RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 SLC2A2P11168 524 aaPredicted RBP13.6□□□□□ -0.23
SF1-211ENST00000448404 BCKDHBP21953 392 aa13.6□□□□□ -0.23
SF1-211ENST00000448404 CD38P28907 300 aa13.6□□□□□ -0.23
SF1-211ENST00000448404 CAPZBP47756 277 aa13.6□□□□□ -0.23
SF1-211ENST00000448404 LCN6P62502 163 aa13.6□□□□□ -0.23
SF1-211ENST00000448404 ARMC4Q5T2S8 1044 aa13.6□□□□□ -0.23
SF1-211ENST00000448404 MEPCEQ7L2J0 689 aaKnown RBP13.6□□□□□ -0.23
SF1-211ENST00000448404 GJD3Q8N144 294 aa13.6□□□□□ -0.23
SF1-211ENST00000448404 ACBD7Q8N6N7 88 aa13.6□□□□□ -0.23
SF1-211ENST00000448404 FAM98AQ8NCA5 519 aaKnown RBP13.6□□□□□ -0.23
SF1-211ENST00000448404 FAM174AQ8TBP5 190 aa13.6□□□□□ -0.23
SF1-211ENST00000448404 NMNAT3Q96T66 252 aa13.6□□□□□ -0.23
SF1-211ENST00000448404 OR10A5Q9H207 317 aa13.6□□□□□ -0.23
SF1-211ENST00000448404 ANKRD19PQ9H560 264 aa13.6□□□□□ -0.23
SF1-211ENST00000448404 SP140LQ9H930 580 aa13.6□□□□□ -0.23
SF1-211ENST00000448404 B3GAT2Q9NPZ5 323 aa13.6□□□□□ -0.23
SF1-211ENST00000448404 N6AMT1Q9Y5N5 214 aa13.6□□□□□ -0.23
SF1-211ENST00000448404 A3GALT2U3KPV4 340 aa13.6□□□□□ -0.23
SF1-211ENST00000448404 A0A1B0GVT2 93 aa13.6□□□□□ -0.23
SF1-211ENST00000448404 KHNYNO15037 678 aaKnown RBP13.6□□□□□ -0.23
SF1-211ENST00000448404 MBTPS2O43462 519 aa13.6□□□□□ -0.23
SF1-211ENST00000448404 DRD5P21918 477 aa13.6□□□□□ -0.23
SF1-211ENST00000448404 GABRA5P31644 462 aa13.6□□□□□ -0.23
SF1-211ENST00000448404 PYCR1P32322 319 aa13.6□□□□□ -0.23
SF1-211ENST00000448404 PSMB10P40306 273 aa13.6□□□□□ -0.23
SF1-211ENST00000448404 GPR3P46089 330 aa13.6□□□□□ -0.23
SF1-211ENST00000448404 GARNL3Q5VVW2 1013 aa13.6□□□□□ -0.23
SF1-211ENST00000448404 MTFR2Q6P444 385 aa13.6□□□□□ -0.23
SF1-211ENST00000448404 CNIH2Q6PI25 160 aa13.6□□□□□ -0.23
SF1-211ENST00000448404 BRIX1Q8TDN6 353 aaKnown RBP13.6□□□□□ -0.23
SF1-211ENST00000448404 FOXN4Q96NZ1 517 aa13.6□□□□□ -0.23
SF1-211ENST00000448404 SATB2Q9UPW6 733 aa13.6□□□□□ -0.23
SF1-211ENST00000448404 TP53BP1Q12888 1972 aaPredicted RBP13.6□□□□□ -0.23
SF1-211ENST00000448404 CCDC182A6NF36 153 aa13.6□□□□□ -0.23
SF1-211ENST00000448404 SNTNA6NMZ2 147 aa13.6□□□□□ -0.23
SF1-211ENST00000448404 C17orf105B2RV13 164 aa13.6□□□□□ -0.23
SF1-211ENST00000448404 CD1CP29017 333 aa13.6□□□□□ -0.23
SF1-211ENST00000448404 CCR5P51681 352 aa13.6□□□□□ -0.23
SF1-211ENST00000448404 ERVK-25P63136 954 aa13.6□□□□□ -0.23
SF1-211ENST00000448404 IDNKQ5T6J7 187 aa13.6□□□□□ -0.23
SF1-211ENST00000448404 TUBA3EQ6PEY2 450 aa13.6□□□□□ -0.23
SF1-211ENST00000448404 MED25Q71SY5 747 aa13.6□□□□□ -0.23
SF1-211ENST00000448404 LNX2Q8N448 690 aa13.6□□□□□ -0.23
SF1-211ENST00000448404 ELF4Q99607 663 aaPredicted RBP13.6□□□□□ -0.23
SF1-211ENST00000448404 C11orf54Q9H0W9 315 aaPredicted RBP13.6□□□□□ -0.23
SF1-211ENST00000448404 IGHV3-20A0A0C4DH32 117 aa13.59□□□□□ -0.23
SF1-211ENST00000448404 OR5K4A6NMS3 321 aa13.59□□□□□ -0.23
SF1-211ENST00000448404 BLOC1S5-TXNDC5H3BN57 136 aa13.59□□□□□ -0.23
SF1-211ENST00000448404 PTP4A3O75365 173 aa13.59□□□□□ -0.23
SF1-211ENST00000448404 GPANK1O95872 356 aa13.59□□□□□ -0.23
SF1-211ENST00000448404 IGHA1P01876 353 aa13.59□□□□□ -0.23
SF1-211ENST00000448404 TFP02787 698 aa13.59□□□□□ -0.23
SF1-211ENST00000448404 RPL4P36578 427 aaKnown RBP13.59□□□□□ -0.23
SF1-211ENST00000448404 RAB25P57735 213 aa13.59□□□□□ -0.23
SF1-211ENST00000448404 MRPS15P82914 257 aaKnown RBP13.59□□□□□ -0.23
SF1-211ENST00000448404 CFHR1Q03591 330 aa13.59□□□□□ -0.23
SF1-211ENST00000448404 ZNHIT3Q15649 155 aaPredicted RBP13.59□□□□□ -0.23
SF1-211ENST00000448404 SYT13Q7L8C5 426 aa13.59□□□□□ -0.23
SF1-211ENST00000448404 C10orf53Q8N6V4 93 aa13.59□□□□□ -0.23
SF1-211ENST00000448404 IL17RDQ8NFM7 739 aa13.59□□□□□ -0.23
SF1-211ENST00000448404 OR4C6Q8NH72 309 aa13.59□□□□□ -0.23
SF1-211ENST00000448404 MOSPD2Q8NHP6 518 aa13.59□□□□□ -0.23
SF1-211ENST00000448404 NXF5Q9H1B4 397 aaKnown RBP13.59□□□□□ -0.23
SF1-211ENST00000448404 C10orf142B7Z368 130 aa13.59□□□□□ -0.23
SF1-211ENST00000448404 J3QRE1 110 aa13.59□□□□□ -0.23
SF1-211ENST00000448404 GTPBP1O00178 669 aaKnown RBP13.59□□□□□ -0.23
SF1-211ENST00000448404 IL1AP01583 271 aa13.59□□□□□ -0.23
SF1-211ENST00000448404 HMGN1P05114 100 aa13.59□□□□□ -0.23
SF1-211ENST00000448404 PRKCAP17252 672 aa13.59□□□□□ -0.23
SF1-211ENST00000448404 ZNF85Q03923 595 aa13.59□□□□□ -0.23
SF1-211ENST00000448404 DMWDQ09019 674 aa13.59□□□□□ -0.23
SF1-211ENST00000448404 CDK20Q8IZL9 346 aa13.59□□□□□ -0.23
SF1-211ENST00000448404 PRRG3Q9BZD7 231 aa13.59□□□□□ -0.23
SF1-211ENST00000448404 ADGRL4Q9HBW9 690 aa13.59□□□□□ -0.23
SF1-211ENST00000448404 GPR27Q9NS67 375 aa13.59□□□□□ -0.23
SF1-211ENST00000448404 EXOGQ9Y2C4 368 aaKnown RBP13.59□□□□□ -0.23
SF1-211ENST00000448404 ANKRD61A6NGH8 418 aa13.58□□□□□ -0.24
SF1-211ENST00000448404 AKAP8O43823 692 aaKnown RBP13.58□□□□□ -0.24
SF1-211ENST00000448404 SELENOFO60613 162 aa13.58□□□□□ -0.24
SF1-211ENST00000448404 CTNSO60931 367 aa13.58□□□□□ -0.24
SF1-211ENST00000448404 GLYR1Q49A26 553 aaPredicted RBP13.58□□□□□ -0.24
SF1-211ENST00000448404 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.58□□□□□ -0.24
SF1-211ENST00000448404 TSSK4Q6SA08 328 aa13.58□□□□□ -0.24
SF1-211ENST00000448404 ESPNLQ6ZVH7 1005 aa13.58□□□□□ -0.24
SF1-211ENST00000448404 ZSCAN1Q8NBB4 408 aa13.58□□□□□ -0.24
SF1-211ENST00000448404 OR6K6Q8NGW6 343 aa13.58□□□□□ -0.24
SF1-211ENST00000448404 SMPDL3BQ92485 455 aa13.58□□□□□ -0.24
SF1-211ENST00000448404 MOGAT1Q96PD6 335 aa13.58□□□□□ -0.24
SF1-211ENST00000448404 ADOQ96SZ5 270 aa13.58□□□□□ -0.24
SF1-211ENST00000448404 ATF6BQ99941 703 aa13.58□□□□□ -0.24
SF1-211ENST00000448404 TEX12Q9BXU0 123 aa13.58□□□□□ -0.24
SF1-211ENST00000448404 CMC2Q9NRP2 79 aa13.58□□□□□ -0.24
SF1-211ENST00000448404 ASB6Q9NWX5 421 aa13.58□□□□□ -0.24
SF1-211ENST00000448404 RNF215Q9Y6U7 377 aa13.58□□□□□ -0.24
SF1-211ENST00000448404 ISPDA4D126 451 aa13.58□□□□□ -0.24
SF1-211ENST00000448404 TMEM150CB9EJG8 249 aa13.58□□□□□ -0.24
SF1-211ENST00000448404 RNF13O43567 381 aa13.58□□□□□ -0.24
SF1-211ENST00000448404 CHP2O43745 196 aa13.58□□□□□ -0.24
SF1-211ENST00000448404 CLPSP04118 112 aa13.58□□□□□ -0.24
SF1-211ENST00000448404 F13BP05160 661 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms