RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 ADGRG3Q86Y34 549 aa17.47■□□□□ 0.39
RPS28-202ENST00000449223 NRMQ8IXM6 262 aa17.47■□□□□ 0.39
RPS28-202ENST00000449223 ZFP62Q8NB50 900 aaPredicted RBP17.47■□□□□ 0.39
RPS28-202ENST00000449223 ELOA3Q8NG57 546 aa17.47■□□□□ 0.39
RPS28-202ENST00000449223 NIPSNAP1Q9BPW8 284 aa17.47■□□□□ 0.39
RPS28-202ENST00000449223 HES7Q9BYE0 225 aa17.47■□□□□ 0.39
RPS28-202ENST00000449223 KIF17Q9P2E2 1029 aa17.47■□□□□ 0.39
RPS28-202ENST00000449223 VDAC3Q9Y277 283 aa17.47■□□□□ 0.39
RPS28-202ENST00000449223 TMEM5Q9Y2B1 443 aa17.47■□□□□ 0.39
RPS28-202ENST00000449223 POFUT2Q9Y2G5 429 aa17.47■□□□□ 0.39
RPS28-202ENST00000449223 CACNA1GO43497 2377 aa17.46■□□□□ 0.39
RPS28-202ENST00000449223 PINLYPA6NC86 204 aa17.46■□□□□ 0.39
RPS28-202ENST00000449223 FAM47E-STBD1D6RA91 191 aa17.46■□□□□ 0.39
RPS28-202ENST00000449223 NPIPB7O75200 414 aa17.46■□□□□ 0.39
RPS28-202ENST00000449223 ZNF17P17021 662 aa17.46■□□□□ 0.39
RPS28-202ENST00000449223 FPR3P25089 353 aa17.46■□□□□ 0.39
RPS28-202ENST00000449223 DPP4P27487 766 aa17.46■□□□□ 0.39
RPS28-202ENST00000449223 GSSP48637 474 aa17.46■□□□□ 0.39
RPS28-202ENST00000449223 RAD23AP54725 363 aa17.46■□□□□ 0.39
RPS28-202ENST00000449223 GPR85P60893 370 aa17.46■□□□□ 0.39
RPS28-202ENST00000449223 EGR4Q05215 589 aa17.46■□□□□ 0.39
RPS28-202ENST00000449223 FOXF1Q12946 379 aa17.46■□□□□ 0.39
RPS28-202ENST00000449223 KCNAB2Q13303 367 aa17.46■□□□□ 0.39
RPS28-202ENST00000449223 NHSL2Q5HYW2 709 aa17.46■□□□□ 0.39
RPS28-202ENST00000449223 ANKRD34AQ69YU3 496 aa17.46■□□□□ 0.39
RPS28-202ENST00000449223 C5orf46Q6UWT4 87 aa17.46■□□□□ 0.39
RPS28-202ENST00000449223 TMPRSS11FQ6ZWK6 438 aa17.46■□□□□ 0.39
RPS28-202ENST00000449223 GTPBP8Q8N3Z3 284 aaPredicted RBP17.46■□□□□ 0.39
RPS28-202ENST00000449223 ZCCHC14Q8WYQ9 949 aaKnown RBP17.46■□□□□ 0.39
RPS28-202ENST00000449223 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.46■□□□□ 0.391e-6■■□□□ 11.9
RPS28-202ENST00000449223 KRT84Q9NSB2 600 aa17.46■□□□□ 0.39
RPS28-202ENST00000449223 NCKAP5O14513 1909 aa17.45■□□□□ 0.38
RPS28-202ENST00000449223 TRAV17A0A0B4J275 112 aa17.45■□□□□ 0.38
RPS28-202ENST00000449223 MKRN2OSH3BPM6 223 aa17.45■□□□□ 0.38
RPS28-202ENST00000449223 ZNF208O43345 1280 aa17.45■□□□□ 0.38
RPS28-202ENST00000449223 ZIC3O60481 467 aa17.45■□□□□ 0.38
RPS28-202ENST00000449223 GLSO94925 669 aaPredicted RBP17.45■□□□□ 0.38
RPS28-202ENST00000449223 WISP1O95388 367 aa17.45■□□□□ 0.38
RPS28-202ENST00000449223 CXCR1P25024 350 aa17.45■□□□□ 0.38
RPS28-202ENST00000449223 FKBP2P26885 142 aaKnown RBP17.45■□□□□ 0.38
RPS28-202ENST00000449223 ELK4P28324 431 aa17.45■□□□□ 0.38
RPS28-202ENST00000449223 MERTKQ12866 999 aa17.45■□□□□ 0.38
RPS28-202ENST00000449223 TSPAN31Q12999 210 aa17.45■□□□□ 0.38
RPS28-202ENST00000449223 PRICKLE2Q7Z3G6 844 aa17.45■□□□□ 0.38
RPS28-202ENST00000449223 GALNTL5Q7Z4T8 443 aa17.45■□□□□ 0.38
RPS28-202ENST00000449223 KDF1Q8NAX2 398 aaPredicted RBP17.45■□□□□ 0.38
RPS28-202ENST00000449223 POC1BQ8TC44 478 aa17.45■□□□□ 0.38
RPS28-202ENST00000449223 GNPDA2Q8TDQ7 276 aa17.45■□□□□ 0.38
RPS28-202ENST00000449223 STK35Q8TDR2 534 aa17.45■□□□□ 0.38
RPS28-202ENST00000449223 NPAS1Q99742 590 aa17.45■□□□□ 0.38
RPS28-202ENST00000449223 TACO1Q9BSH4 297 aaKnown RBP17.45■□□□□ 0.38
RPS28-202ENST00000449223 GABARAPL3Q9BY60 117 aa17.45■□□□□ 0.38
RPS28-202ENST00000449223 ZNF703Q9H7S9 590 aaPredicted RBP17.45■□□□□ 0.38
RPS28-202ENST00000449223 ZNF556Q9HAH1 456 aa17.45■□□□□ 0.38
RPS28-202ENST00000449223 PAPOLBQ9NRJ5 636 aaKnown RBP17.45■□□□□ 0.38
RPS28-202ENST00000449223 CHRNA9Q9UGM1 479 aa17.45■□□□□ 0.38
RPS28-202ENST00000449223 ENOPH1Q9UHY7 261 aa17.45■□□□□ 0.38
RPS28-202ENST00000449223 TMED7-TICAM2A0A0A6YYA0 188 aa17.44■□□□□ 0.38
RPS28-202ENST00000449223 E9PQ18 207 aa17.44■□□□□ 0.38
RPS28-202ENST00000449223 PIP5K1CO60331 668 aa17.44■□□□□ 0.38
RPS28-202ENST00000449223 CDH2P19022 906 aaPredicted RBP17.44■□□□□ 0.38
RPS28-202ENST00000449223 GSTM3P21266 225 aa17.44■□□□□ 0.38
RPS28-202ENST00000449223 TBR1Q16650 682 aa17.44■□□□□ 0.38
RPS28-202ENST00000449223 PFN4Q8NHR9 129 aa17.44■□□□□ 0.38
RPS28-202ENST00000449223 RNF217Q8TC41 542 aa17.44■□□□□ 0.38
RPS28-202ENST00000449223 LIPHQ8WWY8 451 aa17.44■□□□□ 0.38
RPS28-202ENST00000449223 BPIFA2Q96DR5 249 aa17.44■□□□□ 0.38
RPS28-202ENST00000449223 JSRP1Q96MG2 331 aaPredicted RBP17.44■□□□□ 0.38
RPS28-202ENST00000449223 GPA33Q99795 319 aa17.44■□□□□ 0.38
RPS28-202ENST00000449223 OR2B2Q9GZK3 357 aa17.44■□□□□ 0.38
RPS28-202ENST00000449223 C20orf141Q9NUB4 165 aa17.44■□□□□ 0.38
RPS28-202ENST00000449223 QPCTLQ9NXS2 382 aa17.44■□□□□ 0.38
RPS28-202ENST00000449223 B4GALT7Q9UBV7 327 aa17.44■□□□□ 0.38
RPS28-202ENST00000449223 TMED7Q9Y3B3 224 aa17.44■□□□□ 0.38
RPS28-202ENST00000449223 LRRC42Q9Y546 428 aa17.44■□□□□ 0.38
RPS28-202ENST00000449223 ORC6Q9Y5N6 252 aa17.44■□□□□ 0.38
RPS28-202ENST00000449223 CSAG2Q9Y5P2 127 aa17.44■□□□□ 0.38
RPS28-202ENST00000449223 A8MVM7 634 aa17.43■□□□□ 0.38
RPS28-202ENST00000449223 SNAP29O95721 258 aa17.43■□□□□ 0.38
RPS28-202ENST00000449223 RFPL3SP0C7P2 107 aa17.43■□□□□ 0.38
RPS28-202ENST00000449223 FOXD4Q12950 439 aaPredicted RBP17.43■□□□□ 0.38
RPS28-202ENST00000449223 KLHL17Q6TDP4 642 aa17.43■□□□□ 0.38
RPS28-202ENST00000449223 ZADH2Q8N4Q0 377 aa17.43■□□□□ 0.38
RPS28-202ENST00000449223 TTTY12Q9BZ98 90 aa17.43■□□□□ 0.38
RPS28-202ENST00000449223 UCK2Q9BZX2 261 aa17.43■□□□□ 0.38
RPS28-202ENST00000449223 KLHL1Q9NR64 748 aa17.43■□□□□ 0.38
RPS28-202ENST00000449223 REV1Q9UBZ9 1251 aa17.43■□□□□ 0.38
RPS28-202ENST00000449223 DKKL1Q9UK85 242 aa17.43■□□□□ 0.38
RPS28-202ENST00000449223 RAB26Q9ULW5 256 aa17.43■□□□□ 0.38
RPS28-202ENST00000449223 ENO4A6NNW6 628 aa17.42■□□□□ 0.38
RPS28-202ENST00000449223 SUSD5O60279 629 aa17.42■□□□□ 0.38
RPS28-202ENST00000449223 FZD7O75084 574 aa17.42■□□□□ 0.38
RPS28-202ENST00000449223 HPNP05981 417 aa17.42■□□□□ 0.38
RPS28-202ENST00000449223 IFI30P13284 250 aa17.42■□□□□ 0.38
RPS28-202ENST00000449223 HK1P19367 917 aa17.42■□□□□ 0.38
RPS28-202ENST00000449223 CD97P48960 835 aa17.42■□□□□ 0.38
RPS28-202ENST00000449223 MEOX1P50221 254 aa17.42■□□□□ 0.38
RPS28-202ENST00000449223 SELENBP1Q13228 472 aa17.42■□□□□ 0.38
RPS28-202ENST00000449223 C3orf33Q6P1S2 294 aa17.42■□□□□ 0.38
RPS28-202ENST00000449223 CDK20Q8IZL9 346 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms