RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 GANABQ14697 944 aaKnown RBP12.35□□□□□ -0.43
PDLIM2-213ENST00000448520 NDUFAF6Q330K2 333 aa12.35□□□□□ -0.43
PDLIM2-213ENST00000448520 LRRC23Q53EV4 343 aaPredicted RBP12.35□□□□□ -0.43
PDLIM2-213ENST00000448520 COMTD1Q86VU5 262 aa12.35□□□□□ -0.43
PDLIM2-213ENST00000448520 CXorf67Q86X51 503 aaPredicted RBP12.35□□□□□ -0.43
PDLIM2-213ENST00000448520 VRK2Q86Y07 508 aa12.35□□□□□ -0.43
PDLIM2-213ENST00000448520 P3H2Q8IVL5 708 aa12.35□□□□□ -0.43
PDLIM2-213ENST00000448520 ZNF614Q8N883 585 aa12.35□□□□□ -0.43
PDLIM2-213ENST00000448520 BBS10Q8TAM1 723 aa12.35□□□□□ -0.43
PDLIM2-213ENST00000448520 TAMM41Q96BW9 452 aa12.35□□□□□ -0.43
PDLIM2-213ENST00000448520 SAP130Q9H0E3 1048 aa12.35□□□□□ -0.43
PDLIM2-213ENST00000448520 PTGES2Q9H7Z7 377 aa12.35□□□□□ -0.43
PDLIM2-213ENST00000448520 THUMPD1Q9NXG2 353 aaKnown RBP12.35□□□□□ -0.43
PDLIM2-213ENST00000448520 PPP4R1LQ9P1A2 415 aa12.35□□□□□ -0.43
PDLIM2-213ENST00000448520 SLC7A8Q9UHI5 535 aa12.35□□□□□ -0.43
PDLIM2-213ENST00000448520 MRTO4Q9UKD2 239 aaKnown RBP12.35□□□□□ -0.43
PDLIM2-213ENST00000448520 TESMINQ9Y4I5 508 aa12.35□□□□□ -0.43
PDLIM2-213ENST00000448520 HEATR5AQ86XA9 2040 aa12.34□□□□□ -0.43
PDLIM2-213ENST00000448520 A0A1W2PPR1 153 aa12.34□□□□□ -0.43
PDLIM2-213ENST00000448520 TMEM247A6NEH6 219 aa12.34□□□□□ -0.43
PDLIM2-213ENST00000448520 SLC22A20A6NK97 555 aa12.34□□□□□ -0.43
PDLIM2-213ENST00000448520 M0QX08 132 aa12.34□□□□□ -0.43
PDLIM2-213ENST00000448520 OIP5O43482 229 aa12.34□□□□□ -0.43
PDLIM2-213ENST00000448520 TPST1O60507 370 aa12.34□□□□□ -0.43
PDLIM2-213ENST00000448520 SMNDC1O75940 238 aaKnown RBP eCLIP12.34□□□□□ -0.43
PDLIM2-213ENST00000448520 OXSR1O95747 527 aaPredicted RBP12.34□□□□□ -0.43
PDLIM2-213ENST00000448520 FPR1P21462 350 aa12.34□□□□□ -0.43
PDLIM2-213ENST00000448520 EVI2BP34910 448 aa12.34□□□□□ -0.43
PDLIM2-213ENST00000448520 CD79BP40259 229 aa12.34□□□□□ -0.43
PDLIM2-213ENST00000448520 CLK3P49761 638 aaKnown RBP12.34□□□□□ -0.43
PDLIM2-213ENST00000448520 B3GALT5-AS1P59052 145 aa12.34□□□□□ -0.43
PDLIM2-213ENST00000448520 PLAURQ03405 335 aa12.34□□□□□ -0.43
PDLIM2-213ENST00000448520 DMTNQ08495 405 aa12.34□□□□□ -0.43
PDLIM2-213ENST00000448520 CD226Q15762 336 aa12.34□□□□□ -0.43
PDLIM2-213ENST00000448520 FXNQ16595 210 aa12.34□□□□□ -0.43
PDLIM2-213ENST00000448520 GLYR1Q49A26 553 aaPredicted RBP12.34□□□□□ -0.43
PDLIM2-213ENST00000448520 GLIPR1L2Q4G1C9 344 aa12.34□□□□□ -0.43
PDLIM2-213ENST00000448520 PDZK1Q5T2W1 519 aa12.34□□□□□ -0.43
PDLIM2-213ENST00000448520 GLYATQ6IB77 296 aa12.34□□□□□ -0.43
PDLIM2-213ENST00000448520 PRSS57Q6UWY2 283 aa12.34□□□□□ -0.43
PDLIM2-213ENST00000448520 PLXDC2Q6UX71 529 aa12.34□□□□□ -0.43
PDLIM2-213ENST00000448520 CYP2R1Q6VVX0 501 aa12.34□□□□□ -0.43
PDLIM2-213ENST00000448520 ZNF771Q7L3S4 317 aaPredicted RBP12.34□□□□□ -0.43
PDLIM2-213ENST00000448520 MARCH3Q86UD3 253 aa12.34□□□□□ -0.43
PDLIM2-213ENST00000448520 ARHGAP24Q8N264 748 aa12.34□□□□□ -0.43
PDLIM2-213ENST00000448520 CNEP1R1Q8N9A8 125 aa12.34□□□□□ -0.43
PDLIM2-213ENST00000448520 FADS6Q8N9I5 356 aa12.34□□□□□ -0.43
PDLIM2-213ENST00000448520 SMYD1Q8NB12 490 aa12.34□□□□□ -0.43
PDLIM2-213ENST00000448520 WFIKKN1Q96NZ8 548 aa12.34□□□□□ -0.43
PDLIM2-213ENST00000448520 DSN1Q9H410 356 aa12.34□□□□□ -0.43
PDLIM2-213ENST00000448520 BCL2L10Q9HD36 194 aa12.34□□□□□ -0.43
PDLIM2-213ENST00000448520 STOML1Q9UBI4 398 aa12.34□□□□□ -0.43
PDLIM2-213ENST00000448520 ABCG2Q9UNQ0 655 aa12.34□□□□□ -0.43
PDLIM2-213ENST00000448520 SNX13Q9Y5W8 968 aa12.34□□□□□ -0.43
PDLIM2-213ENST00000448520 V9GYQ6 96 aa12.34□□□□□ -0.43
PDLIM2-213ENST00000448520 A0A0G2JPF8 293 aa12.33□□□□□ -0.44
PDLIM2-213ENST00000448520 AGAP5A6NIR3 686 aa12.33□□□□□ -0.44
PDLIM2-213ENST00000448520 HNRNPCL2B2RXH8 293 aa12.33□□□□□ -0.44
PDLIM2-213ENST00000448520 HNRNPCL3B7ZW38 293 aa12.33□□□□□ -0.44
PDLIM2-213ENST00000448520 C16orf97H3BN30 126 aa12.33□□□□□ -0.44
PDLIM2-213ENST00000448520 FADS1O60427 444 aa12.33□□□□□ -0.44
PDLIM2-213ENST00000448520 SMPD2O60906 423 aa12.33□□□□□ -0.44
PDLIM2-213ENST00000448520 SOX30O94993 753 aa12.33□□□□□ -0.44
PDLIM2-213ENST00000448520 MFN2O95140 757 aa12.33□□□□□ -0.44
PDLIM2-213ENST00000448520 HNRNPCL4P0DMR1 293 aa12.33□□□□□ -0.44
PDLIM2-213ENST00000448520 HK1P19367 917 aa12.33□□□□□ -0.44
PDLIM2-213ENST00000448520 RPS4Y1P22090 263 aaKnown RBP12.33□□□□□ -0.44
PDLIM2-213ENST00000448520 CRYGSP22914 178 aa12.33□□□□□ -0.44
PDLIM2-213ENST00000448520 KIR2DL2P43627 348 aaPredicted RBP12.33□□□□□ -0.44
PDLIM2-213ENST00000448520 ATP12AP54707 1039 aa12.33□□□□□ -0.44
PDLIM2-213ENST00000448520 PSMD4P55036 377 aaKnown RBP12.33□□□□□ -0.44
PDLIM2-213ENST00000448520 VEZF1Q14119 521 aa12.33□□□□□ -0.44
PDLIM2-213ENST00000448520 ZNF141Q15928 474 aa12.33□□□□□ -0.44
PDLIM2-213ENST00000448520 CLEC9AQ6UXN8 241 aa12.33□□□□□ -0.44
PDLIM2-213ENST00000448520 ZNF836Q6ZNA1 936 aa12.33□□□□□ -0.44
PDLIM2-213ENST00000448520 BTLAQ7Z6A9 289 aa12.33□□□□□ -0.44
PDLIM2-213ENST00000448520 KRTAP1-3Q8IUG1 177 aa12.33□□□□□ -0.44
PDLIM2-213ENST00000448520 METTL25Q8N6Q8 603 aa12.33□□□□□ -0.44
PDLIM2-213ENST00000448520 FAM86B1Q8N7N1 296 aa12.33□□□□□ -0.44
PDLIM2-213ENST00000448520 OR2M3Q8NG83 312 aa12.33□□□□□ -0.44
PDLIM2-213ENST00000448520 GPR32P1Q8NGA4 272 aa12.33□□□□□ -0.44
PDLIM2-213ENST00000448520 OR52P1PQ8NH57 321 aa12.33□□□□□ -0.44
PDLIM2-213ENST00000448520 FAM162AQ96A26 154 aa12.33□□□□□ -0.44
PDLIM2-213ENST00000448520 KLHDC3Q9BQ90 382 aa12.33□□□□□ -0.44
PDLIM2-213ENST00000448520 PIGQQ9BRB3 760 aa12.33□□□□□ -0.44
PDLIM2-213ENST00000448520 MED18Q9BUE0 208 aa12.33□□□□□ -0.44
PDLIM2-213ENST00000448520 HHATLQ9HCP6 504 aa12.33□□□□□ -0.44
PDLIM2-213ENST00000448520 POLE3Q9NRF9 147 aa12.33□□□□□ -0.44
PDLIM2-213ENST00000448520 CALML5Q9NZT1 146 aa12.33□□□□□ -0.44
PDLIM2-213ENST00000448520 POMPQ9Y244 141 aa12.33□□□□□ -0.44
PDLIM2-213ENST00000448520 ZNF443Q9Y2A4 671 aaPredicted RBP12.33□□□□□ -0.44
PDLIM2-213ENST00000448520 ZNF175Q9Y473 711 aa12.33□□□□□ -0.44
PDLIM2-213ENST00000448520 CHST2Q9Y4C5 530 aa12.33□□□□□ -0.44
PDLIM2-213ENST00000448520 GPC6Q9Y625 555 aaPredicted RBP12.33□□□□□ -0.44
PDLIM2-213ENST00000448520 CSPG4Q6UVK1 2322 aa12.33□□□□□ -0.44
PDLIM2-213ENST00000448520 TMEM229AB2RXF0 380 aa12.32□□□□□ -0.44
PDLIM2-213ENST00000448520 B4DXG7 233 aa12.32□□□□□ -0.44
PDLIM2-213ENST00000448520 ACOT8O14734 319 aa12.32□□□□□ -0.44
PDLIM2-213ENST00000448520 GMFGO60234 142 aa12.32□□□□□ -0.44
PDLIM2-213ENST00000448520 SERPINA1P01009 418 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms