-204ENST00000449537 BPGMP07738 259 aa10.87□□□□□ -0.67
AC004540.1-204ENST00000449537 RNASE1P07998 156 aaKnown RBP10.87□□□□□ -0.67
AC004540.1-204ENST00000449537 SBK3P0C264 359 aa10.87□□□□□ -0.67
AC004540.1-204ENST00000449537 IMPDH1P20839 514 aa10.87□□□□□ -0.67
AC004540.1-204ENST00000449537 GABRA3P34903 492 aa10.87□□□□□ -0.67
AC004540.1-204ENST00000449537 MDH1P40925 334 aaKnown RBP10.87□□□□□ -0.67
AC004540.1-204ENST00000449537 TMEM33P57088 247 aa10.87□□□□□ -0.67
AC004540.1-204ENST00000449537 TRA2BP62995 288 aaKnown RBP10.87□□□□□ -0.67
AC004540.1-204ENST00000449537 TGFBR3Q03167 851 aa10.87□□□□□ -0.67
AC004540.1-204ENST00000449537 ZNF311Q5JNZ3 666 aa10.87□□□□□ -0.67
AC004540.1-204ENST00000449537 C9orf135Q5VTT2 229 aa10.87□□□□□ -0.67
AC004540.1-204ENST00000449537 KLHL24Q6TFL4 600 aa10.87□□□□□ -0.67
AC004540.1-204ENST00000449537 FAM9CQ8IZT9 166 aa10.87□□□□□ -0.67
AC004540.1-204ENST00000449537 C1orf162Q8NEQ5 155 aaPredicted RBP10.87□□□□□ -0.67
AC004540.1-204ENST00000449537 FBXO30Q8TB52 745 aa10.87□□□□□ -0.67
AC004540.1-204ENST00000449537 TMIGD2Q96BF3 282 aa10.87□□□□□ -0.67
AC004540.1-204ENST00000449537 NSRP1Q9H0G5 558 aaKnown RBP10.87□□□□□ -0.67
AC004540.1-204ENST00000449537 C7orf69Q9H7B7 122 aa10.87□□□□□ -0.67
AC004540.1-204ENST00000449537 IPPKQ9H8X2 491 aa10.87□□□□□ -0.67
AC004540.1-204ENST00000449537 INTS9Q9NV88 658 aaKnown RBP10.87□□□□□ -0.67
AC004540.1-204ENST00000449537 SLC17A7Q9P2U7 560 aa10.87□□□□□ -0.67
AC004540.1-204ENST00000449537 A0A1B0GUS0 222 aa10.86□□□□□ -0.67
AC004540.1-204ENST00000449537 PLPP2O43688 288 aa10.86□□□□□ -0.67
AC004540.1-204ENST00000449537 MRPL33O75394 65 aaKnown RBP10.86□□□□□ -0.67
AC004540.1-204ENST00000449537 OXSR1O95747 527 aaPredicted RBP10.86□□□□□ -0.67
AC004540.1-204ENST00000449537 OTCP00480 354 aa10.86□□□□□ -0.67
AC004540.1-204ENST00000449537 IGKV1D-16P01601 117 aa10.86□□□□□ -0.67
AC004540.1-204ENST00000449537 SERPINE1P05121 402 aa10.86□□□□□ -0.67
AC004540.1-204ENST00000449537 ADRA2AP08913 450 aa10.86□□□□□ -0.67
AC004540.1-204ENST00000449537 NPR2P20594 1047 aa10.86□□□□□ -0.67
AC004540.1-204ENST00000449537 OMGP23515 440 aa10.86□□□□□ -0.67
AC004540.1-204ENST00000449537 COL8A2P25067 703 aa10.86□□□□□ -0.67
AC004540.1-204ENST00000449537 ARL1P40616 181 aaPredicted RBP10.86□□□□□ -0.67
AC004540.1-204ENST00000449537 LCP2Q13094 533 aa10.86□□□□□ -0.67
AC004540.1-204ENST00000449537 GGTA1PQ4G0N0 100 aa10.86□□□□□ -0.67
AC004540.1-204ENST00000449537 CFAP157Q5JU67 520 aa10.86□□□□□ -0.67
AC004540.1-204ENST00000449537 ZNF678Q5SXM1 525 aa10.86□□□□□ -0.67
AC004540.1-204ENST00000449537 DCAF12L2Q5VW00 463 aa10.86□□□□□ -0.67
AC004540.1-204ENST00000449537 FRG2Q64ET8 278 aa10.86□□□□□ -0.67
AC004540.1-204ENST00000449537 ATG16L1Q676U5 607 aa10.86□□□□□ -0.67
AC004540.1-204ENST00000449537 TTC19Q6DKK2 380 aaPredicted RBP10.86□□□□□ -0.67
AC004540.1-204ENST00000449537 FRMD7Q6ZUT3 714 aa10.86□□□□□ -0.67
AC004540.1-204ENST00000449537 RHOUQ7L0Q8 258 aa10.86□□□□□ -0.67
AC004540.1-204ENST00000449537 SPATA21Q7Z572 469 aa10.86□□□□□ -0.67
AC004540.1-204ENST00000449537 NUDCD3Q8IVD9 361 aa10.86□□□□□ -0.67
AC004540.1-204ENST00000449537 MISPQ8IVT2 679 aa10.86□□□□□ -0.67
AC004540.1-204ENST00000449537 ANKRD42Q8N9B4 389 aa10.86□□□□□ -0.67
AC004540.1-204ENST00000449537 OR4F15Q8NGB8 312 aa10.86□□□□□ -0.67
AC004540.1-204ENST00000449537 C1orf147Q96MC9 270 aaPredicted RBP10.86□□□□□ -0.67
AC004540.1-204ENST00000449537 TMEM237Q96Q45 408 aa10.86□□□□□ -0.67
AC004540.1-204ENST00000449537 FRG2BQ96QU4 278 aa10.86□□□□□ -0.67
AC004540.1-204ENST00000449537 ZNF382Q96SR6 550 aa10.86□□□□□ -0.67
AC004540.1-204ENST00000449537 RBM4BQ9BQ04 359 aaKnown RBP10.86□□□□□ -0.67
AC004540.1-204ENST00000449537 KATNB1Q9BVA0 655 aa10.86□□□□□ -0.67
AC004540.1-204ENST00000449537 RSPO3Q9BXY4 272 aaPredicted RBP10.86□□□□□ -0.67
AC004540.1-204ENST00000449537 MALT1Q9UDY8 824 aa10.86□□□□□ -0.67
AC004540.1-204ENST00000449537 PCTPQ9UKL6 214 aa10.86□□□□□ -0.67
AC004540.1-204ENST00000449537 C19orf53Q9UNZ5 99 aaPredicted RBP10.86□□□□□ -0.67
AC004540.1-204ENST00000449537 SLC12A4Q9UP95 1085 aa10.86□□□□□ -0.67
AC004540.1-204ENST00000449537 IGKV3D-15A0A087WSY6 115 aa10.85□□□□□ -0.67
AC004540.1-204ENST00000449537 A0A087WV62 115 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms