RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 NXF2Q9GZY0 626 aaKnown RBP11.53□□□□□ -0.56
UBE3B-204ENST00000449510 ADAM18Q9Y3Q7 739 aa11.53□□□□□ -0.56
UBE3B-204ENST00000449510 TMEM72A0PK05 275 aa11.52□□□□□ -0.56
UBE3B-204ENST00000449510 F13BP05160 661 aa11.52□□□□□ -0.56
UBE3B-204ENST00000449510 CD2P06729 351 aa11.52□□□□□ -0.56
UBE3B-204ENST00000449510 SPARCP09486 303 aa11.52□□□□□ -0.56
UBE3B-204ENST00000449510 MRPL19P49406 292 aaKnown RBP11.52□□□□□ -0.56
UBE3B-204ENST00000449510 ARL4DP49703 201 aa11.52□□□□□ -0.56
UBE3B-204ENST00000449510 FOXK2Q01167 660 aa11.52□□□□□ -0.56
UBE3B-204ENST00000449510 MELKQ14680 651 aa11.52□□□□□ -0.56
UBE3B-204ENST00000449510 PRRT3Q5FWE3 981 aa11.52□□□□□ -0.56
UBE3B-204ENST00000449510 MRPL2Q5T653 305 aaKnown RBP11.52□□□□□ -0.56
UBE3B-204ENST00000449510 KIAA0907Q7Z7F0 614 aaPredicted RBP11.52□□□□□ -0.56
UBE3B-204ENST00000449510 ZNF227Q86WZ6 799 aa11.52□□□□□ -0.56
UBE3B-204ENST00000449510 OR51D1Q8NGF3 324 aa11.52□□□□□ -0.56
UBE3B-204ENST00000449510 TAPBPLQ9BX59 468 aa11.52□□□□□ -0.56
UBE3B-204ENST00000449510 C1QTNF2Q9BXJ5 285 aa11.52□□□□□ -0.56
UBE3B-204ENST00000449510 TRIM2Q9C040 744 aa11.52□□□□□ -0.56
UBE3B-204ENST00000449510 V9GY05 133 aa11.52□□□□□ -0.56
UBE3B-204ENST00000449510 SIPA1L1O43166 1804 aa11.52□□□□□ -0.56
UBE3B-204ENST00000449510 AIFM1O95831 613 aa11.52□□□□□ -0.57
UBE3B-204ENST00000449510 ZNF14P17017 642 aaPredicted RBP11.52□□□□□ -0.57
UBE3B-204ENST00000449510 ATF1P18846 271 aa11.52□□□□□ -0.57
UBE3B-204ENST00000449510 HTR1FP30939 366 aa11.52□□□□□ -0.57
UBE3B-204ENST00000449510 MTNR1BP49286 362 aa11.52□□□□□ -0.57
UBE3B-204ENST00000449510 AGFG1P52594 562 aaKnown RBP11.52□□□□□ -0.57
UBE3B-204ENST00000449510 BTG1P62324 171 aa11.52□□□□□ -0.57
UBE3B-204ENST00000449510 ENPP2Q13822 863 aa11.52□□□□□ -0.57
UBE3B-204ENST00000449510 ELOAQ14241 798 aaKnown RBP11.52□□□□□ -0.57
UBE3B-204ENST00000449510 DEFB110Q30KQ9 67 aa11.52□□□□□ -0.57
UBE3B-204ENST00000449510 ARHGAP40Q5TG30 622 aa11.52□□□□□ -0.57
UBE3B-204ENST00000449510 LAS2Q8IYD9 372 aa11.52□□□□□ -0.57
UBE3B-204ENST00000449510 C12orf76Q8N812 135 aaPredicted RBP11.52□□□□□ -0.57
UBE3B-204ENST00000449510 CCDC107Q8WV48 283 aa11.52□□□□□ -0.57
UBE3B-204ENST00000449510 SLC6A18Q96N87 628 aa11.52□□□□□ -0.57
UBE3B-204ENST00000449510 SLX1AQ9BQ83 275 aa11.52□□□□□ -0.57
UBE3B-204ENST00000449510 TSPAN10Q9H1Z9 355 aaPredicted RBP11.52□□□□□ -0.57
UBE3B-204ENST00000449510 CHMP1AQ9HD42 196 aaPredicted RBP11.52□□□□□ -0.57
UBE3B-204ENST00000449510 FANCFQ9NPI8 374 aa11.52□□□□□ -0.57
UBE3B-204ENST00000449510 LOC105371267A0A1B0GV96 52 aa11.52□□□□□ -0.57
UBE3B-204ENST00000449510 IDSB3KWA1 339 aa11.52□□□□□ -0.57
UBE3B-204ENST00000449510 TACSTD2P09758 323 aa11.52□□□□□ -0.57
UBE3B-204ENST00000449510 ITGB8P26012 769 aa11.52□□□□□ -0.57
UBE3B-204ENST00000449510 AKR1C3P42330 323 aa11.52□□□□□ -0.57
UBE3B-204ENST00000449510 ARFRP1Q13795 201 aa11.52□□□□□ -0.57
UBE3B-204ENST00000449510 RBM39Q14498 530 aaKnown RBP11.52□□□□□ -0.57
UBE3B-204ENST00000449510 OR1Q1Q15612 314 aa11.52□□□□□ -0.57
UBE3B-204ENST00000449510 ZNF542PQ5EBM4 170 aa11.52□□□□□ -0.57
UBE3B-204ENST00000449510 ENPP7Q6UWV6 458 aa11.52□□□□□ -0.57
UBE3B-204ENST00000449510 KIAA1324Q6UXG2 1013 aaKnown RBP11.52□□□□□ -0.57
UBE3B-204ENST00000449510 SLC35D2Q76EJ3 337 aa11.52□□□□□ -0.57
UBE3B-204ENST00000449510 CMIPQ8IY22 773 aa11.52□□□□□ -0.57
UBE3B-204ENST00000449510 OR51S1Q8NGJ8 323 aa11.52□□□□□ -0.57
UBE3B-204ENST00000449510 OR10R2Q8NGX6 335 aa11.52□□□□□ -0.57
UBE3B-204ENST00000449510 STOML3Q8TAV4 291 aa11.52□□□□□ -0.57
UBE3B-204ENST00000449510 C12orf57Q99622 126 aa11.52□□□□□ -0.57
UBE3B-204ENST00000449510 C1QTNF7Q9BXJ2 289 aa11.52□□□□□ -0.57
UBE3B-204ENST00000449510 PCBD2Q9H0N5 130 aa11.52□□□□□ -0.57
UBE3B-204ENST00000449510 UPB1Q9UBR1 384 aa11.52□□□□□ -0.57
UBE3B-204ENST00000449510 A8MVJ9 347 aa11.51□□□□□ -0.57
UBE3B-204ENST00000449510 PEX12O00623 359 aa11.51□□□□□ -0.57
UBE3B-204ENST00000449510 RAB3DO95716 219 aa11.51□□□□□ -0.57
UBE3B-204ENST00000449510 EGFP01133 1207 aa11.51□□□□□ -0.57
UBE3B-204ENST00000449510 RAP2BP61225 183 aa11.51□□□□□ -0.57
UBE3B-204ENST00000449510 DMRTC1Q5HYR2 192 aa11.51□□□□□ -0.57
UBE3B-204ENST00000449510 LCN10Q6JVE6 187 aa11.51□□□□□ -0.57
UBE3B-204ENST00000449510 TMUB2Q71RG4 321 aa11.51□□□□□ -0.57
UBE3B-204ENST00000449510 RHOUQ7L0Q8 258 aa11.51□□□□□ -0.57
UBE3B-204ENST00000449510 IFNL1Q8IU54 200 aa11.51□□□□□ -0.57
UBE3B-204ENST00000449510 LRRC56Q8IYG6 542 aaPredicted RBP11.51□□□□□ -0.57
UBE3B-204ENST00000449510 SENP5Q96HI0 755 aaPredicted RBP11.51□□□□□ -0.57
UBE3B-204ENST00000449510 CASD1Q96PB1 797 aa11.51□□□□□ -0.57
UBE3B-204ENST00000449510 SYT4Q9H2B2 425 aa11.51□□□□□ -0.57
UBE3B-204ENST00000449510 DPEP2Q9H4A9 486 aa11.51□□□□□ -0.57
UBE3B-204ENST00000449510 MTHFD2LQ9H903 347 aaPredicted RBP11.51□□□□□ -0.57
UBE3B-204ENST00000449510 DLL4Q9NR61 685 aa11.51□□□□□ -0.57
UBE3B-204ENST00000449510 LIPT1Q9Y234 373 aa11.51□□□□□ -0.57
UBE3B-204ENST00000449510 COL5A3P25940 1745 aaPredicted RBP11.51□□□□□ -0.57
UBE3B-204ENST00000449510 KRBOX1C9JBD0 128 aa11.51□□□□□ -0.57
UBE3B-204ENST00000449510 LGI1O95970 557 aa11.51□□□□□ -0.57
UBE3B-204ENST00000449510 ATP1B1P05026 303 aa11.51□□□□□ -0.57
UBE3B-204ENST00000449510 HIST1H1TP22492 207 aaPredicted RBP11.51□□□□□ -0.57
UBE3B-204ENST00000449510 SLC6A1P30531 599 aa11.51□□□□□ -0.57
UBE3B-204ENST00000449510 TRHRP34981 398 aaPredicted RBP11.51□□□□□ -0.57
UBE3B-204ENST00000449510 PRSS3P35030 304 aa11.51□□□□□ -0.57
UBE3B-204ENST00000449510 PRLHRP49683 370 aa11.51□□□□□ -0.57
UBE3B-204ENST00000449510 SIRPAP78324 504 aa11.51□□□□□ -0.57
UBE3B-204ENST00000449510 EIF4EBP2Q13542 120 aaPredicted RBP11.51□□□□□ -0.57
UBE3B-204ENST00000449510 C12orf73Q69YU5 71 aa11.51□□□□□ -0.57
UBE3B-204ENST00000449510 TSSK4Q6SA08 328 aa11.51□□□□□ -0.57
UBE3B-204ENST00000449510 BTN2A1Q7KYR7 527 aa11.51□□□□□ -0.57
UBE3B-204ENST00000449510 WNT2BQ93097 391 aa11.51□□□□□ -0.57
UBE3B-204ENST00000449510 ACTRT3Q9BYD9 372 aa11.51□□□□□ -0.57
UBE3B-204ENST00000449510 PPP1R3EQ9H7J1 279 aa11.51□□□□□ -0.57
UBE3B-204ENST00000449510 SLC25A19Q9HC21 320 aa11.51□□□□□ -0.57
UBE3B-204ENST00000449510 SLC6A20Q9NP91 592 aa11.51□□□□□ -0.57
UBE3B-204ENST00000449510 CYSLTR2Q9NS75 346 aa11.51□□□□□ -0.57
UBE3B-204ENST00000449510 ING1Q9UK53 422 aaPredicted RBP11.51□□□□□ -0.57
UBE3B-204ENST00000449510 TPRP12270 2363 aaKnown RBP11.51□□□□□ -0.57
UBE3B-204ENST00000449510 KNTC1P50748 2209 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms